RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 BRK1Q8WUW1 75 aa8.79□□□□□ -1
PBX1-212ENST00000540236 hADV29S1A0JD25 119 aa8.79□□□□□ -1
PBX1-212ENST00000540236 CRIP2P52943 208 aaPredicted RBP8.79□□□□□ -1
PBX1-212ENST00000540236 PATE2Q6UY27 113 aa8.79□□□□□ -1
PBX1-212ENST00000540236 FAM19A5Q7Z5A7 132 aaPredicted RBP8.79□□□□□ -1
PBX1-212ENST00000540236 C1orf162Q8NEQ5 155 aaPredicted RBP8.79□□□□□ -1
PBX1-212ENST00000540236 GAS8-AS1O95177 125 aa8.78□□□□□ -1
PBX1-212ENST00000540236 TRGV3P03979 118 aa8.78□□□□□ -1
PBX1-212ENST00000540236 COX6A1P12074 109 aa8.78□□□□□ -1
PBX1-212ENST00000540236 SHANK1Q9Y566 2161 aa8.78□□□□□ -1
PBX1-212ENST00000540236 PRB2P02812 416 aaPredicted RBP8.78□□□□□ -1
PBX1-212ENST00000540236 TRBV6-6A0A0A6YYG2 114 aa8.78□□□□□ -1
PBX1-212ENST00000540236 ASIPP42127 132 aa8.78□□□□□ -1
PBX1-212ENST00000540236 KHDC1LQ5JSQ8 128 aa8.78□□□□□ -1
PBX1-212ENST00000540236 IGHV1OR15-9A0A0B4J2B8 117 aa8.78□□□□□ -1
PBX1-212ENST00000540236 CFAP126Q5VTH2 177 aa8.78□□□□□ -1
PBX1-212ENST00000540236 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
PBX1-212ENST00000540236 A0A087WWL8 130 aa8.78□□□□□ -1
PBX1-212ENST00000540236 PRSS46E5RG02 174 aa8.78□□□□□ -1
PBX1-212ENST00000540236 Q8N8P6 123 aa8.78□□□□□ -1
PBX1-212ENST00000540236 BRWD1-AS2P59051 145 aa8.77□□□□□ -1
PBX1-212ENST00000540236 TMEM14BQ9NUH8 114 aa8.77□□□□□ -1
PBX1-212ENST00000540236 SCN10AQ9Y5Y9 1956 aa8.77□□□□□ -1.01
PBX1-212ENST00000540236 DNAL4O96015 105 aa8.77□□□□□ -1.01
PBX1-212ENST00000540236 GGNQ86UU5 652 aa8.77□□□□□ -1.01
PBX1-212ENST00000540236 INS-IGF2F8WCM5 200 aa8.77□□□□□ -1.01
PBX1-212ENST00000540236 SRD5A1P18405 259 aa8.77□□□□□ -1.01
PBX1-212ENST00000540236 DAND5Q8N907 189 aa8.77□□□□□ -1.01
PBX1-212ENST00000540236 TP53TG1Q9Y2A0 90 aa8.77□□□□□ -1.01
PBX1-212ENST00000540236 TNFRSF18Q9Y5U5 241 aa8.77□□□□□ -1.01
PBX1-212ENST00000540236 CABIN1Q9Y6J0 2220 aa8.77□□□□□ -1.01
PBX1-212ENST00000540236 LAMTOR5O43504 91 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 EGR2P11161 476 aaPredicted RBP8.76□□□□□ -1.01
PBX1-212ENST00000540236 A0A1W2PPI3 338 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 SP5Q6BEB4 398 aaPredicted RBP8.76□□□□□ -1.01
PBX1-212ENST00000540236 MUSTN1Q8IVN3 82 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 FAM167A-AS1Q96KT0 104 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 PPP1R17O96001 155 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 IGLC6P0CF74 106 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 TAL2Q16559 108 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 RNF125Q96EQ8 232 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 TRAV12-1A0A0B4J245 112 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 TINCRA0A1B0GVN0 87 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 B9A039 149 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 MRPS12O15235 138 aaKnown RBP8.76□□□□□ -1.01
PBX1-212ENST00000540236 CRYGCP07315 174 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 LTBRP36941 435 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 A0A1B0GX51 115 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 C16orf97H3BN30 126 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 DSCAML1Q8TD84 2053 aa8.76□□□□□ -1.01
PBX1-212ENST00000540236 M0R1W7 72 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 C1orf159Q96HA4 380 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 FAM90A9PA6NNJ1 464 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 VWCEQ96DN2 955 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 CFC1BP0CG36 223 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 CFC1P0CG37 223 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
PBX1-212ENST00000540236 IMMP1LQ96LU5 166 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 C11orf68Q9H3H3 251 aaKnown RBP8.75□□□□□ -1.01
PBX1-212ENST00000540236 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 F5H768 121 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 NDUFA11Q86Y39 141 aa8.75□□□□□ -1.01
PBX1-212ENST00000540236 RITA1Q96K30 269 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 MRPL36Q9P0J6 103 aaKnown RBP8.74□□□□□ -1.01
PBX1-212ENST00000540236 HIGD1BQ9P298 99 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 IGKV1D-17A0A075B6S4 117 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 E7EUB6 86 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 DGAT2L7PQ6IED9 249 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 TDHQ8IZJ6 230 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 C2orf66Q6UXQ4 117 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 C3orf22Q8N5N4 141 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 RHODO00212 210 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 ORMDL2Q53FV1 153 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 IGHV1-2P23083 117 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 SPRNQ5BIV9 151 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 CT83Q5H943 113 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 ATP1A1-AS1Q5TC04 95 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 ZNF493Q6ZR52 646 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 SLC25A45Q8N413 288 aa8.74□□□□□ -1.01
PBX1-212ENST00000540236 ADAMTS9Q9P2N4 1935 aa8.73□□□□□ -1.01
PBX1-212ENST00000540236 WT1-ASQ06250 92 aa8.73□□□□□ -1.01
PBX1-212ENST00000540236 FHL3Q13643 280 aa8.73□□□□□ -1.01
PBX1-212ENST00000540236 CFHR4Q92496 578 aa8.73□□□□□ -1.01
PBX1-212ENST00000540236 SDIM1Q6ZPB5 146 aa8.73□□□□□ -1.01
PBX1-212ENST00000540236 NDUFA7O95182 113 aa8.73□□□□□ -1.01
PBX1-212ENST00000540236 LINC01620Q4KN68 170 aa8.73□□□□□ -1.01
PBX1-212ENST00000540236 C1orf229Q6ZS94 237 aaPredicted RBP8.73□□□□□ -1.01
PBX1-212ENST00000540236 HOXD3P31249 432 aaPredicted RBP8.72□□□□□ -1.01
PBX1-212ENST00000540236 XIRP2A4UGR9 3374 aa8.72□□□□□ -1.01
PBX1-212ENST00000540236 Q8N7P7 452 aa8.72□□□□□ -1.01
PBX1-212ENST00000540236 TMEM131Q92545 1883 aa8.72□□□□□ -1.01
PBX1-212ENST00000540236 IQCF6A8MYZ5 107 aa8.72□□□□□ -1.01
PBX1-212ENST00000540236 F8VRH5 84 aa8.72□□□□□ -1.01
PBX1-212ENST00000540236 THADAQ6YHU6 1953 aa8.72□□□□□ -1.01
PBX1-212ENST00000540236 HCFC1P51610 2035 aa8.72□□□□□ -1.01
PBX1-212ENST00000540236 TM4SF4P48230 202 aa8.72□□□□□ -1.01
PBX1-212ENST00000540236 EP400Q96L91 3159 aa8.71□□□□□ -1.01
PBX1-212ENST00000540236 CENPVL3A0A0U1RRI6 287 aa8.71□□□□□ -1.01
PBX1-212ENST00000540236 SUMO2P61956 95 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms