RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 AMTNQ6UX39 209 aa8.93□□□□□ -0.98
DDX55-210ENST00000543016 LYPD6BQ8NI32 183 aa8.93□□□□□ -0.98
DDX55-210ENST00000543016 YTHDF2Q9Y5A9 579 aaKnown RBP8.93□□□□□ -0.98
DDX55-210ENST00000543016 AGRNO00468 2067 aa8.93□□□□□ -0.98
DDX55-210ENST00000543016 PAGE4O60829 102 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 IGKV3-20P01619 116 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 TCRAP04437 139 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 CDKN1BP46527 198 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 ZNF138P52744 262 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 UBE2G2P60604 165 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 CST9LP1Q5W188 147 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 CCDC28AQ8IWP9 274 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 CYB561D1Q8N8Q1 229 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 RNF183Q96D59 192 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 RCHY1Q96PM5 261 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 ATG101Q9BSB4 218 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 AGPAT4-IT1Q9H0P7 198 aa8.92□□□□□ -0.98
DDX55-210ENST00000543016 SPRY2O43597 315 aa8.91□□□□□ -0.98
DDX55-210ENST00000543016 GIG44P09565 113 aaPredicted RBP8.91□□□□□ -0.98
DDX55-210ENST00000543016 ZNF705DP0CH99 300 aaPredicted RBP8.91□□□□□ -0.98
DDX55-210ENST00000543016 ZNF705BP0CI00 300 aaPredicted RBP8.91□□□□□ -0.98
DDX55-210ENST00000543016 GOLT1AQ6ZVE7 132 aa8.91□□□□□ -0.98
DDX55-210ENST00000543016 IGF2BP2-AS1Q96M15 143 aa8.91□□□□□ -0.98
DDX55-210ENST00000543016 C20orf144Q9BQM9 153 aa8.91□□□□□ -0.98
DDX55-210ENST00000543016 ZNF492Q9P255 531 aa8.91□□□□□ -0.98
DDX55-210ENST00000543016 GNG13Q9P2W3 67 aa8.91□□□□□ -0.98
DDX55-210ENST00000543016 IGKV2-40A0A087WW87 121 aaPredicted RBP8.9□□□□□ -0.98
DDX55-210ENST00000543016 A0A1B0GV50 99 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 C11orf94C9JXX5 98 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 NDUFS6O75380 124 aaKnown RBP8.9□□□□□ -0.98
DDX55-210ENST00000543016 INSP01308 110 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 IGKV2D-40P01614 121 aaPredicted RBP8.9□□□□□ -0.98
DDX55-210ENST00000543016 S100A9P06702 114 aaKnown RBP8.9□□□□□ -0.98
DDX55-210ENST00000543016 CT45A10P0DMU9 189 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 CRISP2P16562 243 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 CCL20P78556 96 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 ZNF767PQ75MW2 155 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 TMEM75Q8N9X5 138 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 CSNK1G2-AS1Q8NCQ2 148 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 FAM19A4Q96LR4 140 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 ASCL2Q99929 193 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 VGLL1Q99990 258 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 SLC35B3Q9H1N7 401 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 XCL2Q9UBD3 114 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 GOLT1BQ9Y3E0 138 aa8.9□□□□□ -0.98
DDX55-210ENST00000543016 PEX7O00628 323 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 PDE6DO43924 150 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 BCL2P10415 239 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 RAB14P61106 215 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 ERCC8Q13216 396 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 SPINK13Q1W4C9 94 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 DEFB135Q30KP9 77 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 SAPCD1Q5SSQ6 148 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 TMEM256Q8N2U0 113 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 OVOL2Q9BRP0 275 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 NDFIP1Q9BT67 221 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 VAX2Q9UIW0 290 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 RPH3ALQ9UNE2 315 aa8.89□□□□□ -0.99
DDX55-210ENST00000543016 TRBV6-1A0A0K0K1D8 114 aa8.88□□□□□ -0.99
DDX55-210ENST00000543016 SMIM9A6NGZ8 99 aa8.88□□□□□ -0.99
DDX55-210ENST00000543016 KLLNB2CW77 178 aa8.88□□□□□ -0.99
DDX55-210ENST00000543016 GNG5P63218 68 aa8.88□□□□□ -0.99
DDX55-210ENST00000543016 MEF2BQ02080 365 aaPredicted RBP8.88□□□□□ -0.99
DDX55-210ENST00000543016 FMC1Q96HJ9 113 aa8.88□□□□□ -0.99
DDX55-210ENST00000543016 NEU1Q99519 415 aa8.88□□□□□ -0.99
DDX55-210ENST00000543016 KLF12Q9Y4X4 402 aa8.88□□□□□ -0.99
DDX55-210ENST00000543016 M0R2Z0 102 aa8.87□□□□□ -0.99
DDX55-210ENST00000543016 CRXO43186 299 aaPredicted RBP8.87□□□□□ -0.99
DDX55-210ENST00000543016 GPX1P07203 203 aa8.87□□□□□ -0.99
DDX55-210ENST00000543016 ATP5G3P48201 142 aa8.87□□□□□ -0.99
DDX55-210ENST00000543016 FLI1Q01543 452 aaPredicted RBP8.87□□□□□ -0.99
DDX55-210ENST00000543016 LCE2AQ5TA79 106 aaPredicted RBP8.87□□□□□ -0.99
DDX55-210ENST00000543016 ZNF705AQ6ZN79 300 aaPredicted RBP8.87□□□□□ -0.99
DDX55-210ENST00000543016 C11orf52Q96A22 123 aa8.87□□□□□ -0.99
DDX55-210ENST00000543016 RARRES2Q99969 163 aa8.87□□□□□ -0.99
DDX55-210ENST00000543016 PSG8Q9UQ74 426 aa8.87□□□□□ -0.99
DDX55-210ENST00000543016 ZFP30Q9Y2G7 519 aa8.87□□□□□ -0.99
DDX55-210ENST00000543016 LOC102723971A0A1B0GUV8 181 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 RBFOX3A6NFN3 312 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 H7BYZ3 331 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 IGLV2-11P01706 119 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 MIFP14174 115 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 AKR1C3P42330 323 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 FXYD7P58549 80 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 UBE2G1P62253 170 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 TMEM183BQ1AE95 376 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 ZFAND2AQ8N6M9 145 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 OR11H2Q8NH07 326 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 NIPSNAP3BQ9BS92 247 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 TMEM208Q9BTX3 173 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 TREM1Q9NP99 234 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 U3KQK5 164 aa8.86□□□□□ -0.99
DDX55-210ENST00000543016 C7orf71A4D174 169 aa8.85□□□□□ -0.99
DDX55-210ENST00000543016 TAS2R60P59551 318 aa8.85□□□□□ -0.99
DDX55-210ENST00000543016 ZNF506Q5JVG8 444 aa8.85□□□□□ -0.99
DDX55-210ENST00000543016 GFI1BQ5VTD9 330 aa8.85□□□□□ -0.99
DDX55-210ENST00000543016 C2CD4CQ8TF44 421 aa8.85□□□□□ -0.99
DDX55-210ENST00000543016 FAM210AQ96ND0 272 aa8.85□□□□□ -0.99
DDX55-210ENST00000543016 SMDT1Q9H4I9 107 aa8.85□□□□□ -0.99
DDX55-210ENST00000543016 TRAV12-2A0A075B6T6 113 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms