RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ZNF705BP0CI00 300 aaPredicted RBP12.07□□□□□ -0.48
TRAF3-204ENST00000539721 LINC01551Q86U37 167 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 CLRN3Q8NCR9 226 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 WFDC9Q8NEX5 89 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 OR8A1Q8NGG7 326 aa12.07□□□□□ -0.48
TRAF3-204ENST00000539721 DEFB131AP59861 70 aa12.06□□□□□ -0.48
TRAF3-204ENST00000539721 HIST1H1AQ02539 215 aaPredicted RBP12.06□□□□□ -0.48
TRAF3-204ENST00000539721 TMEM78Q5T7P6 136 aa12.06□□□□□ -0.48
TRAF3-204ENST00000539721 Q8TAT8 98 aa12.06□□□□□ -0.48
TRAF3-204ENST00000539721 ASCL2Q99929 193 aa12.06□□□□□ -0.48
TRAF3-204ENST00000539721 IGLV2-8P01709 118 aa12.05□□□□□ -0.48
TRAF3-204ENST00000539721 MGST1P10620 155 aaKnown RBP12.05□□□□□ -0.48
TRAF3-204ENST00000539721 C9orf47Q6ZRZ4 202 aa12.05□□□□□ -0.48
TRAF3-204ENST00000539721 AGPAT4-IT1Q9H0P7 198 aa12.05□□□□□ -0.48
TRAF3-204ENST00000539721 MAP6D1Q9H9H5 199 aa12.05□□□□□ -0.48
TRAF3-204ENST00000539721 ZFP30Q9Y2G7 519 aa12.05□□□□□ -0.48
TRAF3-204ENST00000539721 STAB1Q9NY15 2570 aa12.05□□□□□ -0.48
TRAF3-204ENST00000539721 NPIPB6E9PJ23 425 aa12.05□□□□□ -0.48
TRAF3-204ENST00000539721 EBLN2Q6P2I7 272 aa12.05□□□□□ -0.48
TRAF3-204ENST00000539721 SMIM12Q96EX1 92 aa12.05□□□□□ -0.48
TRAF3-204ENST00000539721 COL6A5A8TX70 2615 aa12.04□□□□□ -0.48
TRAF3-204ENST00000539721 K7EN84 100 aa12.04□□□□□ -0.48
TRAF3-204ENST00000539721 ZNF138P52744 262 aa12.04□□□□□ -0.48
TRAF3-204ENST00000539721 TMEM183AQ8IXX5 376 aa12.04□□□□□ -0.48
TRAF3-204ENST00000539721 MDFIQ99750 246 aa12.04□□□□□ -0.48
TRAF3-204ENST00000539721 NDFIP1Q9BT67 221 aa12.04□□□□□ -0.48
TRAF3-204ENST00000539721 IGLL1P15814 213 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 SAPCD1Q5SSQ6 148 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 GDF5OSQ5U4N7 250 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 ATRAIDQ6UW56 229 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 FOXI2Q6ZQN5 318 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 ISOC2Q96AB3 205 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 PRR25Q96S07 402 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 MLST8Q9BVC4 326 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 SAV1Q9H4B6 383 aaPredicted RBP12.03□□□□□ -0.48
TRAF3-204ENST00000539721 VWFP04275 2813 aa12.03□□□□□ -0.48
TRAF3-204ENST00000539721 A0A0J9YX75 114 aa12.02□□□□□ -0.48
TRAF3-204ENST00000539721 OR5I1Q13606 314 aa12.02□□□□□ -0.48
TRAF3-204ENST00000539721 C8orf49Q96NF6 230 aa12.02□□□□□ -0.48
TRAF3-204ENST00000539721 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.48
TRAF3-204ENST00000539721 ZNF492Q9P255 531 aa12.02□□□□□ -0.48
TRAF3-204ENST00000539721 C7orf77A4D0Y5 90 aa12.02□□□□□ -0.49
TRAF3-204ENST00000539721 B4DEV8 164 aa12.02□□□□□ -0.49
TRAF3-204ENST00000539721 GCGP01275 180 aa12.02□□□□□ -0.49
TRAF3-204ENST00000539721 CMC4P56277 68 aaPredicted RBP12.02□□□□□ -0.49
TRAF3-204ENST00000539721 RHEBQ15382 184 aa12.02□□□□□ -0.49
TRAF3-204ENST00000539721 BEAN1Q3B7T3 259 aa12.02□□□□□ -0.49
TRAF3-204ENST00000539721 ODF3L2Q3SX64 289 aa12.02□□□□□ -0.49
TRAF3-204ENST00000539721 PRR27Q6MZM9 219 aa12.02□□□□□ -0.49
TRAF3-204ENST00000539721 RPS10P5Q9NQ39 176 aa12.02□□□□□ -0.49
TRAF3-204ENST00000539721 SORL1Q92673 2214 aa12.01□□□□□ -0.49
TRAF3-204ENST00000539721 KNCNA6PVL3 124 aa12.01□□□□□ -0.49
TRAF3-204ENST00000539721 OR11H12B2RN74 326 aa12.01□□□□□ -0.49
TRAF3-204ENST00000539721 DUSP14O95147 198 aaKnown RBP12.01□□□□□ -0.49
TRAF3-204ENST00000539721 CT45A10P0DMU9 189 aa12.01□□□□□ -0.49
TRAF3-204ENST00000539721 APRG1Q8IVJ8 170 aa12.01□□□□□ -0.49
TRAF3-204ENST00000539721 ZC2HC1AQ96GY0 325 aa12.01□□□□□ -0.49
TRAF3-204ENST00000539721 PPP1R14DQ9NXH3 145 aa12.01□□□□□ -0.49
TRAF3-204ENST00000539721 ZNF124Q15973 351 aa12□□□□□ -0.49
TRAF3-204ENST00000539721 ACTL10Q5JWF8 245 aa12□□□□□ -0.49
TRAF3-204ENST00000539721 OR4B1Q8NGF8 309 aa12□□□□□ -0.49
TRAF3-204ENST00000539721 BIN3Q9NQY0 253 aa12□□□□□ -0.49
TRAF3-204ENST00000539721 CD7P09564 240 aa12□□□□□ -0.49
TRAF3-204ENST00000539721 RNF212Q495C1 297 aa12□□□□□ -0.49
TRAF3-204ENST00000539721 SFRP2Q96HF1 295 aa12□□□□□ -0.49
TRAF3-204ENST00000539721 LENEPQ9Y5L5 61 aa12□□□□□ -0.49
TRAF3-204ENST00000539721 IGKV3-20P01619 116 aa11.99□□□□□ -0.49
TRAF3-204ENST00000539721 MT-ND4LP03901 98 aa11.99□□□□□ -0.49
TRAF3-204ENST00000539721 HLA-DRB4P13762 266 aa11.99□□□□□ -0.49
TRAF3-204ENST00000539721 ERVFC1-1P60608 527 aa11.99□□□□□ -0.49
TRAF3-204ENST00000539721 SMUG1Q53HV7 270 aa11.99□□□□□ -0.49
TRAF3-204ENST00000539721 PRR31Q5SQ13 230 aa11.99□□□□□ -0.49
TRAF3-204ENST00000539721 HLA-DRB4X5D2U9 266 aa11.99□□□□□ -0.49
TRAF3-204ENST00000539721 SCO1O75880 301 aa11.98□□□□□ -0.49
TRAF3-204ENST00000539721 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
TRAF3-204ENST00000539721 IBA57Q5T440 356 aaKnown RBP11.98□□□□□ -0.49
TRAF3-204ENST00000539721 COX8CQ7Z4L0 72 aa11.98□□□□□ -0.49
TRAF3-204ENST00000539721 RNASE7Q9H1E1 156 aaKnown RBP11.98□□□□□ -0.49
TRAF3-204ENST00000539721 TRRAPQ9Y4A5 3859 aa11.98□□□□□ -0.49
TRAF3-204ENST00000539721 AGRNO00468 2067 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 WIPF1O43516 503 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 C15orf54Q8N8G6 183 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 OR10G8Q8NGN5 311 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 DAZAP1Q96EP5 407 aaKnown RBP11.97□□□□□ -0.49
TRAF3-204ENST00000539721 FAM19A4Q96LR4 140 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 FAM110AQ9BQ89 295 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 A0A087WWC5 75 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 TRBV7-9A0A0J9YWB2 115 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 H3BMM0 161 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 J3KRW8 73 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 LINC00322Q6ZN03 302 aaPredicted RBP11.97□□□□□ -0.49
TRAF3-204ENST00000539721 GTSCR1Q86UQ5 136 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 ANAPC16Q96DE5 110 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 OSTCQ9NRP0 149 aa11.97□□□□□ -0.49
TRAF3-204ENST00000539721 PPP1R2P9O14990 202 aa11.96□□□□□ -0.49
TRAF3-204ENST00000539721 LEPP41159 167 aa11.96□□□□□ -0.49
TRAF3-204ENST00000539721 FAM231DQ6ZW35 169 aa11.96□□□□□ -0.49
TRAF3-204ENST00000539721 NUDT10Q8NFP7 164 aa11.96□□□□□ -0.49
TRAF3-204ENST00000539721 NUDT11Q96G61 164 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms