RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 H3BRN7 92 aa11.71□□□□□ -0.54
VARS2-211ENST00000541562 F6UB75 175 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 LY6LH3BQJ8 138 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 CACNG7P62955 275 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 DNLZQ5SXM8 178 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 MAP1LC3CQ9BXW4 147 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 PRRC2AP48634 2157 aaKnown RBP11.7□□□□□ -0.54
VARS2-211ENST00000541562 ESDP10768 282 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 TMEM95Q3KNT9 176 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 PRSS22Q9GZN4 317 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 KLF12Q9Y4X4 402 aa11.7□□□□□ -0.54
VARS2-211ENST00000541562 TRAV40A0A0B4J280 105 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 F8W735 103 aaPredicted RBP11.69□□□□□ -0.54
VARS2-211ENST00000541562 HOXB4P17483 251 aaPredicted RBP11.69□□□□□ -0.54
VARS2-211ENST00000541562 KLRB1Q12918 225 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 KIR3DS1Q14943 382 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 PRELID3AQ96N28 172 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 PRTN3P24158 256 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 TNFRSF14Q92956 283 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 DUX5Q96PT3 197 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 RABAC1Q9UI14 185 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 EDN2P20800 178 aa11.69□□□□□ -0.54
VARS2-211ENST00000541562 NPYP01303 97 aa11.68□□□□□ -0.54
VARS2-211ENST00000541562 RIGQ13278 110 aa11.68□□□□□ -0.54
VARS2-211ENST00000541562 Q6ZS46 218 aa11.68□□□□□ -0.54
VARS2-211ENST00000541562 MSRB2Q9Y3D2 182 aa11.68□□□□□ -0.54
VARS2-211ENST00000541562 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
VARS2-211ENST00000541562 CHD6Q8TD26 2715 aa11.67□□□□□ -0.54
VARS2-211ENST00000541562 K7EP13 123 aa11.67□□□□□ -0.54
VARS2-211ENST00000541562 CCL25O15444 150 aa11.67□□□□□ -0.54
VARS2-211ENST00000541562 CHODLQ9H9P2 273 aa11.67□□□□□ -0.54
VARS2-211ENST00000541562 IGLV11-55A0A075B6I3 123 aa11.67□□□□□ -0.54
VARS2-211ENST00000541562 C20orf202A1L168 122 aa11.67□□□□□ -0.54
VARS2-211ENST00000541562 S100A7P31151 101 aa11.67□□□□□ -0.54
VARS2-211ENST00000541562 SIGLEC8Q9NYZ4 499 aa11.67□□□□□ -0.54
VARS2-211ENST00000541562 DOPEY1Q5JWR5 2465 aa11.66□□□□□ -0.54
VARS2-211ENST00000541562 A1L4Q6 167 aa11.66□□□□□ -0.54
VARS2-211ENST00000541562 LBHQ53QV2 105 aaPredicted RBP11.66□□□□□ -0.54
VARS2-211ENST00000541562 Q8N9W7 124 aa11.66□□□□□ -0.54
VARS2-211ENST00000541562 NEU4Q8WWR8 484 aaPredicted RBP11.66□□□□□ -0.54
VARS2-211ENST00000541562 M0R381 172 aa11.66□□□□□ -0.54
VARS2-211ENST00000541562 TRGV3P03979 118 aa11.66□□□□□ -0.54
VARS2-211ENST00000541562 HTN1P15515 57 aa11.66□□□□□ -0.54
VARS2-211ENST00000541562 COX19Q49B96 90 aa11.66□□□□□ -0.54
VARS2-211ENST00000541562 MRPL51Q4U2R6 128 aaKnown RBP11.66□□□□□ -0.54
VARS2-211ENST00000541562 DKK2Q9UBU2 259 aa11.66□□□□□ -0.54
VARS2-211ENST00000541562 PRR25Q96S07 402 aa11.65□□□□□ -0.54
VARS2-211ENST00000541562 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.54
VARS2-211ENST00000541562 FER1L6-AS1Q8NA97 138 aa11.65□□□□□ -0.54
VARS2-211ENST00000541562 TMEM191AQ9H0A3 160 aa11.65□□□□□ -0.54
VARS2-211ENST00000541562 THYN1Q9P016 225 aa11.65□□□□□ -0.54
VARS2-211ENST00000541562 INS-IGF2F8WCM5 200 aa11.64□□□□□ -0.55
VARS2-211ENST00000541562 PRSS1P07477 247 aa11.64□□□□□ -0.55
VARS2-211ENST00000541562 BLCAPP62952 87 aa11.64□□□□□ -0.55
VARS2-211ENST00000541562 FAM162BQ5T6X4 162 aa11.64□□□□□ -0.55
VARS2-211ENST00000541562 C7orf71A4D174 169 aa11.64□□□□□ -0.55
VARS2-211ENST00000541562 PF4V1P10720 104 aa11.64□□□□□ -0.55
VARS2-211ENST00000541562 PVRIGQ6DKI7 326 aa11.64□□□□□ -0.55
VARS2-211ENST00000541562 NEGR1Q7Z3B1 354 aa11.64□□□□□ -0.55
VARS2-211ENST00000541562 OR10AG1Q8NH19 301 aa11.64□□□□□ -0.55
VARS2-211ENST00000541562 SLC25A34Q6PIV7 304 aa11.63□□□□□ -0.55
VARS2-211ENST00000541562 OR11H6Q8NGC7 330 aa11.63□□□□□ -0.55
VARS2-211ENST00000541562 FBLL1A6NHQ2 334 aaKnown RBP11.63□□□□□ -0.55
VARS2-211ENST00000541562 M0QZK8 103 aa11.63□□□□□ -0.55
VARS2-211ENST00000541562 IGHV4-38-2P0DP08 117 aa11.63□□□□□ -0.55
VARS2-211ENST00000541562 UNQ9165/PRO28630Q6UXU0 137 aa11.63□□□□□ -0.55
VARS2-211ENST00000541562 PRB1P04280 392 aa11.63□□□□□ -0.55
VARS2-211ENST00000541562 RPL7P18124 248 aaKnown RBP11.63□□□□□ -0.55
VARS2-211ENST00000541562 C10orf99Q6UWK7 81 aa11.63□□□□□ -0.55
VARS2-211ENST00000541562 PCP2Q8IVA1 136 aa11.63□□□□□ -0.55
VARS2-211ENST00000541562 C8orf31Q8N9H6 132 aa11.63□□□□□ -0.55
VARS2-211ENST00000541562 FN1P02751 2386 aaKnown RBP11.63□□□□□ -0.55
VARS2-211ENST00000541562 H3BVH4 76 aa11.62□□□□□ -0.55
VARS2-211ENST00000541562 ATP5L2Q7Z4Y8 100 aa11.62□□□□□ -0.55
VARS2-211ENST00000541562 LY6G5BQ8NDX9 201 aa11.62□□□□□ -0.55
VARS2-211ENST00000541562 C16orf92Q96LL3 132 aa11.62□□□□□ -0.55
VARS2-211ENST00000541562 AMMECR1LQ6DCA0 310 aa11.62□□□□□ -0.55
VARS2-211ENST00000541562 OR4C5Q8NGB2 326 aa11.62□□□□□ -0.55
VARS2-211ENST00000541562 C11orf21Q9P2W6 132 aa11.62□□□□□ -0.55
VARS2-211ENST00000541562 KLF5Q13887 457 aaPredicted RBP11.62□□□□□ -0.55
VARS2-211ENST00000541562 FCER1GP30273 86 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 PLP1P60201 277 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 MRPS12O15235 138 aaKnown RBP11.61□□□□□ -0.55
VARS2-211ENST00000541562 IGHG4P01861 327 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 EMP1P54849 157 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 ZNF738Q8NE65 137 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 RNASE8Q8TDE3 154 aaKnown RBP11.61□□□□□ -0.55
VARS2-211ENST00000541562 ZFP30Q9Y2G7 519 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 WI2-2373I1.2A0A1W2PRP0 233 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 HAX1O00165 279 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 CCDC140Q96MF4 163 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 AGPAT4-IT1Q9H0P7 198 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 ZNF492Q9P255 531 aa11.61□□□□□ -0.55
VARS2-211ENST00000541562 IGHV4-61A0A0C4DH41 118 aa11.6□□□□□ -0.55
VARS2-211ENST00000541562 LEPP41159 167 aa11.6□□□□□ -0.55
VARS2-211ENST00000541562 CCDC144NLQ6NUI1 221 aa11.6□□□□□ -0.55
VARS2-211ENST00000541562 SFTA2Q6UW10 78 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms