RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 ATP6V0CP27449 155 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 HSD11B1P28845 292 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 ALDH3A1P30838 453 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 REG1BP48304 166 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 POLR2JP52435 117 aaKnown RBP2.15□□□□□ -2.07
SNHG1-222ENST00000545308 EDDM3BP56851 147 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 FABP5Q01469 135 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 JOSD1Q15040 202 aaPredicted RBP2.15□□□□□ -2.07
SNHG1-222ENST00000545308 CLVS2Q5SYC1 327 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 C1orf195Q5TG92 126 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 SMARCD3Q6STE5 483 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 SCXQ7RTU7 201 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 GID4Q8IVV7 300 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 BAP18Q8IXM2 172 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 IFT20Q8IY31 132 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 OR6V1Q8N148 313 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 Q8NAQ8 132 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 OR52L1Q8NGH7 329 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 Q8WTZ3 238 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 CARHSP1Q9Y2V2 147 aaKnown RBP2.15□□□□□ -2.07
SNHG1-222ENST00000545308 LINC00312Q9Y6C7 94 aa2.15□□□□□ -2.07
SNHG1-222ENST00000545308 KMT2AQ03164 3969 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 HERC2O95714 4834 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 IGKV1D-17A0A075B6S4 117 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 TRGV10A0A0A0MS01 117 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 A0A1B0GU33 70 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 ZNF878C9JN71 531 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 BUB1B-PAK6H3BSN5 160 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 I3L521 148 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 M0R381 172 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 UBE2L6O14933 153 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 DENRO43583 198 aaKnown RBP2.14□□□□□ -2.07
SNHG1-222ENST00000545308 GSTZ1O43708 216 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-222ENST00000545308 SYNGR2O43760 224 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 SLC25A20O43772 301 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 CYB5AP00167 134 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 IGLV1-51P01701 117 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 BPGMP07738 259 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 ERP29P30040 261 aaKnown RBP2.14□□□□□ -2.07
SNHG1-222ENST00000545308 OMPP47874 163 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 CDC42P60953 191 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 HLA-DRB3P79483 266 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 PRB3Q04118 309 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-222ENST00000545308 TNFRSF9Q07011 255 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 AMMECR1LQ6DCA0 310 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 TRAPPC6BQ86SZ2 158 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 ANGPTL5Q86XS5 388 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 Q8IYB0 196 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 HS3ST5Q8IZT8 346 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 C4orf33Q8N1A6 199 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 DYNAPQ8N1N2 210 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 EIF4E3Q8N5X7 224 aaKnown RBP2.14□□□□□ -2.07
SNHG1-222ENST00000545308 TCTEX1D1Q8N7M0 179 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 C5orf56Q8N8D9 126 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 OR2T10Q8NGZ9 312 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 OR5P3Q8WZ94 311 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 TMEM106AQ96A25 262 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 WFDC6Q9BQY6 131 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 TMEM109Q9BVC6 243 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 OR51V1Q9H2C8 321 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 OR51I2Q9H344 312 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 C19orf12Q9NSK7 152 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 LHFPL6Q9Y693 200 aa2.14□□□□□ -2.07
SNHG1-222ENST00000545308 SRRM2Q9UQ35 2752 aaKnown RBP2.14□□□□□ -2.07
SNHG1-222ENST00000545308 HUWE1Q7Z6Z7 4374 aaKnown RBP2.13□□□□□ -2.07
SNHG1-222ENST00000545308 A8MWP6 167 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 CCL3L1P16619 93 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 PSMB8P28062 276 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 DDTP30046 118 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 OR10J1P30954 320 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 SMIM11AP58511 58 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 SELENOWP63302 87 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 MRPS25P82663 173 aaKnown RBP2.13□□□□□ -2.07
SNHG1-222ENST00000545308 PRDX4Q13162 271 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 KRR1Q13601 381 aaKnown RBP2.13□□□□□ -2.07
SNHG1-222ENST00000545308 DEFB136Q30KP8 78 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 PYDC2Q56P42 97 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 GLYATL3Q5SZD4 288 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 OR10K2Q6IF99 312 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 C10orf99Q6UWK7 81 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 HEPN1Q6WQI6 88 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 RPP25LQ8N5L8 163 aaKnown RBP2.13□□□□□ -2.07
SNHG1-222ENST00000545308 OR2T4Q8NH00 348 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 PFN4Q8NHR9 129 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 ANP32BQ92688 251 aaKnown RBP2.13□□□□□ -2.07
SNHG1-222ENST00000545308 Q96M85 177 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 MGLLQ99685 303 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 CST11Q9H112 138 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 HES4Q9HCC6 221 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 SLC2A9Q9NRM0 540 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 SLC22A13Q9Y226 551 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 FAM32AQ9Y421 112 aaKnown RBP2.13□□□□□ -2.07
SNHG1-222ENST00000545308 IER3IP1Q9Y5U9 82 aa2.13□□□□□ -2.07
SNHG1-222ENST00000545308 PLECQ15149 4684 aaKnown RBP2.13□□□□□ -2.07
SNHG1-222ENST00000545308 TRAV27A0A087WT01 109 aa2.12□□□□□ -2.07
SNHG1-222ENST00000545308 IGSF23A1L1A6 192 aa2.12□□□□□ -2.07
SNHG1-222ENST00000545308 OR11H12B2RN74 326 aa2.12□□□□□ -2.07
SNHG1-222ENST00000545308 H7C1C5 153 aa2.12□□□□□ -2.07
SNHG1-222ENST00000545308 IFNA21P01568 189 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms