RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 F6UB75 175 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 H3BMM0 161 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 PDE6DO43924 150 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 RAB14P61106 215 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 GNG5P63218 68 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 SRSF3P84103 164 aaKnown RBP7.77□□□□□ -1.17
VPS33A-204ENST00000540669 HAGHQ16775 308 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 GTSCR1Q86UQ5 136 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 WFDC3Q8IUB2 231 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 TMEM75Q8N9X5 138 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 RARRES2Q99969 163 aa7.77□□□□□ -1.17
VPS33A-204ENST00000540669 NBEAL2Q6ZNJ1 2754 aa7.76□□□□□ -1.17
VPS33A-204ENST00000540669 IGKV2-40A0A087WW87 121 aaPredicted RBP7.76□□□□□ -1.17
VPS33A-204ENST00000540669 FBLL1A6NHQ2 334 aaKnown RBP7.76□□□□□ -1.17
VPS33A-204ENST00000540669 F6UZH7 168 aa7.76□□□□□ -1.17
VPS33A-204ENST00000540669 IGKV2D-40P01614 121 aaPredicted RBP7.76□□□□□ -1.17
VPS33A-204ENST00000540669 SRP19P09132 144 aaKnown RBP7.76□□□□□ -1.17
VPS33A-204ENST00000540669 GIG44P09565 113 aaPredicted RBP7.76□□□□□ -1.17
VPS33A-204ENST00000540669 CRISP2P16562 243 aa7.76□□□□□ -1.17
VPS33A-204ENST00000540669 CNN1P51911 297 aaKnown RBP7.76□□□□□ -1.17
VPS33A-204ENST00000540669 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
VPS33A-204ENST00000540669 Q86TA4 180 aa7.76□□□□□ -1.17
VPS33A-204ENST00000540669 ZNF738Q8NE65 137 aa7.76□□□□□ -1.17
VPS33A-204ENST00000540669 IGF2BP2-AS1Q96M15 143 aa7.76□□□□□ -1.17
VPS33A-204ENST00000540669 PRR25Q96S07 402 aa7.76□□□□□ -1.17
VPS33A-204ENST00000540669 LENEPQ9Y5L5 61 aa7.76□□□□□ -1.17
VPS33A-204ENST00000540669 STAB2Q8WWQ8 2551 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 K7EIL1 84 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 TMEM183BQ1AE95 376 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 CST9LP1Q5W188 147 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 GOLT1AQ6ZVE7 132 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 ZFAND2AQ8N6M9 145 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 TVP23CQ96ET8 276 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 VGLL1Q99990 258 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 DERL1Q9BUN8 251 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 MLST8Q9BVC4 326 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 AGPAT4-IT1Q9H0P7 198 aa7.75□□□□□ -1.17
VPS33A-204ENST00000540669 TRAV8-1A0A0A6YYK1 113 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 KNCNA6PVL3 124 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 KLLNB2CW77 178 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 C9JCJ5 164 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 DUSP14O95147 198 aaKnown RBP7.74□□□□□ -1.17
VPS33A-204ENST00000540669 LTAP01374 205 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 IGLV2-8P01709 118 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 PRB2P02812 416 aaPredicted RBP7.74□□□□□ -1.17
VPS33A-204ENST00000540669 CT45A10P0DMU9 189 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 UQCC3Q6UW78 93 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 DEFB125Q8N687 156 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 FMC1Q96HJ9 113 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 LINC00052Q96N35 136 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 ZNF492Q9P255 531 aa7.74□□□□□ -1.17
VPS33A-204ENST00000540669 CRXO43186 299 aaPredicted RBP7.73□□□□□ -1.17
VPS33A-204ENST00000540669 IGHV4-30-4P0DP06 118 aa7.73□□□□□ -1.17
VPS33A-204ENST00000540669 CSN1S1P47710 185 aa7.73□□□□□ -1.17
VPS33A-204ENST00000540669 ZNF138P52744 262 aa7.73□□□□□ -1.17
VPS33A-204ENST00000540669 FLI1Q01543 452 aaPredicted RBP7.73□□□□□ -1.17
VPS33A-204ENST00000540669 Q8TAT8 98 aa7.73□□□□□ -1.17
VPS33A-204ENST00000540669 CMTM2Q8TAZ6 248 aa7.73□□□□□ -1.17
VPS33A-204ENST00000540669 SMIM12Q96EX1 92 aa7.73□□□□□ -1.17
VPS33A-204ENST00000540669 LINC00477Q96M19 166 aa7.73□□□□□ -1.17
VPS33A-204ENST00000540669 LINC00479Q96M42 142 aa7.73□□□□□ -1.17
VPS33A-204ENST00000540669 KIR2DL5BA0A0G2JN68 375 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 KIR2DL5BA0A0G2JPC4 375 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 S100A9P06702 114 aaKnown RBP7.72□□□□□ -1.17
VPS33A-204ENST00000540669 ZNF705DP0CH99 300 aaPredicted RBP7.72□□□□□ -1.17
VPS33A-204ENST00000540669 ZNF705BP0CI00 300 aaPredicted RBP7.72□□□□□ -1.17
VPS33A-204ENST00000540669 PRB4P10163 310 aaPredicted RBP7.72□□□□□ -1.17
VPS33A-204ENST00000540669 ADCYAP1P18509 176 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 AKR1C3P42330 323 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 RPL35P42766 123 aaKnown RBP7.72□□□□□ -1.17
VPS33A-204ENST00000540669 TAS2R60P59551 318 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 HIST1H1AQ02539 215 aaPredicted RBP7.72□□□□□ -1.17
VPS33A-204ENST00000540669 ERCC8Q13216 396 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 ACTL10Q5JWF8 245 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 PRR9Q5T870 116 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 EBLN2Q6P2I7 272 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 COMMD7Q86VX2 200 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 KIR2DL5AQ8N109 375 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 CSNK1G2-AS1Q8NCQ2 148 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 OR10J6PQ8NGY7 276 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 KIR2DL5BQ8NHK3 375 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 SLC35B3Q9H1N7 401 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 PARLQ9H300 379 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 SRD5A3Q9H8P0 318 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 PSG8Q9UQ74 426 aa7.72□□□□□ -1.17
VPS33A-204ENST00000540669 C10orf91Q5T1B1 145 aa7.71□□□□□ -1.18
VPS33A-204ENST00000540669 EIF5A2Q9GZV4 153 aaKnown RBP7.71□□□□□ -1.18
VPS33A-204ENST00000540669 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.18
VPS33A-204ENST00000540669 TRAV34A0A0B4J273 112 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 K7EQM0 130 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 RBMY1A1P0DJD3 496 aaKnown RBP7.7□□□□□ -1.18
VPS33A-204ENST00000540669 RBMY1CP0DJD4 496 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 KIR3DS1Q14943 382 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 PEA15Q15121 130 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 RBMY1FQ15415 496 aaKnown RBP7.7□□□□□ -1.18
VPS33A-204ENST00000540669 CENPWQ5EE01 88 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 TMEM78Q5T7P6 136 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 GFI1BQ5VTD9 330 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 Q6AWC8 147 aa7.7□□□□□ -1.18
VPS33A-204ENST00000540669 MORN3Q6PF18 240 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms