RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 METTL15P1P0C7V9 234 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 TSPOP30536 169 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 AKR1C3P42330 323 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 CEBPGP53567 150 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 KRTAP10-2P60368 255 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 DAD1P61803 113 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 CCL20P78556 96 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 SERF2P84101 59 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 RRN3P1Q2M238 152 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 KHDC3LQ587J8 217 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 FLG2Q5D862 2391 aaPredicted RBP5.1□□□□□ -1.59
YBX3-209ENST00000540747 ZNF506Q5JVG8 444 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 SPANXN5Q5MJ07 72 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 C1orf194Q5T5A4 169 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 FAM78BQ5VT40 261 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 LINC00518Q8N0U6 118 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 HIST1H2BAQ96A08 127 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 TVP23CQ96ET8 276 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 C20orf173Q96LM9 149 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 IGF2BP2-AS1Q96M15 143 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 PSMG3Q9BT73 122 aaPredicted RBP5.1□□□□□ -1.59
YBX3-209ENST00000540747 HEYLQ9NQ87 328 aaPredicted RBP5.1□□□□□ -1.59
YBX3-209ENST00000540747 SLC39A9Q9NUM3 307 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 GOLT1BQ9Y3E0 138 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 LINC00588Q9Y4M8 146 aa5.1□□□□□ -1.59
YBX3-209ENST00000540747 LYRM9A8MSI8 78 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 H3BQ15 152 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 PRM2P04554 102 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 BTF3P20290 206 aaKnown RBP5.09□□□□□ -1.59
YBX3-209ENST00000540747 RAB5AP20339 215 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 TAGLN2P37802 199 aaKnown RBP5.09□□□□□ -1.59
YBX3-209ENST00000540747 ID1P41134 155 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 SLC38A11Q08AI6 406 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 ETFRF1Q6IPR1 90 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 SPATA12Q7Z6I5 190 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 ZFP82Q8N141 532 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 OR4B1Q8NGF8 309 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 MBD3L1Q8WWY6 194 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 ACY3Q96HD9 319 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 CIB3Q96Q77 187 aaPredicted RBP5.09□□□□□ -1.59
YBX3-209ENST00000540747 PARD6GQ9BYG4 376 aaPredicted RBP5.09□□□□□ -1.59
YBX3-209ENST00000540747 RBKSQ9H477 322 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 TIMM9Q9Y5J7 89 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
YBX3-209ENST00000540747 DNAH8Q96JB1 4490 aa5.09□□□□□ -1.6
YBX3-209ENST00000540747 PCP4L1A6NKN8 68 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 CEBPZOSA8MTT3 80 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 B4DEV8 164 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 MBP02144 154 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 SNRPEP62304 92 aaKnown RBP5.08□□□□□ -1.6
YBX3-209ENST00000540747 RPP30P78346 268 aaKnown RBP5.08□□□□□ -1.6
YBX3-209ENST00000540747 ZNF90Q03938 601 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 GAMTQ14353 236 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 ICAM4Q14773 271 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 LCN15Q6UWW0 184 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 OR10P1Q8NGE3 313 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 OR10G4Q8NGN3 311 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 TMEM147Q9BVK8 224 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 WDR61Q9GZS3 305 aaKnown RBP5.08□□□□□ -1.6
YBX3-209ENST00000540747 RPRMQ9NS64 109 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 DOK5Q9P104 306 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 GNG13Q9P2W3 67 aa5.08□□□□□ -1.6
YBX3-209ENST00000540747 IGKV1OR2-108A0A075B7D4 117 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 A0A087WWC5 75 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 TRAV8-2A0A0B4J237 113 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 ZNF98A6NK75 572 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 ZFP92A6NM28 416 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 ZNF705GA8MUZ8 300 aaPredicted RBP5.07□□□□□ -1.6
YBX3-209ENST00000540747 C17orf112F2Z3M2 114 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 S100A8P05109 93 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 AZU1P20160 251 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 GPX4P36969 197 aaPredicted RBP5.07□□□□□ -1.6
YBX3-209ENST00000540747 RPS10P46783 165 aaKnown RBP5.07□□□□□ -1.6
YBX3-209ENST00000540747 RAB11AP62491 216 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 ARL16Q0P5N6 197 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 SAMD13Q5VXD3 122 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 EBLN2Q6P2I7 272 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 TMEM14EPQ6UXP3 125 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 DTD1Q8TEA8 209 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 ISOC2Q96AB3 205 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 ATG101Q9BSB4 218 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 RSG1Q9BU20 258 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 ACTR3CQ9C0K3 210 aaPredicted RBP5.07□□□□□ -1.6
YBX3-209ENST00000540747 Q9H3A6 140 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 HSPB7Q9UBY9 170 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 VAX2Q9UIW0 290 aa5.07□□□□□ -1.6
YBX3-209ENST00000540747 UBE2L5PA0A1B0GUS4 154 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 MAP1LC3B2A6NCE7 125 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 CBY3A6NI87 242 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 ZNF727A8MUV8 499 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 M0R2Z0 102 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 INSP01308 110 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 ATP5G1P05496 136 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 DEFB130BP0DP73 79 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 DEFB130AP0DP74 79 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 BCL2P10415 239 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 FGF7P21781 194 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 ATP5G3P48201 142 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 MEOX2P50222 304 aa5.06□□□□□ -1.6
YBX3-209ENST00000540747 CNN1P51911 297 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms