RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 C11orf72Q8NBR9 251 aa3.55□□□□□ -1.84
USH1C-210ENST00000534556 OR11H4Q8NGC9 324 aa3.55□□□□□ -1.84
USH1C-210ENST00000534556 LINC01587Q99440 93 aa3.55□□□□□ -1.84
USH1C-210ENST00000534556 TMEM208Q9BTX3 173 aa3.55□□□□□ -1.84
USH1C-210ENST00000534556 PAXXQ9BUH6 204 aa3.55□□□□□ -1.84
USH1C-210ENST00000534556 MRPL32Q9BYC8 188 aaKnown RBP3.55□□□□□ -1.84
USH1C-210ENST00000534556 CYTL1Q9NRR1 136 aa3.55□□□□□ -1.84
USH1C-210ENST00000534556 TNFSF18Q9UNG2 199 aa3.55□□□□□ -1.84
USH1C-210ENST00000534556 TRAV8-1A0A0A6YYK1 113 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 C7orf71A4D174 169 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 TMEM189A5PLL7 270 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 OR7C2O60412 319 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 GIPP09681 153 aaPredicted RBP3.54□□□□□ -1.84
USH1C-210ENST00000534556 DEFB130BP0DP73 79 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 DEFB130AP0DP74 79 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 HTN1P15515 57 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 M6PRP20645 277 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 S100A7P31151 101 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 RNASE4P34096 147 aaKnown RBP3.54□□□□□ -1.84
USH1C-210ENST00000534556 TAS2R60P59551 318 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 GNG5P63218 68 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 PDE6HQ13956 83 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 Q6ZTI0 123 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 HSD17B11Q8NBQ5 300 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 OR10J6PQ8NGY7 276 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 SUN5Q8TC36 379 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 MRPL53Q96EL3 112 aaKnown RBP3.54□□□□□ -1.84
USH1C-210ENST00000534556 ODF3Q96PU9 254 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 Q9H3A6 140 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 NOP10Q9NPE3 64 aaKnown RBP3.54□□□□□ -1.84
USH1C-210ENST00000534556 ZNF492Q9P255 531 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 C11orf21Q9P2W6 132 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 PRELID1Q9Y255 219 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 KLF12Q9Y4X4 402 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 TIMM9Q9Y5J7 89 aa3.54□□□□□ -1.84
USH1C-210ENST00000534556 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
USH1C-210ENST00000534556 ABCA13Q86UQ4 5058 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 GAGE12BA1L429 117 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 PGPA6NDG6 321 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 LYRM9A8MSI8 78 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 DIRC3C9JPN6 131 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 H7BYZ3 331 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 M0R2N4 97 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 RTL8CO15255 209 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 GAGE7O76087 117 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 IFNA5P01569 189 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 IGLV2-11P01706 119 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 SLC25A5P05141 298 aaKnown RBP3.53□□□□□ -1.84
USH1C-210ENST00000534556 GAGE12FP0CL80 117 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 GAGE12GP0CL81 117 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 GAGE12IP0CL82 117 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 STAG3L2P0CL84 134 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 STAG3L3P0CL85 134 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 PET100P0DJ07 73 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 ARL14EPLP0DKL9 152 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 ZNF80P51504 273 aaPredicted RBP3.53□□□□□ -1.84
USH1C-210ENST00000534556 TCTAP57738 103 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 DAD1P61803 113 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 UBE2L3P68036 154 aaKnown RBP3.53□□□□□ -1.84
USH1C-210ENST00000534556 RGS21Q2M5E4 152 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 Q6ZR54 194 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 S100A7AQ86SG5 101 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 ZNF575Q86XF7 245 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 TMEM256Q8N2U0 113 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 OR10G4Q8NGN3 311 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 OR10G9Q8NGN4 311 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 OR10G7Q8NGN6 311 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 OR2T35Q8NGX2 323 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 OR2G3Q8NGZ4 309 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 SCGB1C1Q8TD33 95 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 TMEM263Q8WUH6 116 aaKnown RBP3.53□□□□□ -1.84
USH1C-210ENST00000534556 RAB24Q969Q5 203 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 SGK494Q96LW2 274 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 LINC00477Q96M19 166 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 C20orf144Q9BQM9 153 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 TMPRSS5Q9H3S3 457 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 GSN-AS1Q9NRJ2 163 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 PPP1R14DQ9NXH3 145 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 HSPG2P98160 4391 aa3.53□□□□□ -1.84
USH1C-210ENST00000534556 IGLV2-18A0A075B6J9 118 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 FXYD6-FXYD2A0A087WZ82 144 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 CBY3A6NI87 242 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 GGTLC3B5MD39 225 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 C17orf112F2Z3M2 114 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 GCHFRP30047 84 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 LEPP41159 167 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 ZNF138P52744 262 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 ACOT6Q3I5F7 207 aaPredicted RBP3.52□□□□□ -1.85
USH1C-210ENST00000534556 KHDC3LQ587J8 217 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 MUC21Q5SSG8 566 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 ZNF493Q6ZR52 646 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 POM121L12Q8N7R1 296 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 C16orf74Q96GX8 76 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 VSIG2Q96IQ7 327 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 HYLS1Q96M11 299 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 LINC00479Q96M42 142 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 C8orf49Q96NF6 230 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 PYGO2Q9BRQ0 406 aa3.52□□□□□ -1.85
USH1C-210ENST00000534556 LINC00467Q9BRT7 94 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms