RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 M0R2P5 195 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 CD2P06729 351 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 MGST1P10620 155 aaKnown RBP3.15□□□□□ -1.91
PRKDC-209ENST00000540819 CKS2P33552 79 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 ZNF345Q14585 488 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 LINC00301Q8NCQ3 95 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 OR8B3Q8NGG8 313 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 OR5AK2Q8NH90 309 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 OTOSQ8NHW6 89 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 RAB37Q96AX2 223 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 SLC50A1Q9BRV3 221 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 AGPAT4-IT1Q9H0P7 198 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 ANAPC11Q9NYG5 84 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 TAS2R8Q9NYW2 309 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 PSORS1C2Q9UIG4 136 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 KLK12Q9UKR0 248 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 MYO16Q9Y6X6 1858 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 ABCC10Q5T3U5 1492 aa3.15□□□□□ -1.91
PRKDC-209ENST00000540819 QRICH2Q9H0J4 1663 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 HMSDA8MTL9 139 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 M0R233 179 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 HYPMO75409 117 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 PROSCO94903 275 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 NCMAPQ5T1S8 102 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 HMGN2P46Q86SG4 172 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 GKN2Q86XP6 184 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 C20orf166-AS1Q96NR2 134 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 HELZP42694 1942 aaKnown RBP3.14□□□□□ -1.91
PRKDC-209ENST00000540819 CFTRP13569 1480 aa3.14□□□□□ -1.91
PRKDC-209ENST00000540819 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
PRKDC-209ENST00000540819 IGKV2D-26A0A0A0MRZ7 120 aa3.13□□□□□ -1.91
PRKDC-209ENST00000540819 ODF3BA8MYP8 253 aa3.13□□□□□ -1.91
PRKDC-209ENST00000540819 ZNF736B4DX44 427 aaPredicted RBP3.13□□□□□ -1.91
PRKDC-209ENST00000540819 PITX3O75364 302 aa3.13□□□□□ -1.91
PRKDC-209ENST00000540819 LY6EQ16553 131 aa3.13□□□□□ -1.91
PRKDC-209ENST00000540819 OR2T35Q8NGX2 323 aa3.13□□□□□ -1.91
PRKDC-209ENST00000540819 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
PRKDC-209ENST00000540819 NDUFB11Q9NX14 153 aa3.13□□□□□ -1.91
PRKDC-209ENST00000540819 CHCHD2Q9Y6H1 151 aaPredicted RBP3.13□□□□□ -1.91
PRKDC-209ENST00000540819 RAPGEF2Q9Y4G8 1499 aa3.13□□□□□ -1.91
PRKDC-209ENST00000540819 DIDO1Q9BTC0 2240 aaKnown RBP3.13□□□□□ -1.91
PRKDC-209ENST00000540819 IGLV10-54A0A075B6I4 117 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 A6NN06 94 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 B4DSR2 109 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 G3V3Q6 166 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 KLF7O75840 302 aaPredicted RBP3.12□□□□□ -1.91
PRKDC-209ENST00000540819 CRPP02741 224 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 KRTAP1-4P0C5Y4 121 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 MIFP14174 115 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 CATR1Q13166 79 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 Q56UQ5 140 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 C1orf134Q5TEV5 83 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 ATP11AUNQ6ZP68 121 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 Q96M85 177 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 Q9BRP9 147 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 SEC11CQ9BY50 192 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 CST11Q9H112 138 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 AKAP11Q9UKA4 1901 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 KIAA1549Q9HCM3 1950 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 KIDINS220Q9ULH0 1771 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 NRKQ7Z2Y5 1582 aa3.12□□□□□ -1.91
PRKDC-209ENST00000540819 KTN1Q86UP2 1357 aaKnown RBP3.12□□□□□ -1.91
PRKDC-209ENST00000540819 PPIP5K1Q6PFW1 1433 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 ADAMTS9Q9P2N4 1935 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 STRCQ7RTU9 1775 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 TRAV1-1A0A0B4J248 108 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 HRES1P13985 223 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 ERHP84090 104 aaKnown RBP3.11□□□□□ -1.91
PRKDC-209ENST00000540819 ZNF791Q3KP31 576 aaPredicted RBP3.11□□□□□ -1.91
PRKDC-209ENST00000540819 MRPL54Q6P161 138 aaKnown RBP3.11□□□□□ -1.91
PRKDC-209ENST00000540819 SFT2D1Q8WV19 159 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 PSMF1Q92530 271 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 MUCL1Q96DR8 90 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 USP54Q70EL1 1684 aa3.11□□□□□ -1.91
PRKDC-209ENST00000540819 TMSB15BA0A087X1C1 80 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 IGHV1-24A0A0C4DH33 117 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 MUC21A0A0G2JKD1 596 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 MUC21A0A140T8X8 626 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 A0A1W2PNM2 257 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 GEMIN2O14893 280 aaKnown RBP3.1□□□□□ -1.91
PRKDC-209ENST00000540819 HINT1P49773 126 aaPredicted RBP3.1□□□□□ -1.91
PRKDC-209ENST00000540819 DSCR4P56555 118 aaPredicted RBP3.1□□□□□ -1.91
PRKDC-209ENST00000540819 COL5A1-AS1Q5SY13 56 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 ATP6V0E2Q8NHE4 81 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 SEC16AO15027 2179 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 MYO9BQ13459 2157 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 MUC4Q99102 2169 aa3.1□□□□□ -1.91
PRKDC-209ENST00000540819 SLIT3O75094 1523 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 SMARCA4P51532 1647 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 IGLV2-18A0A075B6J9 118 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 A0A087WSZ3 146 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 ZNF705FA8MVS1 300 aaPredicted RBP3.09□□□□□ -1.91
PRKDC-209ENST00000540819 E7EUB6 86 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 APOC4-APOC2K7ER74 178 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 UBL3O95164 117 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 APOC2P02655 101 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 ZNF846Q147U1 533 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 MIC13Q5XKP0 118 aa3.09□□□□□ -1.91
PRKDC-209ENST00000540819 ARPINQ7Z6K5 226 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms