RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 NEU1Q99519 415 aa9.52□□□□□ -0.89
COPS7A-207ENST00000538375 AGPAT4-IT1Q9H0P7 198 aa9.52□□□□□ -0.89
COPS7A-207ENST00000538375 BCL2L11O43521 198 aa9.51□□□□□ -0.89
COPS7A-207ENST00000538375 CXorf1O96002 111 aa9.51□□□□□ -0.89
COPS7A-207ENST00000538375 GCHFRP30047 84 aa9.51□□□□□ -0.89
COPS7A-207ENST00000538375 KIR3DS1Q14943 382 aa9.51□□□□□ -0.89
COPS7A-207ENST00000538375 ZNF767PQ75MW2 155 aa9.51□□□□□ -0.89
COPS7A-207ENST00000538375 RXFP4Q8TDU9 374 aa9.51□□□□□ -0.89
COPS7A-207ENST00000538375 VGLL1Q99990 258 aa9.51□□□□□ -0.89
COPS7A-207ENST00000538375 OTORQ9NRC9 128 aa9.51□□□□□ -0.89
COPS7A-207ENST00000538375 STARD9Q9P2P6 4700 aa9.51□□□□□ -0.89
COPS7A-207ENST00000538375 TRAV12-3A0A0B4J271 114 aa9.5□□□□□ -0.89
COPS7A-207ENST00000538375 LOC102723971A0A1B0GUV8 181 aa9.5□□□□□ -0.89
COPS7A-207ENST00000538375 TMEM189A5PLL7 270 aa9.5□□□□□ -0.89
COPS7A-207ENST00000538375 GPX1P07203 203 aa9.5□□□□□ -0.89
COPS7A-207ENST00000538375 EIF5AP63241 154 aaKnown RBP9.5□□□□□ -0.89
COPS7A-207ENST00000538375 C9orf47Q6ZRZ4 202 aa9.5□□□□□ -0.89
COPS7A-207ENST00000538375 AKAP14Q86UN6 197 aa9.5□□□□□ -0.89
COPS7A-207ENST00000538375 TCTE3Q8IZS6 198 aa9.5□□□□□ -0.89
COPS7A-207ENST00000538375 PHLDA1Q8WV24 401 aaPredicted RBP9.5□□□□□ -0.89
COPS7A-207ENST00000538375 TMEM167BQ9NRX6 74 aa9.5□□□□□ -0.89
COPS7A-207ENST00000538375 LYSTQ99698 3801 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 NUPR2A6NF83 97 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 DIRC3C9JPN6 131 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 SLC25A5P05141 298 aaKnown RBP9.49□□□□□ -0.89
COPS7A-207ENST00000538375 SPART-AS1P0CW21 52 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 RNASE4P34096 147 aaKnown RBP9.49□□□□□ -0.89
COPS7A-207ENST00000538375 FGF8P55075 233 aaPredicted RBP9.49□□□□□ -0.89
COPS7A-207ENST00000538375 GFI1BQ5VTD9 330 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 CEMP1Q6PRD7 247 aaPredicted RBP9.49□□□□□ -0.89
COPS7A-207ENST00000538375 SSX7Q7RTT5 188 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 TMEM256Q8N2U0 113 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 NIPSNAP3BQ9BS92 247 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 CELA1Q9UNI1 258 aa9.49□□□□□ -0.89
COPS7A-207ENST00000538375 KLK5Q9Y337 293 aaPredicted RBP9.49□□□□□ -0.89
COPS7A-207ENST00000538375 H7BYZ3 331 aa9.48□□□□□ -0.89
COPS7A-207ENST00000538375 AZU1P20160 251 aa9.48□□□□□ -0.89
COPS7A-207ENST00000538375 ZNF138P52744 262 aa9.48□□□□□ -0.89
COPS7A-207ENST00000538375 TAS2R60P59551 318 aa9.48□□□□□ -0.89
COPS7A-207ENST00000538375 SUMO1P63165 101 aaKnown RBP9.48□□□□□ -0.89
COPS7A-207ENST00000538375 ZNF726P1Q15940 193 aa9.48□□□□□ -0.89
COPS7A-207ENST00000538375 LGALSLQ3ZCW2 172 aaPredicted RBP9.48□□□□□ -0.89
COPS7A-207ENST00000538375 CCDC28AQ8IWP9 274 aa9.48□□□□□ -0.89
COPS7A-207ENST00000538375 Q8TAT8 98 aa9.48□□□□□ -0.89
COPS7A-207ENST00000538375 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
COPS7A-207ENST00000538375 ZNF492Q9P255 531 aa9.48□□□□□ -0.89
COPS7A-207ENST00000538375 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
COPS7A-207ENST00000538375 C7orf71A4D174 169 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 C1QBP02746 253 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 SEC11BP0C7V7 166 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 TPT1P13693 172 aaKnown RBP9.47□□□□□ -0.89
COPS7A-207ENST00000538375 GNG5P63218 68 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 CD300CQ08708 224 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 FAM222AQ5U5X8 452 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 GOLT1AQ6ZVE7 132 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 STOML3Q8TAV4 291 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 C20orf144Q9BQM9 153 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 TMPRSS5Q9H3S3 457 aa9.47□□□□□ -0.89
COPS7A-207ENST00000538375 HYDINQ4G0P3 5121 aa9.46□□□□□ -0.89
COPS7A-207ENST00000538375 CSMD3Q7Z407 3707 aa9.46□□□□□ -0.89
COPS7A-207ENST00000538375 A0A1B0GVG6 124 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 RBAKDNA6NC62 111 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 MAP1LC3B2A6NCE7 125 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 FHITP49789 147 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 UBE2G2P60604 165 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 BTN1A1Q13410 526 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 C12orf74Q32Q52 190 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 Q6ZTC4 211 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 FAM213BQ8TBF2 198 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 TMED6Q8WW62 240 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 MAP1LC3BQ9GZQ8 125 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 DKK2Q9UBU2 259 aa9.46□□□□□ -0.9
COPS7A-207ENST00000538375 A0A1B0GV50 99 aa9.45□□□□□ -0.9
COPS7A-207ENST00000538375 UMAD1C9J7I0 102 aa9.45□□□□□ -0.9
COPS7A-207ENST00000538375 C11orf94C9JXX5 98 aa9.45□□□□□ -0.9
COPS7A-207ENST00000538375 IFNA7P01567 189 aa9.45□□□□□ -0.9
COPS7A-207ENST00000538375 SUN5Q8TC36 379 aa9.45□□□□□ -0.9
COPS7A-207ENST00000538375 SFT2D1Q8WV19 159 aa9.45□□□□□ -0.9
COPS7A-207ENST00000538375 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
COPS7A-207ENST00000538375 FAM19A4Q96LR4 140 aa9.45□□□□□ -0.9
COPS7A-207ENST00000538375 SGK494Q96LW2 274 aa9.45□□□□□ -0.9
COPS7A-207ENST00000538375 TRAV10A0A0B4J240 114 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 KLLNB2CW77 178 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 IGLL5B9A064 214 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 K7EQM0 130 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 HTN3P15516 51 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 CRISP2P16562 243 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 DAD1P61803 113 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 ZFP69Q49AA0 526 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 C5orf17Q8NAS9 161 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 C2CD4CQ8TF44 421 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 EPDR1Q9UM22 224 aa9.44□□□□□ -0.9
COPS7A-207ENST00000538375 PLECQ15149 4684 aaKnown RBP9.44□□□□□ -0.9
COPS7A-207ENST00000538375 DEFB131BA0A096LNP1 70 aa9.43□□□□□ -0.9
COPS7A-207ENST00000538375 TRAV8-1A0A0A6YYK1 113 aa9.43□□□□□ -0.9
COPS7A-207ENST00000538375 TEX48A0A1B0GUV7 120 aa9.43□□□□□ -0.9
COPS7A-207ENST00000538375 A0A1W2PRE2 83 aa9.43□□□□□ -0.9
COPS7A-207ENST00000538375 CBY3A6NI87 242 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms