RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 PXMP4Q9Y6I8 212 aa10.93□□□□□ -0.66
RPS3-220ENST00000534555 HIST1H1AQ02539 215 aaPredicted RBP10.92□□□□□ -0.66
RPS3-220ENST00000534555 ZNF738Q8NE65 137 aa10.92□□□□□ -0.66
RPS3-220ENST00000534555 WDR61Q9GZS3 305 aaKnown RBP10.92□□□□□ -0.66
RPS3-220ENST00000534555 MRPS16Q9Y3D3 137 aaKnown RBP10.92□□□□□ -0.66
RPS3-220ENST00000534555 A0A087X0K7 114 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 C17orf112F2Z3M2 114 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 IFNA5P01569 189 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 M6PRP20645 277 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 BPIFA4PQ86YQ2 179 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 TMEM256Q8N2U0 113 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 RNASE8Q8TDE3 154 aaKnown RBP10.91□□□□□ -0.66
RPS3-220ENST00000534555 FRZBQ92765 325 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 PGPEP1Q9NXJ5 209 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 VPS13BQ7Z7G8 4022 aa10.91□□□□□ -0.66
RPS3-220ENST00000534555 MYCBP2O75592 4640 aa10.9□□□□□ -0.66
RPS3-220ENST00000534555 SMR3BP02814 79 aaPredicted RBP10.9□□□□□ -0.66
RPS3-220ENST00000534555 OR8A1Q8NGG7 326 aa10.9□□□□□ -0.66
RPS3-220ENST00000534555 OR10J6PQ8NGY7 276 aa10.9□□□□□ -0.66
RPS3-220ENST00000534555 LRRC20Q8TCA0 184 aa10.9□□□□□ -0.66
RPS3-220ENST00000534555 SCGB1C1Q8TD33 95 aa10.9□□□□□ -0.66
RPS3-220ENST00000534555 ZNF503Q96F45 646 aa10.9□□□□□ -0.66
RPS3-220ENST00000534555 SMIM3Q9BZL3 60 aa10.9□□□□□ -0.66
RPS3-220ENST00000534555 PPP1R14DQ9NXH3 145 aa10.9□□□□□ -0.66
RPS3-220ENST00000534555 GAGE12BA1L429 117 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 GAGE7O76087 117 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 GAGE12FP0CL80 117 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 GAGE12GP0CL81 117 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 GAGE12IP0CL82 117 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 CXCL2P19875 107 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 KRTAP10-1P60331 282 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 KIR3DS1Q14943 382 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 LINC00612Q8N6U2 182 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
RPS3-220ENST00000534555 TNFRSF18Q9Y5U5 241 aa10.89□□□□□ -0.67
RPS3-220ENST00000534555 MRPS12O15235 138 aaKnown RBP10.88□□□□□ -0.67
RPS3-220ENST00000534555 MORN5Q5VZ52 161 aa10.88□□□□□ -0.67
RPS3-220ENST00000534555 LCN15Q6UWW0 184 aa10.88□□□□□ -0.67
RPS3-220ENST00000534555 ZNF493Q6ZR52 646 aa10.88□□□□□ -0.67
RPS3-220ENST00000534555 AQP10Q96PS8 301 aa10.88□□□□□ -0.67
RPS3-220ENST00000534555 PARD6GQ9BYG4 376 aaPredicted RBP10.88□□□□□ -0.67
RPS3-220ENST00000534555 TRAV5A0A0B4J249 113 aa10.87□□□□□ -0.67
RPS3-220ENST00000534555 CDKN1BP46527 198 aa10.87□□□□□ -0.67
RPS3-220ENST00000534555 GUK1Q16774 197 aa10.87□□□□□ -0.67
RPS3-220ENST00000534555 INO80EQ8NBZ0 244 aaPredicted RBP10.87□□□□□ -0.67
RPS3-220ENST00000534555 OR2T35Q8NGX2 323 aa10.87□□□□□ -0.67
RPS3-220ENST00000534555 SLC50A1Q9BRV3 221 aa10.87□□□□□ -0.67
RPS3-220ENST00000534555 FLG2Q5D862 2391 aaPredicted RBP10.87□□□□□ -0.67
RPS3-220ENST00000534555 A0A096LPF7 62 aa10.86□□□□□ -0.67
RPS3-220ENST00000534555 DNAH10OSP0CZ25 163 aa10.86□□□□□ -0.67
RPS3-220ENST00000534555 ZNF266Q14584 549 aa10.86□□□□□ -0.67
RPS3-220ENST00000534555 PSG3Q16557 428 aa10.86□□□□□ -0.67
RPS3-220ENST00000534555 Q5BKY6 102 aa10.86□□□□□ -0.67
RPS3-220ENST00000534555 GCSAMLQ5JQS6 135 aa10.86□□□□□ -0.67
RPS3-220ENST00000534555 C18orf15Q96N68 181 aa10.86□□□□□ -0.67
RPS3-220ENST00000534555 WFDC1Q9HC57 220 aa10.86□□□□□ -0.67
RPS3-220ENST00000534555 FXYD6-FXYD2A0A087WZ82 144 aa10.85□□□□□ -0.67
RPS3-220ENST00000534555 H3BNG1 76 aa10.85□□□□□ -0.67
RPS3-220ENST00000534555 H7BYZ3 331 aa10.85□□□□□ -0.67
RPS3-220ENST00000534555 EREGO14944 169 aa10.85□□□□□ -0.67
RPS3-220ENST00000534555 IGLC2P0DOY2 106 aa10.85□□□□□ -0.67
RPS3-220ENST00000534555 HAMPP81172 84 aa10.85□□□□□ -0.67
RPS3-220ENST00000534555 VSIG2Q96IQ7 327 aa10.85□□□□□ -0.67
RPS3-220ENST00000534555 MRPL32Q9BYC8 188 aaKnown RBP10.85□□□□□ -0.67
RPS3-220ENST00000534555 TMPRSS5Q9H3S3 457 aa10.85□□□□□ -0.67
RPS3-220ENST00000534555 TMEM14CQ9P0S9 112 aa10.85□□□□□ -0.67
RPS3-220ENST00000534555 SNRPCP09234 159 aaKnown RBP10.84□□□□□ -0.67
RPS3-220ENST00000534555 ERVFC1-1P60608 527 aa10.84□□□□□ -0.67
RPS3-220ENST00000534555 FFAR4Q5NUL3 377 aa10.84□□□□□ -0.67
RPS3-220ENST00000534555 CDPF1Q6NVV7 123 aa10.84□□□□□ -0.67
RPS3-220ENST00000534555 RPUSD4Q96CM3 377 aaKnown RBP10.84□□□□□ -0.67
RPS3-220ENST00000534555 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
RPS3-220ENST00000534555 H3BQ15 152 aa10.83□□□□□ -0.68
RPS3-220ENST00000534555 H3BTX0 84 aa10.83□□□□□ -0.68
RPS3-220ENST00000534555 SIVA1O15304 175 aa10.83□□□□□ -0.68
RPS3-220ENST00000534555 ICAM4Q14773 271 aa10.83□□□□□ -0.68
RPS3-220ENST00000534555 CCDC28AQ8IWP9 274 aa10.83□□□□□ -0.68
RPS3-220ENST00000534555 TNFSF18Q9UNG2 199 aa10.83□□□□□ -0.68
RPS3-220ENST00000534555 FUT9Q9Y231 359 aa10.83□□□□□ -0.68
RPS3-220ENST00000534555 TIMM9Q9Y5J7 89 aa10.83□□□□□ -0.68
RPS3-220ENST00000534555 TRBV19A0A075B6N1 114 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 A0A087WTM6 91 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 SNURFLB1AK76 121 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 J3KRW8 73 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 ZNF253O75346 499 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
RPS3-220ENST00000534555 GFI1BQ5VTD9 330 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 Q6ZTI0 123 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 MIR17HGQ75NE6 70 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 SAT2Q96F10 170 aaPredicted RBP10.82□□□□□ -0.68
RPS3-220ENST00000534555 C20orf144Q9BQM9 153 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 SLC25A2Q9BXI2 301 aa10.82□□□□□ -0.68
RPS3-220ENST00000534555 RNF222A6NCQ9 220 aa10.81□□□□□ -0.68
RPS3-220ENST00000534555 PRAC2D3DTV9 90 aa10.81□□□□□ -0.68
RPS3-220ENST00000534555 SLC17A3O00476 420 aa10.81□□□□□ -0.68
RPS3-220ENST00000534555 PDE6HQ13956 83 aa10.81□□□□□ -0.68
RPS3-220ENST00000534555 ACOT6Q3I5F7 207 aaPredicted RBP10.81□□□□□ -0.68
RPS3-220ENST00000534555 BORCS7-ASMTA0A0B4J1R7 106 aa10.8□□□□□ -0.68
RPS3-220ENST00000534555 NXPH4O95158 308 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms