RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 TAS2R45P59539 299 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 RANP62826 216 aaKnown RBP8.09□□□□□ -1.11
YBX3-216ENST00000544622 SERF2P84101 59 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 ACOT6Q3I5F7 207 aaPredicted RBP8.09□□□□□ -1.11
YBX3-216ENST00000544622 KHDC3LQ587J8 217 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 FAM122CQ6P4D5 195 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 TMEM263Q8WUH6 116 aaKnown RBP8.09□□□□□ -1.11
YBX3-216ENST00000544622 C16orf74Q96GX8 76 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 FAM210BQ96KR6 192 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 VGLL1Q99990 258 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 ZNF492Q9P255 531 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 BIRC6Q9NR09 4857 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 DNAH6Q9C0G6 4158 aa8.09□□□□□ -1.11
YBX3-216ENST00000544622 TRBV7-9A0A0J9YWB2 115 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 RBAKDNA6NC62 111 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 SLC25A5P05141 298 aaKnown RBP8.08□□□□□ -1.12
YBX3-216ENST00000544622 STAG3L2P0CL84 134 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 STAG3L3P0CL85 134 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 RAB2AP61019 212 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 UBE2L3P68036 154 aaKnown RBP8.08□□□□□ -1.12
YBX3-216ENST00000544622 PQLC2Q6ZP29 291 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 ZFAND2AQ8N6M9 145 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 HSD17B11Q8NBQ5 300 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 OR10G4Q8NGN3 311 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 OR10G9Q8NGN4 311 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 OR10G7Q8NGN6 311 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 SUN5Q8TC36 379 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 LINC00467Q9BRT7 94 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 Q9H3A6 140 aa8.08□□□□□ -1.12
YBX3-216ENST00000544622 FAT2Q9NYQ8 4349 aa8.07□□□□□ -1.12
YBX3-216ENST00000544622 IGKV2-40A0A087WW87 121 aaPredicted RBP8.07□□□□□ -1.12
YBX3-216ENST00000544622 TRAV12-3A0A0B4J271 114 aa8.07□□□□□ -1.12
YBX3-216ENST00000544622 A0A1W2PPV4 95 aa8.07□□□□□ -1.12
YBX3-216ENST00000544622 IGKV2D-40P01614 121 aaPredicted RBP8.07□□□□□ -1.12
YBX3-216ENST00000544622 HTN1P15515 57 aa8.07□□□□□ -1.12
YBX3-216ENST00000544622 CD300CQ08708 224 aa8.07□□□□□ -1.12
YBX3-216ENST00000544622 RPL7L1Q6DKI1 246 aaKnown RBP8.07□□□□□ -1.12
YBX3-216ENST00000544622 ARL6IP6Q8N6S5 226 aa8.07□□□□□ -1.12
YBX3-216ENST00000544622 INO80EQ8NBZ0 244 aaPredicted RBP8.07□□□□□ -1.12
YBX3-216ENST00000544622 PYGO2Q9BRQ0 406 aa8.07□□□□□ -1.12
YBX3-216ENST00000544622 TIMM8BQ9Y5J9 83 aaPredicted RBP8.07□□□□□ -1.12
YBX3-216ENST00000544622 FXYD6-FXYD2A0A087WZ82 144 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 C7orf71A4D174 169 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 DIRC3C9JPN6 131 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 J3KRW8 73 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 MBP02144 154 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 DAD1P61803 113 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 TMEM78Q5T7P6 136 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 PRR9Q5T870 116 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 RXFP4Q8TDU9 374 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 RAB24Q969Q5 203 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 NDUFAF3Q9BU61 184 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 SH3BGRL3Q9H299 93 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 OTORQ9NRC9 128 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 CYTL1Q9NRR1 136 aa8.06□□□□□ -1.12
YBX3-216ENST00000544622 CBY3A6NI87 242 aa8.05□□□□□ -1.12
YBX3-216ENST00000544622 CDC34P49427 236 aaPredicted RBP8.05□□□□□ -1.12
YBX3-216ENST00000544622 ZNF138P52744 262 aa8.05□□□□□ -1.12
YBX3-216ENST00000544622 BTN1A1Q13410 526 aa8.05□□□□□ -1.12
YBX3-216ENST00000544622 ANXA2RQ3ZCQ2 193 aa8.05□□□□□ -1.12
YBX3-216ENST00000544622 Q6ZQT7 251 aa8.05□□□□□ -1.12
YBX3-216ENST00000544622 C11orf72Q8NBR9 251 aa8.05□□□□□ -1.12
YBX3-216ENST00000544622 TMED6Q8WW62 240 aa8.05□□□□□ -1.12
YBX3-216ENST00000544622 GNPNAT1Q96EK6 184 aaPredicted RBP8.05□□□□□ -1.12
YBX3-216ENST00000544622 DNAH17Q9UFH2 4485 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 PGPA6NDG6 321 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 TAAR5O14804 337 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
YBX3-216ENST00000544622 GPX1P07203 203 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 ARL14EPLP0DKL9 152 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 DEFB130BP0DP73 79 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 DEFB130AP0DP74 79 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 CSN1S1P47710 185 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 DAZ2Q13117 558 aaKnown RBP8.04□□□□□ -1.12
YBX3-216ENST00000544622 SSX7Q7RTT5 188 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 CCDC28AQ8IWP9 274 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 OR11H4Q8NGC9 324 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 Q8TAT8 98 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 NOP10Q9NPE3 64 aaKnown RBP8.04□□□□□ -1.12
YBX3-216ENST00000544622 LENEPQ9Y5L5 61 aa8.04□□□□□ -1.12
YBX3-216ENST00000544622 ARPC5O15511 151 aa8.03□□□□□ -1.12
YBX3-216ENST00000544622 RNASE4P34096 147 aaKnown RBP8.03□□□□□ -1.12
YBX3-216ENST00000544622 ZNF726P1Q15940 193 aa8.03□□□□□ -1.12
YBX3-216ENST00000544622 TMEM88Q6PEY1 159 aa8.03□□□□□ -1.12
YBX3-216ENST00000544622 BORCS7-ASMTA0A0B4J1R7 106 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 HMSDA8MTL9 139 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 SMLR1H3BR10 107 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 ATP5G1P05496 136 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 P0DMU3 169 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 FAM231AP0DMU4 169 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 FAM231CP0DMU5 169 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 GCHFRP30047 84 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 ATP5G3P48201 142 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 ZNF345Q14585 488 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 FAM74A1Q5RGS3 127 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 IBA57Q5T440 356 aaKnown RBP8.02□□□□□ -1.13
YBX3-216ENST00000544622 Q6AWC8 147 aa8.02□□□□□ -1.13
YBX3-216ENST00000544622 EIF4E3Q8N5X7 224 aaKnown RBP8.02□□□□□ -1.13
YBX3-216ENST00000544622 POM121L12Q8N7R1 296 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 235.8 ms