RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 RXFP4Q8TDU9 374 aa8.41□□□□□ -1.06
HDAC4-216ENST00000544989 PYGO2Q9BRQ0 406 aa8.41□□□□□ -1.06
HDAC4-216ENST00000544989 RBAKDNA6NC62 111 aa8.4□□□□□ -1.06
HDAC4-216ENST00000544989 OR10J4P0C629 311 aa8.4□□□□□ -1.06
HDAC4-216ENST00000544989 HTN1P15515 57 aa8.4□□□□□ -1.06
HDAC4-216ENST00000544989 SERF2P84101 59 aa8.4□□□□□ -1.06
HDAC4-216ENST00000544989 EXOC3-AS1Q8N2X6 119 aa8.4□□□□□ -1.06
HDAC4-216ENST00000544989 ARL6IP6Q8N6S5 226 aa8.4□□□□□ -1.06
HDAC4-216ENST00000544989 C15orf53Q8NAA6 179 aa8.4□□□□□ -1.06
HDAC4-216ENST00000544989 OR2G3Q8NGZ4 309 aa8.4□□□□□ -1.06
HDAC4-216ENST00000544989 RNASE8Q8TDE3 154 aaKnown RBP8.4□□□□□ -1.06
HDAC4-216ENST00000544989 PSMG3Q9BT73 122 aaPredicted RBP8.4□□□□□ -1.06
HDAC4-216ENST00000544989 WFDC1Q9HC57 220 aa8.4□□□□□ -1.06
HDAC4-216ENST00000544989 BORCS7-ASMTA0A0B4J1R7 106 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 C7orf71A4D174 169 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 SNURFLB1AK76 121 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 KLLNB2CW77 178 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 GPX1P07203 203 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 CRISP2P16562 243 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 FAM122CQ6P4D5 195 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 ZNF680Q8NEM1 530 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 LINC00467Q9BRT7 94 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 AGPAT4-IT1Q9H0P7 198 aa8.39□□□□□ -1.07
HDAC4-216ENST00000544989 TRAV12-3A0A0B4J271 114 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 PLAC8L1A1L4L8 177 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 CBY3A6NI87 242 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 ATP5G1P05496 136 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 DEFB130BP0DP73 79 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 DEFB130AP0DP74 79 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 HTN3P15516 51 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 AZU1P20160 251 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 ATP5G3P48201 142 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 RANP62826 216 aaKnown RBP8.38□□□□□ -1.07
HDAC4-216ENST00000544989 OR10G4Q8NGN3 311 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 OR10G9Q8NGN4 311 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 OR10G7Q8NGN6 311 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 OR2T35Q8NGX2 323 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 CMTM2Q8TAZ6 248 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 GNPNAT1Q96EK6 184 aaPredicted RBP8.38□□□□□ -1.07
HDAC4-216ENST00000544989 PHYHIPLQ96FC7 376 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 FAM19A4Q96LR4 140 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 Q9H3A6 140 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 OTORQ9NRC9 128 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 ZNF492Q9P255 531 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 LENEPQ9Y5L5 61 aa8.38□□□□□ -1.07
HDAC4-216ENST00000544989 IGKV2-40A0A087WW87 121 aaPredicted RBP8.37□□□□□ -1.07
HDAC4-216ENST00000544989 FXYD6-FXYD2A0A087WZ82 144 aa8.37□□□□□ -1.07
HDAC4-216ENST00000544989 J3KRW8 73 aa8.37□□□□□ -1.07
HDAC4-216ENST00000544989 IGKV2D-40P01614 121 aaPredicted RBP8.37□□□□□ -1.07
HDAC4-216ENST00000544989 CDC34P49427 236 aaPredicted RBP8.37□□□□□ -1.07
HDAC4-216ENST00000544989 ZNF138P52744 262 aa8.37□□□□□ -1.07
HDAC4-216ENST00000544989 ERCC8Q13216 396 aa8.37□□□□□ -1.07
HDAC4-216ENST00000544989 ANXA2RQ3ZCQ2 193 aa8.37□□□□□ -1.07
HDAC4-216ENST00000544989 POM121L12Q8N7R1 296 aa8.37□□□□□ -1.07
HDAC4-216ENST00000544989 HSD17B11Q8NBQ5 300 aa8.37□□□□□ -1.07
HDAC4-216ENST00000544989 TMED6Q8WW62 240 aa8.37□□□□□ -1.07
HDAC4-216ENST00000544989 ZNF503Q96F45 646 aa8.37□□□□□ -1.07
HDAC4-216ENST00000544989 NOP10Q9NPE3 64 aaKnown RBP8.37□□□□□ -1.07
HDAC4-216ENST00000544989 TAAR5O14804 337 aa8.36□□□□□ -1.07
HDAC4-216ENST00000544989 ZNF324O75467 553 aaPredicted RBP8.36□□□□□ -1.07
HDAC4-216ENST00000544989 PRM2P04554 102 aa8.36□□□□□ -1.07
HDAC4-216ENST00000544989 PRB4P10163 310 aaPredicted RBP8.36□□□□□ -1.07
HDAC4-216ENST00000544989 RNASE4P34096 147 aaKnown RBP8.36□□□□□ -1.07
HDAC4-216ENST00000544989 FAM3BP58499 235 aaPredicted RBP8.36□□□□□ -1.07
HDAC4-216ENST00000544989 RAB2AP61019 212 aa8.36□□□□□ -1.07
HDAC4-216ENST00000544989 DAZ2Q13117 558 aaKnown RBP8.36□□□□□ -1.07
HDAC4-216ENST00000544989 KIR3DS1Q14943 382 aa8.36□□□□□ -1.07
HDAC4-216ENST00000544989 RNF212Q495C1 297 aa8.36□□□□□ -1.07
HDAC4-216ENST00000544989 EIF4E3Q8N5X7 224 aaKnown RBP8.36□□□□□ -1.07
HDAC4-216ENST00000544989 VGLL1Q99990 258 aa8.36□□□□□ -1.07
HDAC4-216ENST00000544989 TNFSF18Q9UNG2 199 aa8.36□□□□□ -1.07
HDAC4-216ENST00000544989 SERTM2A0A1B0GWG4 89 aa8.35□□□□□ -1.07
HDAC4-216ENST00000544989 DIRC3C9JPN6 131 aa8.35□□□□□ -1.07
HDAC4-216ENST00000544989 RGS13O14921 159 aa8.35□□□□□ -1.07
HDAC4-216ENST00000544989 ATP6V0CP27449 155 aa8.35□□□□□ -1.07
HDAC4-216ENST00000544989 TMEM88Q6PEY1 159 aa8.35□□□□□ -1.07
HDAC4-216ENST00000544989 UBE2DNLQ8IWF7 75 aa8.35□□□□□ -1.07
HDAC4-216ENST00000544989 LINC00612Q8N6U2 182 aa8.35□□□□□ -1.07
HDAC4-216ENST00000544989 ACTR3CQ9C0K3 210 aaPredicted RBP8.35□□□□□ -1.07
HDAC4-216ENST00000544989 PLA2G2EQ9NZK7 142 aa8.35□□□□□ -1.07
HDAC4-216ENST00000544989 ABCA13Q86UQ4 5058 aa8.35□□□□□ -1.07
HDAC4-216ENST00000544989 VPS13DQ5THJ4 4388 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 RNF222A6NCQ9 220 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 PGPA6NDG6 321 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 F5H768 121 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 K7EQM0 130 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 STAG3L2P0CL84 134 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 STAG3L3P0CL85 134 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 BTN1A1Q13410 526 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 Q5BKY6 102 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 IBA57Q5T440 356 aaKnown RBP8.34□□□□□ -1.07
HDAC4-216ENST00000544989 ZFAND2AQ8N6M9 145 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 ST6GAL2Q96JF0 529 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 ARPC5LQ9BPX5 153 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 TMEM167BQ9NRX6 74 aa8.34□□□□□ -1.07
HDAC4-216ENST00000544989 IGHV1OR15-1A0A075B7D0 117 aa8.33□□□□□ -1.08
HDAC4-216ENST00000544989 CXorf1O96002 111 aa8.33□□□□□ -1.08
HDAC4-216ENST00000544989 ARL14EPLP0DKL9 152 aa8.33□□□□□ -1.08
HDAC4-216ENST00000544989 CD300CQ08708 224 aa8.33□□□□□ -1.08
HDAC4-216ENST00000544989 RAB24Q969Q5 203 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms