RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 TUBA4BQ9H853 241 aa6.95□□□□□ -1.3
LDHA-220ENST00000542179 RPS10P5Q9NQ39 176 aa6.95□□□□□ -1.3
LDHA-220ENST00000542179 PPP1R14DQ9NXH3 145 aa6.95□□□□□ -1.3
LDHA-220ENST00000542179 RPH3ALQ9UNE2 315 aa6.95□□□□□ -1.3
LDHA-220ENST00000542179 PSG8Q9UQ74 426 aa6.95□□□□□ -1.3
LDHA-220ENST00000542179 ZFP30Q9Y2G7 519 aa6.95□□□□□ -1.3
LDHA-220ENST00000542179 TRAV25A0A0B4J276 109 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 CXorf65A6NEN9 183 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 PGPEP1LA6NFU8 196 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 ZNF705FA8MVS1 300 aaPredicted RBP6.94□□□□□ -1.3
LDHA-220ENST00000542179 K7EN84 100 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 K7EQG2 157 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 SCO1O75880 301 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 MT-ND4LP03901 98 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 PAFAH1B2P68402 229 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 DEFB114Q30KQ6 69 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 NSUN5P1Q3KNT7 163 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 C9orf47Q6ZRZ4 202 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 COX8CQ7Z4L0 72 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 Q86TA4 180 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 TMEM183AQ8IXX5 376 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 RNF182Q8N6D2 247 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 BIN3Q9NQY0 253 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
LDHA-220ENST00000542179 NOTCH1P46531 2555 aa6.94□□□□□ -1.3
LDHA-220ENST00000542179 JMJD1CQ15652 2540 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 TRAV8-1A0A0A6YYK1 113 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 PRAC2D3DTV9 90 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 DNASE2O00115 360 aaPredicted RBP6.93□□□□□ -1.3
LDHA-220ENST00000542179 PPP1R2P9O14990 202 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 KRTAP24-1Q3LI83 254 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 RNF212Q495C1 297 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 SAPCD1Q5SSQ6 148 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 RBPMS2Q6ZRY4 209 aaKnown RBP6.93□□□□□ -1.3
LDHA-220ENST00000542179 FAM231DQ6ZW35 169 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 PRNTQ86SH4 94 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 C20orf173Q96LM9 149 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 SGK494Q96LW2 274 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 OSTCQ9NRP0 149 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 SMCO4Q9NRQ5 59 aa6.93□□□□□ -1.3
LDHA-220ENST00000542179 IGKV3-7A0A075B6H7 116 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 IGKV2-40A0A087WW87 121 aaPredicted RBP6.92□□□□□ -1.3
LDHA-220ENST00000542179 IGKV2D-40P01614 121 aaPredicted RBP6.92□□□□□ -1.3
LDHA-220ENST00000542179 SNRPD3P62318 126 aaKnown RBP6.92□□□□□ -1.3
LDHA-220ENST00000542179 BTN1A1Q13410 526 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 PRIMA1Q86XR5 153 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 TMEM61Q8N0U2 210 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 GBGT1Q8N5D6 347 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 LINC00482Q8N8I6 264 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 ZNF738Q8NE65 137 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 OR2K2Q8NGT1 345 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 DYNLRB2Q8TF09 96 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 LINC00477Q96M19 166 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 PRR25Q96S07 402 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 SPAG8Q99932 426 aaPredicted RBP6.92□□□□□ -1.3
LDHA-220ENST00000542179 VGLL1Q99990 258 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 AGPAT4-IT1Q9H0P7 198 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 AURKAIP1Q9NWT8 199 aaPredicted RBP6.92□□□□□ -1.3
LDHA-220ENST00000542179 ZNF492Q9P255 531 aa6.92□□□□□ -1.3
LDHA-220ENST00000542179 TRBV7-9A0A0J9YWB2 115 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 NPIPB6E9PJ23 425 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 ZNF138P52744 262 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 ERVFC1-1P60608 527 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 OR5I1Q13606 314 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 CD300EQ496F6 205 aaPredicted RBP6.91□□□□□ -1.3
LDHA-220ENST00000542179 C15orf54Q8N8G6 183 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 OR8A1Q8NGG7 326 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 IMMP2LQ96T52 175 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 ZNF747Q9BV97 191 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 LENEPQ9Y5L5 61 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 SELENOKQ9Y6D0 94 aa6.91□□□□□ -1.3
LDHA-220ENST00000542179 C19orf71A6NCJ1 209 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 OR4C46A6NHA9 309 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 H7BYZ3 331 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 IGLV1-51P01701 117 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 PF4P02776 101 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 MGST1P10620 155 aaKnown RBP6.9□□□□□ -1.3
LDHA-220ENST00000542179 IBA57Q5T440 356 aaKnown RBP6.9□□□□□ -1.3
LDHA-220ENST00000542179 TMEM78Q5T7P6 136 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 TMEM88Q6PEY1 159 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 CBLN2Q8IUK8 224 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 FAM24BQ8N5W8 94 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 NHLRC2Q8NBF2 726 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 OR10J6PQ8NGY7 276 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 FAM19A4Q96LR4 140 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 YPEL4Q96NS1 127 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 NDFIP1Q9BT67 221 aa6.9□□□□□ -1.3
LDHA-220ENST00000542179 SAP30O75446 220 aa6.89□□□□□ -1.31
LDHA-220ENST00000542179 TFPI2P48307 235 aa6.89□□□□□ -1.31
LDHA-220ENST00000542179 CMC4P56277 68 aaPredicted RBP6.89□□□□□ -1.31
LDHA-220ENST00000542179 ERCC8Q13216 396 aa6.89□□□□□ -1.31
LDHA-220ENST00000542179 PSMG4Q5JS54 123 aa6.89□□□□□ -1.31
LDHA-220ENST00000542179 NUDT10Q8NFP7 164 aa6.89□□□□□ -1.31
LDHA-220ENST00000542179 TMEM158Q8WZ71 300 aa6.89□□□□□ -1.31
LDHA-220ENST00000542179 NUDT11Q96G61 164 aa6.89□□□□□ -1.31
LDHA-220ENST00000542179 ZC2HC1AQ96GY0 325 aa6.89□□□□□ -1.31
LDHA-220ENST00000542179 RNASE7Q9H1E1 156 aaKnown RBP6.89□□□□□ -1.31
LDHA-220ENST00000542179 ZNF256Q9Y2P7 627 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms