RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SETD2Q9BYW2 2564 aaPredicted RBP6.72□□□□□ -1.33
THBS3-210ENST00000541576 IGHG4P01861 327 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 RAB9AP51151 201 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 TMEM167BQ9NRX6 74 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 MRPL27Q9P0M9 148 aaKnown RBP6.72□□□□□ -1.33
THBS3-210ENST00000541576 A0A0G2JLM5 398 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 WI2-2373I1.2A0A1W2PRP0 233 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 FAM181BA6NEQ2 426 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 CD99P14209 185 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 LCNL1Q6ZST4 164 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 SMIM15Q7Z3B0 74 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 Q8N2B8 174 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 KLHDC1Q8N7A1 406 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 ZNF414Q96IQ9 312 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 ESM1Q9NQ30 184 aa6.72□□□□□ -1.33
THBS3-210ENST00000541576 IGHV3-35A0A0C4DH35 117 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 MUC21A0A0G2JKD1 596 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 MUC21A0A140T8X8 626 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 PDE6DO43924 150 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 CSN3P07498 182 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 IGLL1P15814 213 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 PSMB8P28062 276 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 CDKN1BP46527 198 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 CENPWQ5EE01 88 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 MUC21Q5SSG8 566 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 STXBP6Q8NFX7 210 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 LINC00479Q96M42 142 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 SLC25A39Q9BZJ4 359 aaPredicted RBP6.71□□□□□ -1.33
THBS3-210ENST00000541576 CST9LQ9H4G1 147 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 IL36BQ9NZH7 164 aa6.71□□□□□ -1.33
THBS3-210ENST00000541576 TMEM89A2RUT3 159 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 ZNF324O75467 553 aaPredicted RBP6.71□□□□□ -1.34
THBS3-210ENST00000541576 IGHV3-11P01762 117 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 PYYP10082 97 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 GNG4P50150 75 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 UBE2L3P68036 154 aaKnown RBP6.71□□□□□ -1.34
THBS3-210ENST00000541576 FOXL1Q12952 345 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 ZNF418Q8TF45 676 aaPredicted RBP6.71□□□□□ -1.34
THBS3-210ENST00000541576 PAXXQ9BUH6 204 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 OCIAD2Q56VL3 154 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 C10orf99Q6UWK7 81 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 ORAOV1Q8WV07 137 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 NUDT11Q96G61 164 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 KCNS1Q96KK3 526 aa6.71□□□□□ -1.34
THBS3-210ENST00000541576 A0A087X0K7 114 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 ARL3P36405 182 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 Q71RC1 249 aaPredicted RBP6.7□□□□□ -1.34
THBS3-210ENST00000541576 NUDT10Q8NFP7 164 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 OR2D3Q8NGH3 330 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 TSKUQ8WUA8 353 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 RAB37Q96AX2 223 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 SHANK2-AS3Q9BTD1 123 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 ZNF331Q9NQX6 463 aaPredicted RBP6.7□□□□□ -1.34
THBS3-210ENST00000541576 F8P00451 2351 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 CUBNO60494 3623 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.7□□□□□ -1.34
THBS3-210ENST00000541576 H3BRN7 92 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 BMPR1BO00238 502 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 ZNF138P52744 262 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 Q8N976 141 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 OR4X2Q8NGF9 303 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 TXNDC17Q9BRA2 123 aa6.7□□□□□ -1.34
THBS3-210ENST00000541576 HELTA6NFD8 242 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 APCSP02743 223 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 ELANEP08246 267 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 SLAQ13239 276 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 FOXE3Q13461 319 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 Q6ZSV7 163 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 LINC00173Q6ZV60 143 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 FXYD5Q96DB9 178 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 RABAC1Q9UI14 185 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 IGHV3OR16-8A0A075B7F1 116 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 TRBV12-3P01733 135 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 RNASE1P07998 156 aaKnown RBP6.69□□□□□ -1.34
THBS3-210ENST00000541576 HILS1P60008 231 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 MRPL52Q86TS9 123 aaKnown RBP6.69□□□□□ -1.34
THBS3-210ENST00000541576 NIT1Q86X76 327 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 ZFAND3Q9H8U3 227 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 FN1P02751 2386 aaKnown RBP6.69□□□□□ -1.34
THBS3-210ENST00000541576 GP9P14770 177 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 CTRLP40313 264 aa6.69□□□□□ -1.34
THBS3-210ENST00000541576 A0A1W2PRE2 83 aa6.68□□□□□ -1.34
THBS3-210ENST00000541576 INAFM1C9JVW0 142 aa6.68□□□□□ -1.34
THBS3-210ENST00000541576 ZNF207O43670 478 aaKnown RBP6.68□□□□□ -1.34
THBS3-210ENST00000541576 TM4SF20Q53R12 229 aa6.68□□□□□ -1.34
THBS3-210ENST00000541576 EBLN2Q6P2I7 272 aa6.68□□□□□ -1.34
THBS3-210ENST00000541576 BPIFA4PQ86YQ2 179 aa6.68□□□□□ -1.34
THBS3-210ENST00000541576 TMEM14CQ9P0S9 112 aa6.68□□□□□ -1.34
THBS3-210ENST00000541576 GGTLC3B5MD39 225 aa6.68□□□□□ -1.34
THBS3-210ENST00000541576 H3BTX0 84 aa6.68□□□□□ -1.34
THBS3-210ENST00000541576 GAGE12BA1L429 117 aa6.67□□□□□ -1.34
THBS3-210ENST00000541576 OR4C46A6NHA9 309 aa6.67□□□□□ -1.34
THBS3-210ENST00000541576 TMEM238C9JI98 176 aa6.67□□□□□ -1.34
THBS3-210ENST00000541576 NBEAP1P0C6P0 100 aa6.67□□□□□ -1.34
THBS3-210ENST00000541576 IBA57Q5T440 356 aaKnown RBP6.67□□□□□ -1.34
THBS3-210ENST00000541576 SPATA12Q7Z6I5 190 aa6.67□□□□□ -1.34
THBS3-210ENST00000541576 RNF152Q8N8N0 203 aa6.67□□□□□ -1.34
THBS3-210ENST00000541576 BLNKQ8WV28 456 aa6.67□□□□□ -1.34
THBS3-210ENST00000541576 AP1S3Q96PC3 154 aa6.67□□□□□ -1.34
THBS3-210ENST00000541576 JMJD8Q96S16 334 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms