RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CD5LO43866 347 aa10.4□□□□□ -0.75
HCFC2-202ENST00000544223 GDF5OSQ5U4N7 250 aa10.4□□□□□ -0.75
HCFC2-202ENST00000544223 RNF24Q9Y225 148 aa10.4□□□□□ -0.75
HCFC2-202ENST00000544223 C2CD3Q4AC94 2353 aa10.4□□□□□ -0.75
HCFC2-202ENST00000544223 C19orf71A6NCJ1 209 aa10.39□□□□□ -0.75
HCFC2-202ENST00000544223 F2Z2F3 143 aa10.39□□□□□ -0.75
HCFC2-202ENST00000544223 SLURP1P55000 103 aa10.39□□□□□ -0.75
HCFC2-202ENST00000544223 DAZAP1Q96EP5 407 aaKnown RBP10.39□□□□□ -0.75
HCFC2-202ENST00000544223 HAX1O00165 279 aa10.39□□□□□ -0.75
HCFC2-202ENST00000544223 OR2D3Q8NGH3 330 aa10.39□□□□□ -0.75
HCFC2-202ENST00000544223 BTF3L4Q96K17 158 aa10.39□□□□□ -0.75
HCFC2-202ENST00000544223 TCEAL7Q9BRU2 100 aa10.39□□□□□ -0.75
HCFC2-202ENST00000544223 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
HCFC2-202ENST00000544223 TYMSP04818 313 aa10.38□□□□□ -0.75
HCFC2-202ENST00000544223 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
HCFC2-202ENST00000544223 DAZ1Q9NQZ3 744 aaKnown RBP10.38□□□□□ -0.75
HCFC2-202ENST00000544223 ATRQ13535 2644 aa10.38□□□□□ -0.75
HCFC2-202ENST00000544223 IGHV7-4-1A0A0J9YVY3 117 aa10.38□□□□□ -0.75
HCFC2-202ENST00000544223 XKRY2A2RUG3 117 aa10.38□□□□□ -0.75
HCFC2-202ENST00000544223 K7EQM0 130 aa10.38□□□□□ -0.75
HCFC2-202ENST00000544223 PRR25Q96S07 402 aa10.38□□□□□ -0.75
HCFC2-202ENST00000544223 UBE2CO00762 179 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 NUPR1O60356 82 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 LY6G6DO95868 133 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 HOXD3P31249 432 aaPredicted RBP10.37□□□□□ -0.75
HCFC2-202ENST00000544223 FAM231DQ6ZW35 169 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 GRAMD2BQ96HH9 432 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 AGPAT4-IT1Q9H0P7 198 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 TMEM213A2RRL7 107 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 KIR3DS1Q14943 382 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 WIPF2Q8TF74 440 aaPredicted RBP10.37□□□□□ -0.75
HCFC2-202ENST00000544223 C12orf57Q99622 126 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 NAT8BQ9UHF3 227 aa10.37□□□□□ -0.75
HCFC2-202ENST00000544223 A0A087X0K7 114 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 BRI3O95415 125 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 SLAQ13239 276 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 C1orf194Q5T5A4 169 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 TMEM256Q8N2U0 113 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 TSKUQ8WUA8 353 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 F8P00451 2351 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 SH2D1AO60880 128 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 S100A12P80511 92 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 FOXE3Q13461 319 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 FAM106AQ4KMX7 169 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 TMEM136Q6ZRR5 245 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 ZNF738Q8NE65 137 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 SMPXQ9UHP9 88 aa10.36□□□□□ -0.75
HCFC2-202ENST00000544223 CD33P20138 364 aa10.35□□□□□ -0.75
HCFC2-202ENST00000544223 FAM209BQ5JX69 171 aa10.35□□□□□ -0.75
HCFC2-202ENST00000544223 OR11H1Q8NG94 326 aa10.35□□□□□ -0.75
HCFC2-202ENST00000544223 IZUMO1RA6ND01 250 aa10.35□□□□□ -0.75
HCFC2-202ENST00000544223 SPRY2O43597 315 aa10.35□□□□□ -0.75
HCFC2-202ENST00000544223 S100A9P06702 114 aaKnown RBP10.35□□□□□ -0.75
HCFC2-202ENST00000544223 LGALS1P09382 135 aaKnown RBP10.35□□□□□ -0.75
HCFC2-202ENST00000544223 FOXA3P55318 350 aaPredicted RBP10.35□□□□□ -0.75
HCFC2-202ENST00000544223 ZFP30Q9Y2G7 519 aa10.35□□□□□ -0.75
HCFC2-202ENST00000544223 BAHCC1Q9P281 2608 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 FABP4P15090 132 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 HOXA5P20719 270 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 PRR9Q5T870 116 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 ELANEP08246 267 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 ZNF575Q86XF7 245 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 Q8N2B8 174 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 KLHL30-AS1Q8NEE0 82 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 NRN1Q9NPD7 142 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 ZNF580Q9UK33 172 aa10.34□□□□□ -0.75
HCFC2-202ENST00000544223 INAFM1C9JVW0 142 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 SOCS3O14543 225 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 IGKV3-20P01619 116 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 ARMS2P0C7Q2 107 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 CT45A10P0DMU9 189 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 CD28P10747 220 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 MEOX2P50222 304 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 CDPF1Q6NVV7 123 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 ADAMTSL5Q6ZMM2 481 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 HIST3H2BBQ8N257 126 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 MYOZ3Q8TDC0 251 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 UBE2E2Q96LR5 201 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 ATP6V0BQ99437 205 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 SLC50A1Q9BRV3 221 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 ZNF492Q9P255 531 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 C11orf21Q9P2W6 132 aa10.33□□□□□ -0.76
HCFC2-202ENST00000544223 ZNF253O75346 499 aa10.32□□□□□ -0.76
HCFC2-202ENST00000544223 ZNF688P0C7X2 276 aa10.32□□□□□ -0.76
HCFC2-202ENST00000544223 CLEC5AQ9NY25 188 aa10.32□□□□□ -0.76
HCFC2-202ENST00000544223 TP53TG3Q9ULZ0 132 aa10.32□□□□□ -0.76
HCFC2-202ENST00000544223 A8MWL6 223 aa10.32□□□□□ -0.76
HCFC2-202ENST00000544223 NPIPB6E9PJ23 425 aa10.32□□□□□ -0.76
HCFC2-202ENST00000544223 ORM1P02763 201 aa10.32□□□□□ -0.76
HCFC2-202ENST00000544223 HIST1H1AQ02539 215 aaPredicted RBP10.32□□□□□ -0.76
HCFC2-202ENST00000544223 S100A7P31151 101 aa10.31□□□□□ -0.76
HCFC2-202ENST00000544223 CDX1P47902 265 aaPredicted RBP10.31□□□□□ -0.76
HCFC2-202ENST00000544223 IQCJQ1A5X6 159 aa10.31□□□□□ -0.76
HCFC2-202ENST00000544223 FAM162BQ5T6X4 162 aa10.31□□□□□ -0.76
HCFC2-202ENST00000544223 OR10D4PQ8NGN7 298 aa10.31□□□□□ -0.76
HCFC2-202ENST00000544223 SMIM12Q96EX1 92 aa10.31□□□□□ -0.76
HCFC2-202ENST00000544223 MS4A6AQ9H2W1 248 aa10.31□□□□□ -0.76
HCFC2-202ENST00000544223 A0A1W2PS18 150 aa10.31□□□□□ -0.76
HCFC2-202ENST00000544223 DLX4Q92988 240 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms