RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 OR10J3Q5JRS4 329 aa4.13□□□□□ -1.75
CD44-237ENST00000534082 FFAR4Q5NUL3 377 aa4.13□□□□□ -1.75
CD44-237ENST00000534082 LPCAT3Q6P1A2 487 aa4.13□□□□□ -1.75
CD44-237ENST00000534082 PET117Q6UWS5 81 aa4.13□□□□□ -1.75
CD44-237ENST00000534082 NOXA1Q86UR1 476 aa4.13□□□□□ -1.75
CD44-237ENST00000534082 SLC25A38Q96DW6 304 aa4.13□□□□□ -1.75
CD44-237ENST00000534082 SLC35E1Q96K37 410 aa4.13□□□□□ -1.75
CD44-237ENST00000534082 TP53RKQ96S44 253 aa4.13□□□□□ -1.75
CD44-237ENST00000534082 ANAPC10Q9UM13 185 aa4.13□□□□□ -1.75
CD44-237ENST00000534082 A0A0A6YYH2 397 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 TRAV8-3A0A0A6YYJ7 113 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 LOC100131303A0A0U1RQF7 123 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 A6NJ64 397 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 MBP02144 154 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 APOA1P02647 267 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 SFTA3P0C7M3 94 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 ORM2P19652 201 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 LEPP41159 167 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 KRTAP10-8P60410 259 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 PXDC1Q5TGL8 231 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 C22orf42Q6IC83 251 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 STEAP1BQ6NZ63 245 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 DHRSXQ8N5I4 330 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 EIF4E3Q8N5X7 224 aaKnown RBP4.12□□□□□ -1.75
CD44-237ENST00000534082 NHLRC2Q8NBF2 726 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 LRRC20Q8TCA0 184 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 ZNF479Q96JC4 524 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 TRGV9Q99603 122 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 MGLLQ99685 303 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 TMEM147Q9BVK8 224 aa4.12□□□□□ -1.75
CD44-237ENST00000534082 IGKV1OR2-108A0A075B7D4 117 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 A0A087X0K7 114 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 TRAV34A0A0B4J273 112 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 H3BRN7 92 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 PANO1I0J062 215 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 CFDP00746 253 aaPredicted RBP4.11□□□□□ -1.75
CD44-237ENST00000534082 RPL7P18124 248 aaKnown RBP4.11□□□□□ -1.75
CD44-237ENST00000534082 FHITP49789 147 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 PTTG1IPP53801 180 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 UCP3P55916 312 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 RND3P61587 244 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 ANXA2RQ3ZCQ2 193 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 IBA57Q5T440 356 aaKnown RBP4.11□□□□□ -1.75
CD44-237ENST00000534082 SH2D6Q7Z4S9 175 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 FAM219AQ8IW50 185 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 OR5H6Q8NGV6 325 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 ZNF431Q8TF32 576 aaPredicted RBP4.11□□□□□ -1.75
CD44-237ENST00000534082 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.11□□□□□ -1.75
CD44-237ENST00000534082 COX11Q9Y6N1 276 aa4.11□□□□□ -1.75
CD44-237ENST00000534082 C3orf85A0A1B0GTC6 90 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 SMIM31A0A1B0GVY4 71 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 TRDV1A0A1B0GX56 115 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 C7orf71A4D174 169 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 CRYM-AS1A6NIL9 109 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 CT45A10P0DMU9 189 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 PGAM2P15259 253 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 HLA-DMAP28067 261 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 S100A7P31151 101 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 RCVRNP35243 200 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 GPX4P36969 197 aaPredicted RBP4.1□□□□□ -1.75
CD44-237ENST00000534082 PIGPP57054 158 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 SP6Q3SY56 376 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 TOR2AQ5JU69 321 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 GGNBP1Q5YKI7 109 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 OR4D10Q8NGI6 311 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 OR10G4Q8NGN3 311 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 MITD1Q8WV92 249 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 ODF3Q96PU9 254 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 C12orf57Q99622 126 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 NDUFB11Q9NX14 153 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 MUC17Q685J3 4493 aa4.1□□□□□ -1.75
CD44-237ENST00000534082 IGKV2D-24A0A075B6R9 120 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 TRAV8-1A0A0A6YYK1 113 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 SLC25A5P05141 298 aaKnown RBP4.09□□□□□ -1.75
CD44-237ENST00000534082 CDC34P49427 236 aaPredicted RBP4.09□□□□□ -1.75
CD44-237ENST00000534082 IFITM2Q01629 132 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 BTN1A1Q13410 526 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 SMCO1Q147U7 214 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 MEF2DQ14814 521 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 CT83Q5H943 113 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 DAZ4Q86SG3 579 aaKnown RBP4.09□□□□□ -1.75
CD44-237ENST00000534082 LGI3Q8N145 548 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.09□□□□□ -1.75
CD44-237ENST00000534082 BPIFCQ8NFQ6 507 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 RMI2Q96E14 147 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 SHANK2-AS3Q9BTD1 123 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 DAZ3Q9NR90 486 aaKnown RBP4.09□□□□□ -1.75
CD44-237ENST00000534082 SCN3BQ9NY72 215 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 TP53TG3Q9ULZ0 132 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 SSR3Q9UNL2 185 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 KIF25-AS1Q9Y6Z4 181 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 U3KQ87 197 aa4.09□□□□□ -1.75
CD44-237ENST00000534082 GGTLC3B5MD39 225 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 RGS10O43665 173 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 CLEC2LP0C7M8 214 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 CXCL2P19875 107 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 C14orf177Q52M58 125 aa4.08□□□□□ -1.76
CD44-237ENST00000534082 LBHQ53QV2 105 aaPredicted RBP4.08□□□□□ -1.76
CD44-237ENST00000534082 GPR107Q5VW38 600 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms