RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, human

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD1-215	ENST00000537824	NOTCH1	P46531	2555 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	TCTEX1D4	Q5JR98	221 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824		V9GYV3	84 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	YPEL3	P61236	119 aa	Predicted RBP	4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	FAM57A	Q8TBR7	257 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824		U3KQE9	123 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	CECR9	P0C854	216 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	PDLIM4	P50479	330 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	MORN2	Q502X0	79 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	LINC00114	Q6XXX2	140 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	SPX	Q9BT56	116 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	DPH3P1	Q9H4G8	78 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	TM4SF4	P48230	202 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824		Q6ZRM9	215 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	DKK2	Q9UBU2	259 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	NUPR1	O60356	82 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	CTHRC1	Q96CG8	243 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	SLC50A1	Q9BRV3	221 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	CHCHD5	Q9BSY4	110 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	ZNF581	Q9P0T4	197 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	HTN3	P15516	51 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	NBL1	P41271	181 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	LGALS9B	Q3B8N2	356 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	LGALS9C	Q6DKI2	356 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	IGKV1-12	A0A0C4DH73	117 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	IGKV1D-12	P01611	117 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	PRIMA1	Q86XR5	153 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	SLC22A18AS	Q8N1D0	253 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	ANAPC10	Q9UM13	185 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	SMIM27	A0A1W2PRY6	76 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	SIVA1	O15304	175 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	BAALC-AS2	P0C853	105 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	KLF5	Q13887	457 aa	Predicted RBP	4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	FOXI2	Q6ZQN5	318 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	TAL2	Q16559	108 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	C10orf55	Q5SWW7	151 aa		4.62	□□□□□ -1.67
CSMD1-215	ENST00000537824	CLPSL1	A2RUU4	121 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	MT-ATP8	P03928	68 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	RNF144B	Q7Z419	303 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	STPG1	Q5TH74	334 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	WBP1	Q96G27	269 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	OVOL1	O14753	267 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	IGHG2	P01859	326 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	CR1L	Q2VPA4	569 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	FAM166A	Q6J272	317 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	GFRA4	Q9GZZ7	299 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	TMEM133	Q9H2Q1	129 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	BAHCC1	Q9P281	2608 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	IGHV3-11	P01762	117 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	HAMP	P81172	84 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824		Q6ZUT4	128 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824		Q8N8P6	123 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	KNCN	A6PVL3	124 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	SRRM4	A7MD48	611 aa	Known RBP	4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	TGFBR3L	H3BV60	316 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	ZNF876P	Q49A33	203 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	BRK1	Q8WUW1	75 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	TRGV11	A0A075B6L2	103 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	NPY	P01303	97 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	TMEM167A	Q8TBQ9	72 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	IGHG3	P01860	377 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	FOXG1	P55316	489 aa	Predicted RBP	4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	C8orf49	Q96NF6	230 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824		V9GYY9	64 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	C5orf63	A6NC05	138 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	TFF2	Q03403	129 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	FAM104B	Q5XKR9	115 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824		F8VRH5	84 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824		K7EMI3	77 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	NBR2	O15453	112 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824	ZNF576	Q9H609	170 aa		4.61	□□□□□ -1.67
CSMD1-215	ENST00000537824		A0A1W2PPI3	338 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	PSG7	Q13046	419 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	EGR2	P11161	476 aa	Predicted RBP	4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	TRGV2	A0A075B6R0	118 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	TP53TG1	Q9Y2A0	90 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	LY6G5B	Q8NDX9	201 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	HAX1	O00165	279 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	HOXD3	P31249	432 aa	Predicted RBP	4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	SPACA3	Q8IXA5	215 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	PKIG	Q9Y2B9	76 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	ZNF493	Q6ZR52	646 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	DPM3	Q9P2X0	92 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	PRSS46	E5RG02	174 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824		F8WEM9	126 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	MYOD1	P15172	320 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	NDUFA12	Q9UI09	145 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	SCRT2	Q9NQ03	307 aa		4.6	□□□□□ -1.67
CSMD1-215	ENST00000537824	TRGV4	A0A0C4DH28	118 aa		4.59	□□□□□ -1.67
CSMD1-215	ENST00000537824	SPAAR	A0A1B0GVQ0	90 aa		4.59	□□□□□ -1.67
CSMD1-215	ENST00000537824	C21orf140	B9A014	251 aa		4.59	□□□□□ -1.67
CSMD1-215	ENST00000537824		M0R1W7	72 aa		4.59	□□□□□ -1.67
CSMD1-215	ENST00000537824	SIGLEC15	Q6ZMC9	328 aa		4.59	□□□□□ -1.67
CSMD1-215	ENST00000537824	LYPD6B	Q8NI32	183 aa		4.59	□□□□□ -1.67
CSMD1-215	ENST00000537824	DSCR8	Q96T75	97 aa		4.59	□□□□□ -1.67
CSMD1-215	ENST00000537824		J3QQQ9	107 aa		4.59	□□□□□ -1.67

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