RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CRYGCP07315 174 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 FAM3BP58499 235 aaPredicted RBP5.47□□□□□ -1.53
MSH6-209ENST00000538136 SMUG1Q53HV7 270 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 PHLDA1Q8WV24 401 aaPredicted RBP5.47□□□□□ -1.53
MSH6-209ENST00000538136 SHANK2-AS3Q9BTD1 123 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 CTDSP1Q9GZU7 261 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 RNASE7Q9H1E1 156 aaKnown RBP5.47□□□□□ -1.53
MSH6-209ENST00000538136 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.46□□□□□ -1.53
MSH6-209ENST00000538136 CRYGBP07316 175 aa5.46□□□□□ -1.53
MSH6-209ENST00000538136 FAM90A2PQ658T7 463 aa5.46□□□□□ -1.53
MSH6-209ENST00000538136 OR8A1Q8NGG7 326 aa5.46□□□□□ -1.53
MSH6-209ENST00000538136 TMEM189A5PLL7 270 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 PSG9Q00887 426 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 CENPWQ5EE01 88 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 C9orf139Q6ZV77 190 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 TCTE3Q8IZS6 198 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 ZNF747Q9BV97 191 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 PSG8Q9UQ74 426 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 NDUFA7O95182 113 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 KIAA1644Q3SXP7 199 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 DGAT2L7PQ6IED9 249 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 TEX261Q6UWH6 196 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 C8orf49Q96NF6 230 aa5.46□□□□□ -1.54
MSH6-209ENST00000538136 SPAG8Q99932 426 aaPredicted RBP5.46□□□□□ -1.54
MSH6-209ENST00000538136 TMEM89A2RUT3 159 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 B4DEV8 164 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 GNRH2O43555 120 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 S100A1P23297 94 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 S100PP25815 95 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 RPL35P42766 123 aaKnown RBP5.45□□□□□ -1.54
MSH6-209ENST00000538136 YPEL3P61236 119 aaPredicted RBP5.45□□□□□ -1.54
MSH6-209ENST00000538136 MEF2BQ02080 365 aaPredicted RBP5.45□□□□□ -1.54
MSH6-209ENST00000538136 RNF24Q9Y225 148 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 LOC102723971A0A1B0GUV8 181 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 HMSDA8MTL9 139 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 PEX7O00628 323 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 FSHBP01225 129 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 IGLV1-40P01703 118 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 GPHB5Q86YW7 130 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 TRRAPQ9Y4A5 3859 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 TENM2Q9NT68 2774 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 IGHV3-38A0A0C4DH36 116 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 APOC4P55056 127 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 Q6ZQT7 251 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 GPR61Q9BZJ8 451 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 MAP6D1Q9H9H5 199 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 TMEM160Q9NX00 188 aa5.45□□□□□ -1.54
MSH6-209ENST00000538136 YTHDF2Q9Y5A9 579 aaKnown RBP5.45□□□□□ -1.54
MSH6-209ENST00000538136 LY6G6CO95867 125 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 SEC11BP0C7V7 166 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 RPS10P46783 165 aaKnown RBP5.44□□□□□ -1.54
MSH6-209ENST00000538136 KLF5Q13887 457 aaPredicted RBP5.44□□□□□ -1.54
MSH6-209ENST00000538136 IGF2BP2-AS1Q96M15 143 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 MEOX2P50222 304 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 ZNF876PQ49A33 203 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 Q9HAA7 133 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 ZNF331Q9NQX6 463 aaPredicted RBP5.44□□□□□ -1.54
MSH6-209ENST00000538136 INSP01308 110 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 PDZD11Q5EBL8 140 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 AGPAT4-IT1Q9H0P7 198 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 EPDR1Q9UM22 224 aa5.44□□□□□ -1.54
MSH6-209ENST00000538136 DMBT1Q9UGM3 2413 aaPredicted RBP5.44□□□□□ -1.54
MSH6-209ENST00000538136 DUSP14O95147 198 aaKnown RBP5.43□□□□□ -1.54
MSH6-209ENST00000538136 BCL2P10415 239 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 NTF3P20783 257 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 FOXA3P55318 350 aaPredicted RBP5.43□□□□□ -1.54
MSH6-209ENST00000538136 SLC50A1Q9BRV3 221 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 GGACTQ9BVM4 153 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 VAX2Q9UIW0 290 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 IGKV1D-37A0A075B6S9 117 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 IGKV3D-20A0A0C4DH25 116 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 ATP5IP56385 69 aaPredicted RBP5.43□□□□□ -1.54
MSH6-209ENST00000538136 NANOS2P60321 138 aaKnown RBP5.43□□□□□ -1.54
MSH6-209ENST00000538136 FABP9Q0Z7S8 132 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 EIF4EBP1Q13541 118 aaPredicted RBP5.43□□□□□ -1.54
MSH6-209ENST00000538136 TMEM241Q24JQ0 296 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 CLPSL2Q6UWE3 100 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 TXN2Q99757 166 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 XKRY2A2RUG3 117 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 H3BUA1 57 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 AKR1D1P51857 326 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 ZNF138P52744 262 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 SRSF3P84103 164 aaKnown RBP5.43□□□□□ -1.54
MSH6-209ENST00000538136 GFI1BQ5VTD9 330 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 RNASEKQ6P5S7 137 aaKnown RBP5.43□□□□□ -1.54
MSH6-209ENST00000538136 OR4C5Q8NGB2 326 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 CITED1Q99966 193 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 PARLQ9H300 379 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 A0A0J9YWU9 116 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 CDKN1BP46527 198 aa5.43□□□□□ -1.54
MSH6-209ENST00000538136 GAGE12JA6NER3 117 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 FABP4P15090 132 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 GAGE1Q13065 139 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 GAGE4Q13068 117 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 GAGE5Q13069 117 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 GAGE13Q4V321 117 aa5.42□□□□□ -1.54
MSH6-209ENST00000538136 C14orf178Q8N769 122 aaPredicted RBP5.42□□□□□ -1.54
MSH6-209ENST00000538136 SRSF8Q9BRL6 282 aaKnown RBP5.42□□□□□ -1.54
MSH6-209ENST00000538136 MRPL32Q9BYC8 188 aaKnown RBP5.42□□□□□ -1.54
MSH6-209ENST00000538136 TRBV19A0A075B6N1 114 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms