RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 NAA20P61599 178 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 ITGB3BPQ13352 177 aaPredicted RBP0.47□□□□□ -2.33
YBX3-214ENST00000544501 KISS1Q15726 138 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 GUK1Q16774 197 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 AADACL3Q5VUY0 350 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.47□□□□□ -2.33
YBX3-214ENST00000544501 AAED1Q7RTV5 226 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 ZNF550Q7Z398 422 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 DEFB125Q8N687 156 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 SIGLECL1Q8N7X8 197 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 C12orf29Q8N999 325 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 GPR32P1Q8NGA4 272 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 DEFB104AQ8WTQ1 72 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 CNBD2Q96M20 576 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 MRPS26Q9BYN8 205 aaKnown RBP0.47□□□□□ -2.33
YBX3-214ENST00000544501 YIPF3Q9GZM5 350 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 CISHQ9NSE2 258 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 USE1Q9NZ43 259 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 MED12LQ86YW9 2145 aa0.47□□□□□ -2.33
YBX3-214ENST00000544501 DOCK11Q5JSL3 2073 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 TRBV20OR9-2A0A075B6H5 130 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 IGKV1D-42A0A075B6H8 117 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 IRGMA1A4Y4 181 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 B4DSR2 109 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 KCNK1O00180 336 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 SLC16A4O15374 487 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 TGOLN2O43493 480 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 KLF7O75840 302 aaPredicted RBP0.46□□□□□ -2.34
YBX3-214ENST00000544501 LYPLA2O95372 231 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 UQCRHP07919 91 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 MT1HL1P0DM35 61 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 CRYGAP11844 174 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 SPI1P17947 270 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 FKBP2P26885 142 aaKnown RBP0.46□□□□□ -2.34
YBX3-214ENST00000544501 MARCKSL1P49006 195 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 DEFA3P59666 94 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 RPL18Q07020 188 aaKnown RBP0.46□□□□□ -2.34
YBX3-214ENST00000544501 ZNF345Q14585 488 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 SPCS2Q15005 226 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 CDK10Q15131 360 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 KCNJ8Q15842 424 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 GLT8D1Q68CQ7 371 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 CD200R1LQ6Q8B3 271 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 ZNF439Q8NDP4 499 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 WFDC9Q8NEX5 89 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 MCFD2Q8NI22 146 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 SERPINI1Q99574 410 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 BPESC1Q9GZL8 116 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 WDR61Q9GZS3 305 aaKnown RBP0.46□□□□□ -2.34
YBX3-214ENST00000544501 TP73-AS1Q9UF72 201 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 GUCA1BQ9UMX6 200 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 BAIAP2Q9UQB8 552 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 LSM5Q9Y4Y9 91 aaKnown RBP0.46□□□□□ -2.34
YBX3-214ENST00000544501 SNURFQ9Y675 71 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 KIAA1549Q9HCM3 1950 aa0.46□□□□□ -2.34
YBX3-214ENST00000544501 ANKRD36A6QL64 1941 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 TRAV1-1A0A0B4J248 108 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 PQLC2LA1A4F0 135 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 FUOMA2VDF0 154 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 FABP5P3A8MUU1 101 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 GEMIN2O14893 280 aaKnown RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 CRYZL1O95825 349 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 IFNA14P01570 189 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 SMR3BP02814 79 aaPredicted RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 SHBGP04278 402 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 PRM2P04554 102 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 RPS17P08708 135 aaKnown RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 RNASE3P12724 160 aaKnown RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 HIST1H2BOP23527 126 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 HIST1H2BBP33778 126 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 ZNF80P51504 273 aaPredicted RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 EFNA4P52798 201 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 HIST1H2BDP58876 126 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 SPCS3P61009 180 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 HIST1H2BCP62807 126 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 HBA1P69905 142 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 IFITM2Q01629 132 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 HIST2H2BEQ16778 126 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 KHDC3LQ587J8 217 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 IBA57Q5T440 356 aaKnown RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 SYPL2Q5VXT5 272 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 SFXN4Q6P4A7 337 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 LCN15Q6UWW0 184 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 Q6ZS49 121 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 IQCF2Q8IXL9 164 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 LINC00471Q8N535 108 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 ANKRD29Q8N6D5 301 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 ZNF565Q8N9K5 539 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 CCL4L1Q8NHW4 92 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 PATE1Q8WXA2 126 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 C11orf40Q8WZ69 217 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 PSMF1Q92530 271 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 HIST1H2BHQ93079 126 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 TMEM106AQ96A25 262 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 PTH2Q96A98 100 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 IMP4Q96G21 291 aaKnown RBP0.45□□□□□ -2.34
YBX3-214ENST00000544501 PPP1R2P1Q96PQ5 205 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 HIST1H2BNQ99877 126 aa0.45□□□□□ -2.34
YBX3-214ENST00000544501 HIST1H2BMQ99879 126 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms