RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 IGHV3-35A0A0C4DH35 117 aa13□□□□□ -0.33
COPS3-212ENST00000539941 C9JCJ5 164 aa13□□□□□ -0.33
COPS3-212ENST00000539941 CRYBB3P26998 211 aa13□□□□□ -0.33
COPS3-212ENST00000539941 KRTDAPP60985 99 aa13□□□□□ -0.33
COPS3-212ENST00000539941 PDE6HQ13956 83 aa13□□□□□ -0.33
COPS3-212ENST00000539941 LYPD1Q8N2G4 141 aa13□□□□□ -0.33
COPS3-212ENST00000539941 Q8N976 141 aa13□□□□□ -0.33
COPS3-212ENST00000539941 MYOZ3Q8TDC0 251 aa13□□□□□ -0.33
COPS3-212ENST00000539941 GPR82Q96P67 336 aa13□□□□□ -0.33
COPS3-212ENST00000539941 DUX5Q96PT3 197 aa13□□□□□ -0.33
COPS3-212ENST00000539941 DERL1Q9BUN8 251 aa13□□□□□ -0.33
COPS3-212ENST00000539941 GNB1LQ9BYB4 327 aa13□□□□□ -0.33
COPS3-212ENST00000539941 CST9LQ9H4G1 147 aa13□□□□□ -0.33
COPS3-212ENST00000539941 OTORQ9NRC9 128 aa13□□□□□ -0.33
COPS3-212ENST00000539941 LY96Q9Y6Y9 160 aa13□□□□□ -0.33
COPS3-212ENST00000539941 TRBV19A0A075B6N1 114 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 CLPSL1A2RUU4 121 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 IGHV3-11P01762 117 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 C5orf17Q8NAS9 161 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 KCNS1Q96KK3 526 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 IL36BQ9NZH7 164 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 HELTA6NFD8 242 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 LINC00310P59036 64 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 VAMP3Q15836 100 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 OR10G8Q8NGN5 311 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 Q9H3A6 140 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 SERTAD4Q9NUC0 356 aa12.99□□□□□ -0.33
COPS3-212ENST00000539941 SONP18583 2426 aaKnown RBP12.98□□□□□ -0.33
COPS3-212ENST00000539941 HIVEP2P31629 2446 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 PGPA6NDG6 321 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 PEX7O00628 323 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 BUB3O43684 328 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 TRBV12-3P01733 135 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 SRD5A1P18405 259 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 LCNL1Q6ZST4 164 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 OR8I2Q8N0Y5 310 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 PEF1Q9UBV8 284 aaKnown RBP12.98□□□□□ -0.33
COPS3-212ENST00000539941 EPDR1Q9UM22 224 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 U3KQE9 123 aa12.98□□□□□ -0.33
COPS3-212ENST00000539941 SLC25A5P05141 298 aaKnown RBP12.97□□□□□ -0.33
COPS3-212ENST00000539941 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
COPS3-212ENST00000539941 NRN1Q9NPD7 142 aa12.97□□□□□ -0.33
COPS3-212ENST00000539941 TRBV20OR9-2A0A075B6H5 130 aa12.96□□□□□ -0.33
COPS3-212ENST00000539941 GRIFINA4D1Z8 144 aa12.96□□□□□ -0.33
COPS3-212ENST00000539941 FAM181BA6NEQ2 426 aa12.96□□□□□ -0.33
COPS3-212ENST00000539941 RNASE1P07998 156 aaKnown RBP12.96□□□□□ -0.33
COPS3-212ENST00000539941 PRR27Q6MZM9 219 aa12.96□□□□□ -0.33
COPS3-212ENST00000539941 TCF24Q7RTU0 167 aa12.96□□□□□ -0.33
COPS3-212ENST00000539941 ESM1Q9NQ30 184 aa12.96□□□□□ -0.33
COPS3-212ENST00000539941 JMJD1CQ15652 2540 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 IGHV3OR16-8A0A075B7F1 116 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 A0A1B0GUS0 222 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 BMI1P35226 326 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 GNG4P50150 75 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 C10orf99Q6UWK7 81 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 SIGLEC15Q6ZMC9 328 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 Q6ZSV7 163 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 BORCS7Q96B45 105 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 UBE2E2Q96LR5 201 aa12.96□□□□□ -0.34
COPS3-212ENST00000539941 A0A087X0K7 114 aa12.95□□□□□ -0.34
COPS3-212ENST00000539941 INAFM1C9JVW0 142 aa12.95□□□□□ -0.34
COPS3-212ENST00000539941 H3BTX0 84 aa12.95□□□□□ -0.34
COPS3-212ENST00000539941 PSG9Q00887 426 aa12.95□□□□□ -0.34
COPS3-212ENST00000539941 TRAV9-2A0A087WT02 112 aa12.94□□□□□ -0.34
COPS3-212ENST00000539941 LGALS1P09382 135 aaKnown RBP12.94□□□□□ -0.34
COPS3-212ENST00000539941 AMTP48728 403 aa12.94□□□□□ -0.34
COPS3-212ENST00000539941 HINT1P49773 126 aaPredicted RBP12.94□□□□□ -0.34
COPS3-212ENST00000539941 CENPWQ5EE01 88 aa12.94□□□□□ -0.34
COPS3-212ENST00000539941 NIT1Q86X76 327 aa12.94□□□□□ -0.34
COPS3-212ENST00000539941 GPHB5Q86YW7 130 aa12.94□□□□□ -0.34
COPS3-212ENST00000539941 RPH3ALQ9UNE2 315 aa12.94□□□□□ -0.34
COPS3-212ENST00000539941 KLF12Q9Y4X4 402 aa12.94□□□□□ -0.34
COPS3-212ENST00000539941 ZNF324O75467 553 aaPredicted RBP12.93□□□□□ -0.34
COPS3-212ENST00000539941 TCRAP04437 139 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 HILS1P60008 231 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 FAM106AQ4KMX7 169 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 OCC1Q8TAD7 63 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 IGF2BP2-AS1Q96M15 143 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 C17orf77Q96MU5 243 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 AAMDCQ9H7C9 122 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 CBLN1P23435 193 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 RPEL1Q2QD12 228 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 UNQ9165/PRO28630Q6UXU0 137 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 PRIMA1Q86XR5 153 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
COPS3-212ENST00000539941 A0A1W2PS18 150 aa12.92□□□□□ -0.34
COPS3-212ENST00000539941 K7EMT4 169 aa12.92□□□□□ -0.34
COPS3-212ENST00000539941 SLC17A3O00476 420 aa12.92□□□□□ -0.34
COPS3-212ENST00000539941 CD33P20138 364 aa12.92□□□□□ -0.34
COPS3-212ENST00000539941 GNG5P63218 68 aa12.92□□□□□ -0.34
COPS3-212ENST00000539941 C16orf54Q6UWD8 224 aa12.92□□□□□ -0.34
COPS3-212ENST00000539941 EXOC3-AS1Q8N2X6 119 aa12.92□□□□□ -0.34
COPS3-212ENST00000539941 GRAMD2BQ96HH9 432 aa12.92□□□□□ -0.34
COPS3-212ENST00000539941 FMC1Q96HJ9 113 aa12.92□□□□□ -0.34
COPS3-212ENST00000539941 PGPEP1LA6NFU8 196 aa12.91□□□□□ -0.34
COPS3-212ENST00000539941 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
COPS3-212ENST00000539941 UBE2G1P62253 170 aa12.91□□□□□ -0.34
COPS3-212ENST00000539941 FAM162BQ5T6X4 162 aa12.91□□□□□ -0.34
COPS3-212ENST00000539941 C12orf54Q6X4T0 127 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms