RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 SPTBN2O15020 2390 aa15.1■□□□□ 0.01
SMPD1-210ENST00000534405 RHODO00212 210 aa15.09■□□□□ 0.01
SMPD1-210ENST00000534405 WT1-ASQ06250 92 aa15.09■□□□□ 0.01
SMPD1-210ENST00000534405 TCF15Q12870 199 aa15.09■□□□□ 0.01
SMPD1-210ENST00000534405 Q86TA4 180 aa15.09■□□□□ 0.01
SMPD1-210ENST00000534405 DLX4Q92988 240 aaPredicted RBP15.09■□□□□ 0.01
SMPD1-210ENST00000534405 CTSZQ9UBR2 303 aa15.09■□□□□ 0.01
SMPD1-210ENST00000534405 A0A087WX48 190 aa15.09■□□□□ 0.01
SMPD1-210ENST00000534405 FABP5P3A8MUU1 101 aa15.09■□□□□ 0.01
SMPD1-210ENST00000534405 IGHV3-48P01763 117 aa15.09■□□□□ 0.01
SMPD1-210ENST00000534405 TMEM158Q8WZ71 300 aa15.09■□□□□ 0.01
SMPD1-210ENST00000534405 FLYWCH2Q96CP2 140 aaKnown RBP15.09■□□□□ 0.01
SMPD1-210ENST00000534405 CIARTQ8N365 385 aaPredicted RBP15.08■□□□□ 0.01
SMPD1-210ENST00000534405 KALRNO60229 2985 aa15.08■□□□□ 0
SMPD1-210ENST00000534405 IGKCP01834 107 aa15.08■□□□□ 0
SMPD1-210ENST00000534405 MORN3Q6PF18 240 aaPredicted RBP15.08■□□□□ 0
SMPD1-210ENST00000534405 ORMDL3Q8N138 153 aa15.08■□□□□ 0
SMPD1-210ENST00000534405 CCDC179H3BU77 68 aa15.07■□□□□ 0
SMPD1-210ENST00000534405 LINC00305Q7Z4B0 112 aa15.07■□□□□ 0
SMPD1-210ENST00000534405 TEN1Q86WV5 123 aa15.07■□□□□ 0
SMPD1-210ENST00000534405 SRSF12Q8WXF0 261 aaKnown RBP15.07■□□□□ 0
SMPD1-210ENST00000534405 IGLV2-23P01705 113 aa15.07■□□□□ 0
SMPD1-210ENST00000534405 NDUFV3P56181 108 aaKnown RBP15.07■□□□□ 0
SMPD1-210ENST00000534405 TMEM167AQ8TBQ9 72 aa15.07■□□□□ 0
SMPD1-210ENST00000534405 TPSG1Q9NRR2 321 aa15.07■□□□□ 0
SMPD1-210ENST00000534405 MRPL36Q9P0J6 103 aaKnown RBP15.07■□□□□ 0
SMPD1-210ENST00000534405 TMEM262E9PQX1 116 aa15.06■□□□□ 0
SMPD1-210ENST00000534405 ZNF688P0C7X2 276 aa15.06■□□□□ 0
SMPD1-210ENST00000534405 ERHP84090 104 aaKnown RBP15.06■□□□□ 0
SMPD1-210ENST00000534405 GTSCR1Q86UQ5 136 aa15.06■□□□□ 0
SMPD1-210ENST00000534405 Q8NA96 180 aa15.06■□□□□ 0
SMPD1-210ENST00000534405 APC2O95996 2303 aa15.06■□□□□ 0
SMPD1-210ENST00000534405 TRBV7-3A0A075B6L6 115 aa15.06■□□□□ 0
SMPD1-210ENST00000534405 OR4C13Q8NGP0 309 aa15.06■□□□□ 0
SMPD1-210ENST00000534405 YAE1D1Q9NRH1 226 aa15.06■□□□□ 0
SMPD1-210ENST00000534405 IGHG4P01861 327 aa15.05■□□□□ 0
SMPD1-210ENST00000534405 LOXP28300 417 aaPredicted RBP15.05■□□□□ 0
SMPD1-210ENST00000534405 FAM104BQ5XKR9 115 aa15.05■□□□□ 0
SMPD1-210ENST00000534405 SRSF8Q9BRL6 282 aaKnown RBP15.05■□□□□ 0
SMPD1-210ENST00000534405 SPANXA1Q9NS26 97 aa15.05■□□□□ 0
SMPD1-210ENST00000534405 CENPVL3A0A0U1RRI6 287 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 ZNF785A8K8V0 405 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 INS-IGF2F8WCM5 200 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 LINC01619G3V211 115 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 NDUFB3O43676 98 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 PLAUP00749 431 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 DLX6P56179 175 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 RUSC1-AS1Q66K80 236 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 WFDC3Q8IUB2 231 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 MAPKAPK5-AS1Q8N8E1 139 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 HIST1H4GQ99525 98 aa15.05■□□□□ -0
SMPD1-210ENST00000534405 IGKV1D-37A0A075B6S9 117 aa15.04■□□□□ -0
SMPD1-210ENST00000534405 MRGPRG-AS1Q2M3A8 158 aa15.04■□□□□ -0
SMPD1-210ENST00000534405 ZC2HC1BQ5TFG8 222 aa15.04■□□□□ -0
SMPD1-210ENST00000534405 NPIPB3Q92617 1050 aa15.04■□□□□ -0
SMPD1-210ENST00000534405 Q9H3A6 140 aa15.04■□□□□ -0
SMPD1-210ENST00000534405 RNASE6Q93091 150 aaKnown RBP15.04■□□□□ -0
SMPD1-210ENST00000534405 TRBV6-1A0A0K0K1D8 114 aa15.03■□□□□ -0
SMPD1-210ENST00000534405 TMEM8BA6NDV4 472 aa15.03■□□□□ -0
SMPD1-210ENST00000534405 IGLV2-11P01706 119 aa15.03■□□□□ -0
SMPD1-210ENST00000534405 DLX1P56177 255 aa15.03■□□□□ -0
SMPD1-210ENST00000534405 GFRALQ6UXV0 394 aa15.03■□□□□ -0
SMPD1-210ENST00000534405 LINC00311Q8N616 119 aa15.03■□□□□ -0
SMPD1-210ENST00000534405 IGHV3-72A0A0B4J1Y9 119 aa15.03■□□□□ -0
SMPD1-210ENST00000534405 PRR30Q53SZ7 412 aaPredicted RBP15.03■□□□□ -0
SMPD1-210ENST00000534405 PRSS33Q8NF86 280 aa15.03■□□□□ -0
SMPD1-210ENST00000534405 PTH2Q96A98 100 aa15.03■□□□□ -0
SMPD1-210ENST00000534405 TRAV8-1A0A0A6YYK1 113 aa15.02■□□□□ -0
SMPD1-210ENST00000534405 HOXA3O43365 443 aaPredicted RBP15.02■□□□□ -0
SMPD1-210ENST00000534405 DPM2O94777 84 aa15.02■□□□□ -0
SMPD1-210ENST00000534405 HOXB4P17483 251 aaPredicted RBP15.02■□□□□ -0
SMPD1-210ENST00000534405 LINC01559Q495D7 138 aa15.02■□□□□ -0
SMPD1-210ENST00000534405 AMN1Q8IY45 258 aa15.02■□□□□ -0
SMPD1-210ENST00000534405 POLEQ07864 2286 aa15.02□□□□□ -0.01
SMPD1-210ENST00000534405 A0A1W2PPI3 338 aa15.02□□□□□ -0.01
SMPD1-210ENST00000534405 LINC01546A6NGU7 62 aa15.02□□□□□ -0.01
SMPD1-210ENST00000534405 PRB3Q04118 309 aaPredicted RBP15.02□□□□□ -0.01
SMPD1-210ENST00000534405 MRPL51Q4U2R6 128 aaKnown RBP15.02□□□□□ -0.01
SMPD1-210ENST00000534405 THAP8Q8NA92 274 aa15.02□□□□□ -0.01
SMPD1-210ENST00000534405 E7EQL1 145 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 IL4P05112 153 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 GAGE2BQ13066 116 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 ANXA2RQ3ZCQ2 193 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 GAGE2EQ4V326 116 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 TMEM155Q4W5P6 130 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 PRNTQ86SH4 94 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 SBSPONQ8IVN8 264 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 RPEQ96AT9 228 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 KIR2DL4Q99706 377 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 GAGE2DQ9UEU5 116 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 GP9P14770 177 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 ID1P41134 155 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 Q71RC1 249 aaPredicted RBP15.01□□□□□ -0.01
SMPD1-210ENST00000534405 C8orf31Q8N9H6 132 aa15.01□□□□□ -0.01
SMPD1-210ENST00000534405 PRTN3P24158 256 aa15□□□□□ -0.01
SMPD1-210ENST00000534405 TWIST1Q15672 202 aa15□□□□□ -0.01
SMPD1-210ENST00000534405 IGHV1-8P0DP01 117 aa15□□□□□ -0.01
SMPD1-210ENST00000534405 MAP1LC3AQ9H492 121 aa15□□□□□ -0.01
SMPD1-210ENST00000534405 VPREB3Q9UKI3 123 aa15□□□□□ -0.01
SMPD1-210ENST00000534405 ATP5LO75964 103 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms