RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 TRAV12-3A0A0B4J271 114 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 TRBV7-9A0A0J9YWB2 115 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 ZNF324O75467 553 aaPredicted RBP12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 P0DMU3 169 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 HTN1P15515 57 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 UBE2L3P68036 154 aaKnown RBP12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 FAM122CQ6P4D5 195 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 OR2G3Q8NGZ4 309 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 LINC00467Q9BRT7 94 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 PSMG3Q9BT73 122 aaPredicted RBP12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 DNAH10Q8IVF4 4471 aa12.15□□□□□ -0.46
SFSWAP-205ENST00000537164 IGKV2-40A0A087WW87 121 aaPredicted RBP12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 C7orf71A4D174 169 aa12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 CBY3A6NI87 242 aa12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 IGKV2D-40P01614 121 aaPredicted RBP12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 TMEM78Q5T7P6 136 aa12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 PQLC2Q6ZP29 291 aa12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 CCDC28AQ8IWP9 274 aa12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 LINC00612Q8N6U2 182 aa12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 VGLL1Q99990 258 aa12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 Q9H3A6 140 aa12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 ZNF492Q9P255 531 aa12.14□□□□□ -0.47
SFSWAP-205ENST00000537164 DEFB130BP0DP73 79 aa12.13□□□□□ -0.47
SFSWAP-205ENST00000537164 DEFB130AP0DP74 79 aa12.13□□□□□ -0.47
SFSWAP-205ENST00000537164 RANP62826 216 aaKnown RBP12.13□□□□□ -0.47
SFSWAP-205ENST00000537164 ZFAND2AQ8N6M9 145 aa12.13□□□□□ -0.47
SFSWAP-205ENST00000537164 ARL6IP6Q8N6S5 226 aa12.13□□□□□ -0.47
SFSWAP-205ENST00000537164 A0A1W2PPV4 95 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 RNF222A6NCQ9 220 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 J3KRW8 73 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 ATP5G1P05496 136 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 HTN3P15516 51 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 ATP5G3P48201 142 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 RAB2AP61019 212 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 SERF2P84101 59 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 CD300CQ08708 224 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 TMEM88Q6PEY1 159 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 POM121L12Q8N7R1 296 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 OR10G4Q8NGN3 311 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 OR10G9Q8NGN4 311 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 OR10G7Q8NGN6 311 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 TNFSF18Q9UNG2 199 aa12.12□□□□□ -0.47
SFSWAP-205ENST00000537164 G3V3Q6 166 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 ATP6V0CP27449 155 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 CSN1S1P47710 185 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 ZNF138P52744 262 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 DAZ2Q13117 558 aaKnown RBP12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 BTN1A1Q13410 526 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 ANXA2RQ3ZCQ2 193 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 HSD17B11Q8NBQ5 300 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 INO80EQ8NBZ0 244 aaPredicted RBP12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 OR2T35Q8NGX2 323 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 RXFP4Q8TDU9 374 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 LENEPQ9Y5L5 61 aa12.11□□□□□ -0.47
SFSWAP-205ENST00000537164 DIRC3C9JPN6 131 aa12.1□□□□□ -0.47
SFSWAP-205ENST00000537164 GPX1P07203 203 aa12.1□□□□□ -0.47
SFSWAP-205ENST00000537164 SUN5Q8TC36 379 aa12.1□□□□□ -0.47
SFSWAP-205ENST00000537164 TMED6Q8WW62 240 aa12.1□□□□□ -0.47
SFSWAP-205ENST00000537164 OTORQ9NRC9 128 aa12.1□□□□□ -0.47
SFSWAP-205ENST00000537164 BIRC6Q9NR09 4857 aa12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 SNURFLB1AK76 121 aa12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 EIF3GO75821 320 aaKnown RBP eCLIP12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 MBP02144 154 aa12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 STAG3L2P0CL84 134 aa12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 STAG3L3P0CL85 134 aa12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 RNASE4P34096 147 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 RNF212Q495C1 297 aa12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 PRR9Q5T870 116 aa12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 EIF4E3Q8N5X7 224 aaKnown RBP12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 ZNF680Q8NEM1 530 aa12.09□□□□□ -0.47
SFSWAP-205ENST00000537164 NACAE9PAV3 2078 aa12.08□□□□□ -0.48
SFSWAP-205ENST00000537164 CDC34P49427 236 aaPredicted RBP12.08□□□□□ -0.48
SFSWAP-205ENST00000537164 FAM74A1Q5RGS3 127 aa12.08□□□□□ -0.48
SFSWAP-205ENST00000537164 C18orf15Q96N68 181 aa12.08□□□□□ -0.48
SFSWAP-205ENST00000537164 FXYD6-FXYD2A0A087WZ82 144 aa12.07□□□□□ -0.48
SFSWAP-205ENST00000537164 PGPA6NDG6 321 aa12.07□□□□□ -0.48
SFSWAP-205ENST00000537164 ARL14EPLP0DKL9 152 aa12.07□□□□□ -0.48
SFSWAP-205ENST00000537164 IBA57Q5T440 356 aaKnown RBP12.07□□□□□ -0.48
SFSWAP-205ENST00000537164 Q8TAT8 98 aa12.07□□□□□ -0.48
SFSWAP-205ENST00000537164 RAB24Q969Q5 203 aa12.07□□□□□ -0.48
SFSWAP-205ENST00000537164 GNPNAT1Q96EK6 184 aaPredicted RBP12.07□□□□□ -0.48
SFSWAP-205ENST00000537164 DNAH2Q9P225 4427 aa12.07□□□□□ -0.48
SFSWAP-205ENST00000537164 HECTD4Q9Y4D8 3996 aa12.06□□□□□ -0.48
SFSWAP-205ENST00000537164 F5H768 121 aa12.06□□□□□ -0.48
SFSWAP-205ENST00000537164 Q6AWC8 147 aa12.06□□□□□ -0.48
SFSWAP-205ENST00000537164 RPL7L1Q6DKI1 246 aaKnown RBP12.06□□□□□ -0.48
SFSWAP-205ENST00000537164 SH3BGRL3Q9H299 93 aa12.06□□□□□ -0.48
SFSWAP-205ENST00000537164 BORCS7-ASMTA0A0B4J1R7 106 aa12.05□□□□□ -0.48
SFSWAP-205ENST00000537164 HMGB3O15347 200 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-205ENST00000537164 TCL1AP56279 114 aa12.05□□□□□ -0.48
SFSWAP-205ENST00000537164 Q6ZQT7 251 aa12.05□□□□□ -0.48
SFSWAP-205ENST00000537164 CMTM2Q8TAZ6 248 aa12.05□□□□□ -0.48
SFSWAP-205ENST00000537164 ST6GAL2Q96JF0 529 aa12.05□□□□□ -0.48
SFSWAP-205ENST00000537164 HYLS1Q96M11 299 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms