RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 HIST1H1AQ02539 215 aaPredicted RBP6.33□□□□□ -1.4
C2CD3-215ENST00000540452 LINC01559Q495D7 138 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 PRR27Q6MZM9 219 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 UNQ9165/PRO28630Q6UXU0 137 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 NHLRC2Q8NBF2 726 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 OR2D3Q8NGH3 330 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 ZNF418Q8TF45 676 aaPredicted RBP6.33□□□□□ -1.4
C2CD3-215ENST00000540452 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 ODF3Q96PU9 254 aa6.33□□□□□ -1.4
C2CD3-215ENST00000540452 MRPL18Q9H0U6 180 aaKnown RBP6.33□□□□□ -1.4
C2CD3-215ENST00000540452 TRAV8-2A0A0B4J237 113 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 DNAJC9-AS1A6NH13 148 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 F2Z2F3 143 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 TRBV12-3P01733 135 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 IGHV3-11P01762 117 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 FOSL1P15407 271 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 CRISP2P16562 243 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 S100A2P29034 98 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 NDUFA6P56556 154 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 RIGQ13278 110 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 LINC00322Q6ZN03 302 aaPredicted RBP6.32□□□□□ -1.4
C2CD3-215ENST00000540452 APRG1Q8IVJ8 170 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 LINC00518Q8N0U6 118 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 HIST3H2BBQ8N257 126 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 KLHDC1Q8N7A1 406 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 OR10J6PQ8NGY7 276 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 BORCS7Q96B45 105 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 RHPN1-AS1Q9BWJ2 59 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 PEMTQ9UBM1 199 aa6.32□□□□□ -1.4
C2CD3-215ENST00000540452 IGKV2-40A0A087WW87 121 aaPredicted RBP6.31□□□□□ -1.4
C2CD3-215ENST00000540452 M0QZ24 198 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 SMAD7O15105 426 aaKnown RBP6.31□□□□□ -1.4
C2CD3-215ENST00000540452 NDUFA7O95182 113 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 IGKV2D-40P01614 121 aaPredicted RBP6.31□□□□□ -1.4
C2CD3-215ENST00000540452 APCSP02743 223 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 APOHP02749 345 aaPredicted RBP6.31□□□□□ -1.4
C2CD3-215ENST00000540452 RPLP1P05386 114 aaKnown RBP6.31□□□□□ -1.4
C2CD3-215ENST00000540452 SNRPCP09234 159 aaKnown RBP6.31□□□□□ -1.4
C2CD3-215ENST00000540452 CTRLP40313 264 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 HILS1P60008 231 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 PAFAH1B2P68402 229 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 KLF5Q13887 457 aaPredicted RBP6.31□□□□□ -1.4
C2CD3-215ENST00000540452 ZNF493Q6ZR52 646 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 SPATA3Q8NHX4 192 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 TMEM18Q96B42 140 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 CSMD2Q7Z408 3487 aa6.31□□□□□ -1.4
C2CD3-215ENST00000540452 PDZD2O15018 2839 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 TMEM213A2RRL7 107 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 TMEM189A5PLL7 270 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 LINC01619G3V211 115 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 SH2D1AO60880 128 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 MED14OSP0DP75 135 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 CBLN1P23435 193 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 CRIP1P50238 77 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 SNRPD3P62318 126 aaKnown RBP6.3□□□□□ -1.4
C2CD3-215ENST00000540452 TMEM95Q3KNT9 176 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 Q6ZSV7 163 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 IL17RELQ6ZVW7 336 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 DCANP1Q8TF63 244 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 GTSF1Q8WW33 167 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 FAM19A4Q96LR4 140 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 VGLL1Q99990 258 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 SIGLEC8Q9NYZ4 499 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 SVEP1Q4LDE5 3571 aa6.3□□□□□ -1.4
C2CD3-215ENST00000540452 NIPBLQ6KC79 2804 aaeCLIP6.29□□□□□ -1.4
C2CD3-215ENST00000540452 IGHV3OR16-8A0A075B7F1 116 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 FAM181BA6NEQ2 426 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 ZNF207O43670 478 aaKnown RBP6.29□□□□□ -1.4
C2CD3-215ENST00000540452 CA1P00915 261 aaPredicted RBP6.29□□□□□ -1.4
C2CD3-215ENST00000540452 IGLC6P0CF74 106 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 SRD5A1P18405 259 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 RAB4AP20338 218 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 HOXD3P31249 432 aaPredicted RBP6.29□□□□□ -1.4
C2CD3-215ENST00000540452 AKR1D1P51857 326 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 TCL1AP56279 114 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 MRPL54Q6P161 138 aaKnown RBP6.29□□□□□ -1.4
C2CD3-215ENST00000540452 TCF24Q7RTU0 167 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 ZNF738Q8NE65 137 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 SGK494Q96LW2 274 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 AGPAT4-IT1Q9H0P7 198 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 YAE1D1Q9NRH1 226 aa6.29□□□□□ -1.4
C2CD3-215ENST00000540452 TRAV25A0A0B4J276 109 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 TRAV21A0A0B4J279 112 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 A0A1B0GUS0 222 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 C2orf70A6NJV1 201 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 K7EQG2 157 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 S100A12P80511 92 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 FHL3Q13643 280 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 TM4SF20Q53R12 229 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 OR8A1Q8NGG7 326 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 C8orf49Q96NF6 230 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 LAMTOR2Q9Y2Q5 125 aa6.28□□□□□ -1.4
C2CD3-215ENST00000540452 FN1P02751 2386 aaKnown RBP6.27□□□□□ -1.41
C2CD3-215ENST00000540452 IGHV4-4A0A075B6R2 117 aa6.27□□□□□ -1.41
C2CD3-215ENST00000540452 IGHV4OR15-8A0A075B7B6 117 aa6.27□□□□□ -1.41
C2CD3-215ENST00000540452 A0A087WW49 117 aa6.27□□□□□ -1.41
C2CD3-215ENST00000540452 IGHV3-66A0A0C4DH42 116 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms