RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 PIKFYVEQ9Y2I7 2098 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 DENND4CQ5VZ89 1909 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 PLXNB3Q9ULL4 1909 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 SCN8AQ9UQD0 1980 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 SPTBN2O15020 2390 aa2.54□□□□□ -2
CSMD3-210ENST00000534172 KALRNO60229 2985 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 DEDDO75618 318 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 LGALS1P09382 135 aaKnown RBP2.53□□□□□ -2
CSMD3-210ENST00000534172 ZNF688P0C7X2 276 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 CD70P32970 193 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 PPP1CAP62136 330 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 ZNF90Q03938 601 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 IL15RAQ13261 267 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 EIF3IQ13347 325 aaKnown RBP2.53□□□□□ -2
CSMD3-210ENST00000534172 INSL4Q14641 139 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 ZNF141Q15928 474 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 TMEM61Q8N0U2 210 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 METTL26Q96S19 204 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 SMIM7Q9BQ49 75 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 FAM103A1Q9BTL3 118 aaKnown RBP2.53□□□□□ -2
CSMD3-210ENST00000534172 PBOV1Q9GZY1 135 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 SLC25A22Q9H936 323 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 CHCHD2Q9Y6H1 151 aaPredicted RBP2.53□□□□□ -2
CSMD3-210ENST00000534172 CREBBPQ92793 2442 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 IGLV3-10A0A075B6K4 115 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 GRIFINA4D1Z8 144 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 C5orf67F2Z3F1 127 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 H0Y9J4 135 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 SDCBPO00560 298 aaPredicted RBP2.53□□□□□ -2
CSMD3-210ENST00000534172 OVOL1O14753 267 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 CD3DP04234 171 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 S100A3P33764 101 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 NCBP2P52298 156 aaKnown RBP eCLIP2.53□□□□□ -2
CSMD3-210ENST00000534172 TAS2R45P59539 299 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 RPL23P62829 140 aaKnown RBP2.53□□□□□ -2
CSMD3-210ENST00000534172 PLGLB1Q02325 96 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 ARFRP1Q13795 201 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 ZNF791Q3KP31 576 aaPredicted RBP2.53□□□□□ -2
CSMD3-210ENST00000534172 LINC00612Q8N6U2 182 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 ELSPBP1Q96BH3 223 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 DEFB126Q9BYW3 111 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 PARP12Q9H0J9 701 aaKnown RBP2.53□□□□□ -2
CSMD3-210ENST00000534172 VSIRQ9H7M9 311 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 PRO0461Q9UI25 63 aa2.53□□□□□ -2
CSMD3-210ENST00000534172 MYLKQ15746 1914 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 DSPP15924 2871 aaKnown RBP2.52□□□□□ -2.01
CSMD3-210ENST00000534172 SMIM26A0A096LP01 95 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 A0A0J9YXY3 114 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 C3orf85A0A1B0GTC6 90 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 ZNF708P17019 499 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 HBG1P69891 147 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 HBG2P69892 147 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 CCL20P78556 96 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 RRN3P1Q2M238 152 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 NMSQ5H8A3 153 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 PSMG4Q5JS54 123 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 LYRM7Q5U5X0 104 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 C2orf91Q6ZV80 131 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 SH2D6Q7Z4S9 175 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 C7orf33Q8WU49 177 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 SRSF12Q8WXF0 261 aaKnown RBP2.52□□□□□ -2.01
CSMD3-210ENST00000534172 BMFQ96LC9 184 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 OR2A5Q96R48 311 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 EMC6Q9BV81 110 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 CCL28Q9NRJ3 127 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 ARL2-SNX15V9GYD0 113 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 NINQ8N4C6 2090 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 IGHV3OR16-9A0A0B4J2B5 98 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 FAM236AA0A1B0GUQ0 79 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 FAM236BA0A1B0GV22 79 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 J3QQQ9 107 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 J3QRE1 110 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 GIG44P09565 113 aaPredicted RBP2.52□□□□□ -2.01
CSMD3-210ENST00000534172 CHTF8P0CG12 524 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 CRYGAP11844 174 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 Q56UQ5 140 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 FKBP1CQ5VVH2 108 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 TMEM14EPQ6UXP3 125 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 TEN1Q86WV5 123 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 ZNF584Q8IVC4 421 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 ZCCHC24Q8N2G6 241 aaKnown RBP2.52□□□□□ -2.01
CSMD3-210ENST00000534172 EXOC3-AS1Q8N2X6 119 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 LMX1AQ8TE12 382 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 SPACA5Q96QH8 159 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 TMEM147Q9BVK8 224 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 GNB1LQ9BYB4 327 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 TMEM131Q92545 1883 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 DOPEY2Q9Y3R5 2298 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 CEP295Q9C0D2 2601 aa2.52□□□□□ -2.01
CSMD3-210ENST00000534172 BAZ2BQ9UIF8 2168 aaKnown RBP2.52□□□□□ -2.01
CSMD3-210ENST00000534172 A0A0J9YXV3 536 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 LOC107986453A0A1B0GWG9 222 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 A0A1B0GXF2 115 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 LY6LH3BQJ8 138 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 NDUFS5O43920 106 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 PGLYRP1O75594 196 aaPredicted RBP2.51□□□□□ -2.01
CSMD3-210ENST00000534172 WISP3O95389 354 aaPredicted RBP2.51□□□□□ -2.01
CSMD3-210ENST00000534172 IGKV3-15P01624 115 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 CBLN1P23435 193 aa2.51□□□□□ -2.01
CSMD3-210ENST00000534172 MPV17P39210 176 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 678.6 ms