RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CDPF1Q6NVV7 123 aa13.13□□□□□ -0.31
TMEM50B-210ENST00000542230 S100A7P31151 101 aa13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 RPL11P62913 178 aaKnown RBP13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 RHPN1-AS1Q9BWJ2 59 aa13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 A8MWL6 223 aa13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 LINC00310P59036 64 aa13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 SSTP61278 116 aa13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 COA6Q5JTJ3 125 aaKnown RBP13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 Q6ZQT7 251 aa13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 SMR3AQ99954 134 aa13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 ESM1Q9NQ30 184 aa13.12□□□□□ -0.31
TMEM50B-210ENST00000542230 SH2D1AO60880 128 aa13.11□□□□□ -0.31
TMEM50B-210ENST00000542230 C16orf92Q96LL3 132 aa13.11□□□□□ -0.31
TMEM50B-210ENST00000542230 AGPAT4-IT1Q9H0P7 198 aa13.11□□□□□ -0.31
TMEM50B-210ENST00000542230 WNK1Q9H4A3 2382 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 AMBPP02760 352 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 MUC21A0A0G2JKD1 596 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 IGHV7-4-1A0A0J9YVY3 117 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 MUC21A0A140T8X8 626 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 A0A1B0GXF2 115 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 DEFB136Q30KP8 78 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 CT83Q5H943 113 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 FAM209BQ5JX69 171 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 MUC21Q5SSG8 566 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 SLC50A1Q9BRV3 221 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 TPPP3Q9BW30 176 aa13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 DAZ1Q9NQZ3 744 aaKnown RBP13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 SETXQ7Z333 2677 aaKnown RBP13.1□□□□□ -0.31
TMEM50B-210ENST00000542230 HIVEP2P31629 2446 aa13.09□□□□□ -0.31
TMEM50B-210ENST00000542230 PCP4L1A6NKN8 68 aa13.09□□□□□ -0.31
TMEM50B-210ENST00000542230 S100A2P29034 98 aa13.09□□□□□ -0.31
TMEM50B-210ENST00000542230 PYY3Q5JQD4 70 aa13.09□□□□□ -0.31
TMEM50B-210ENST00000542230 FOXC2Q99958 501 aa13.09□□□□□ -0.31
TMEM50B-210ENST00000542230 YAE1D1Q9NRH1 226 aa13.09□□□□□ -0.31
TMEM50B-210ENST00000542230 S100A8P05109 93 aa13.09□□□□□ -0.31
TMEM50B-210ENST00000542230 IGHV4OR15-8A0A075B7B6 117 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 A0A087WW49 117 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 SERTM2A0A1B0GWG4 89 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 SOCS3O14543 225 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 CT45A10P0DMU9 189 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 CRISP2P16562 243 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 WDR73Q6P4I2 378 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 RBPMS2Q6ZRY4 209 aaKnown RBP13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 DNAJC9-AS1A6NH13 148 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 APCSP02743 223 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 FOXE3Q13461 319 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 TCTEX1D4Q5JR98 221 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 PACRGQ96M98 296 aaPredicted RBP13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 SMPXQ9UHP9 88 aa13.08□□□□□ -0.32
TMEM50B-210ENST00000542230 FLNBO75369 2602 aaKnown RBP13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 F6UB75 175 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 ARMS2P0C7Q2 107 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 SRIP30626 198 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 SYNJ2BPP57105 145 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 FAM162BQ5T6X4 162 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 MYOZ3Q8TDC0 251 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 WIPF2Q8TF74 440 aaPredicted RBP13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 DUX3Q96PT4 197 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 TMEM213A2RRL7 107 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 FAM106AQ4KMX7 169 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 SAPCD1Q5SSQ6 148 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 ARL6IP6Q8N6S5 226 aa13.07□□□□□ -0.32
TMEM50B-210ENST00000542230 SERF1AO75920 110 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 HLA-DQA1P01909 254 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 Q8N2B8 174 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 KLHDC1Q8N7A1 406 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 OR4B1Q8NGF8 309 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 RCHY1Q96PM5 261 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 MT-ND6P03923 174 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 ELANEP08246 267 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 IQCJQ1A5X6 159 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 WFDC3Q8IUB2 231 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 ZNF738Q8NE65 137 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 GFRA4Q9GZZ7 299 aa13.06□□□□□ -0.32
TMEM50B-210ENST00000542230 TMEM89A2RUT3 159 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 LGALS1P09382 135 aaKnown RBP13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 HBBP68871 147 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 Q6ZSV7 163 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 COX8CQ7Z4L0 72 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 NRN1Q9NPD7 142 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 J3KRW8 73 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 CD5LO43866 347 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 SMIM6P0DI80 62 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 CD33P20138 364 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 FOXA3P55318 350 aaPredicted RBP13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 NIT2Q9NQR4 276 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 C11orf21Q9P2W6 132 aa13.05□□□□□ -0.32
TMEM50B-210ENST00000542230 HIVEP1P15822 2718 aa13.04□□□□□ -0.32
TMEM50B-210ENST00000542230 A0A1W2PS18 150 aa13.04□□□□□ -0.32
TMEM50B-210ENST00000542230 TMEM189A5PLL7 270 aa13.04□□□□□ -0.32
TMEM50B-210ENST00000542230 HOXD3P31249 432 aaPredicted RBP13.04□□□□□ -0.32
TMEM50B-210ENST00000542230 PRR9Q5T870 116 aa13.04□□□□□ -0.32
TMEM50B-210ENST00000542230 C11orf44Q8N8P7 122 aa13.04□□□□□ -0.32
TMEM50B-210ENST00000542230 A8MWP6 167 aa13.03□□□□□ -0.32
TMEM50B-210ENST00000542230 TFPI2P48307 235 aa13.03□□□□□ -0.32
TMEM50B-210ENST00000542230 BAGE3Q86Y29 109 aa13.03□□□□□ -0.32
TMEM50B-210ENST00000542230 UBE2E2Q96LR5 201 aa13.03□□□□□ -0.32
TMEM50B-210ENST00000542230 RBAKDNA6NC62 111 aa13.03□□□□□ -0.32
TMEM50B-210ENST00000542230 SLURP1P55000 103 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms