RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 FGF8P55075 233 aaPredicted RBP9.58□□□□□ -0.88
CMTM1-219ENST00000533953 GNG5P63218 68 aa9.58□□□□□ -0.88
CMTM1-219ENST00000533953 PRR9Q5T870 116 aa9.58□□□□□ -0.88
CMTM1-219ENST00000533953 FAM222AQ5U5X8 452 aa9.58□□□□□ -0.88
CMTM1-219ENST00000533953 PQLC2Q6ZP29 291 aa9.58□□□□□ -0.88
CMTM1-219ENST00000533953 TMUB2Q71RG4 321 aa9.58□□□□□ -0.88
CMTM1-219ENST00000533953 IQCF2Q8IXL9 164 aa9.58□□□□□ -0.88
CMTM1-219ENST00000533953 YTHDF2Q9Y5A9 579 aaKnown RBP9.58□□□□□ -0.88
CMTM1-219ENST00000533953 DIRC3C9JPN6 131 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 TSPOP30536 169 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 RNASE4P34096 147 aaKnown RBP9.57□□□□□ -0.88
CMTM1-219ENST00000533953 LEPP41159 167 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 BTN1A1Q13410 526 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 ZNF345Q14585 488 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 AKR1C8PQ5T2L2 129 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 C9orf47Q6ZRZ4 202 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 LYPD1Q8N2G4 141 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 FAM19A4Q96LR4 140 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 SGK494Q96LW2 274 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 LINC00477Q96M19 166 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 ZNF471Q9BX82 626 aaPredicted RBP9.57□□□□□ -0.88
CMTM1-219ENST00000533953 OTORQ9NRC9 128 aa9.57□□□□□ -0.88
CMTM1-219ENST00000533953 A0A0D9SG52 128 aa9.56□□□□□ -0.88
CMTM1-219ENST00000533953 BCL2L11O43521 198 aa9.56□□□□□ -0.88
CMTM1-219ENST00000533953 CSN1S1P47710 185 aa9.56□□□□□ -0.88
CMTM1-219ENST00000533953 LGALSLQ3ZCW2 172 aaPredicted RBP9.56□□□□□ -0.88
CMTM1-219ENST00000533953 TMEM78Q5T7P6 136 aa9.56□□□□□ -0.88
CMTM1-219ENST00000533953 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
CMTM1-219ENST00000533953 ZNF492Q9P255 531 aa9.56□□□□□ -0.88
CMTM1-219ENST00000533953 DKK2Q9UBU2 259 aa9.56□□□□□ -0.88
CMTM1-219ENST00000533953 DYNC2H1Q8NCM8 4307 aaKnown RBP9.55□□□□□ -0.88
CMTM1-219ENST00000533953 TRAV8-1A0A0A6YYK1 113 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 KANTRA0A1W2PQU2 76 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 PLAC8L1A1L4L8 177 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 NUPR2A6NF83 97 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 CXorf1O96002 111 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 SPART-AS1P0CW21 52 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 ZNF138P52744 262 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 TAS2R60P59551 318 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 GOLT1AQ6ZVE7 132 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 TCTE3Q8IZS6 198 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 CMTM2Q8TAZ6 248 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 SUN5Q8TC36 379 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 ODF3Q96PU9 254 aa9.55□□□□□ -0.88
CMTM1-219ENST00000533953 LCE6AA0A183 80 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 CTXND1A0A1B0GTU2 59 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 A0A1B0GV50 99 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 C7orf71A4D174 169 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 TMEM189A5PLL7 270 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 KLLNB2CW77 178 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 H7BYZ3 331 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 PFDN1O60925 122 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 SLC25A5P05141 298 aaKnown RBP9.54□□□□□ -0.88
CMTM1-219ENST00000533953 GPX1P07203 203 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 UBE2G2P60604 165 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 SUMO1P63165 101 aaKnown RBP9.54□□□□□ -0.88
CMTM1-219ENST00000533953 RXFP4Q8TDU9 374 aa9.54□□□□□ -0.88
CMTM1-219ENST00000533953 GGTLC3B5MD39 225 aa9.53□□□□□ -0.88
CMTM1-219ENST00000533953 IGLL5B9A064 214 aa9.53□□□□□ -0.88
CMTM1-219ENST00000533953 ZNF324O75467 553 aaPredicted RBP9.53□□□□□ -0.88
CMTM1-219ENST00000533953 HTN3P15516 51 aa9.53□□□□□ -0.88
CMTM1-219ENST00000533953 CRISP2P16562 243 aa9.53□□□□□ -0.88
CMTM1-219ENST00000533953 AKAP14Q86UN6 197 aa9.53□□□□□ -0.88
CMTM1-219ENST00000533953 TMEM256Q8N2U0 113 aa9.53□□□□□ -0.88
CMTM1-219ENST00000533953 TMED6Q8WW62 240 aa9.53□□□□□ -0.88
CMTM1-219ENST00000533953 TVP23CQ96ET8 276 aa9.53□□□□□ -0.88
CMTM1-219ENST00000533953 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
CMTM1-219ENST00000533953 PLECQ15149 4684 aaKnown RBP9.52□□□□□ -0.89
CMTM1-219ENST00000533953 DEFB131BA0A096LNP1 70 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 MAP1LC3B2A6NCE7 125 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 C1QBP02746 253 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 SEC11BP0C7V7 166 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 DEFB130BP0DP73 79 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 DEFB130AP0DP74 79 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 FAM74A1Q5RGS3 127 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 FAM213BQ8TBF2 198 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 NIPSNAP3BQ9BS92 247 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 MAP1LC3BQ9GZQ8 125 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 NOP10Q9NPE3 64 aaKnown RBP9.52□□□□□ -0.89
CMTM1-219ENST00000533953 TMEM167BQ9NRX6 74 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 TP53TG3Q9ULZ0 132 aa9.52□□□□□ -0.89
CMTM1-219ENST00000533953 RYR3Q15413 4870 aa9.51□□□□□ -0.89
CMTM1-219ENST00000533953 RBAKDNA6NC62 111 aa9.51□□□□□ -0.89
CMTM1-219ENST00000533953 DAD1P61803 113 aa9.51□□□□□ -0.89
CMTM1-219ENST00000533953 RNASE8Q8TDE3 154 aaKnown RBP9.51□□□□□ -0.89
CMTM1-219ENST00000533953 C2CD4CQ8TF44 421 aa9.51□□□□□ -0.89
CMTM1-219ENST00000533953 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
CMTM1-219ENST00000533953 C20orf144Q9BQM9 153 aa9.51□□□□□ -0.89
CMTM1-219ENST00000533953 EPDR1Q9UM22 224 aa9.51□□□□□ -0.89
CMTM1-219ENST00000533953 TRAV34A0A0B4J273 112 aa9.5□□□□□ -0.89
CMTM1-219ENST00000533953 F6UZH7 168 aa9.5□□□□□ -0.89
CMTM1-219ENST00000533953 LY6G6CO95867 125 aa9.5□□□□□ -0.89
CMTM1-219ENST00000533953 TCRAP04437 139 aa9.5□□□□□ -0.89
CMTM1-219ENST00000533953 MUC21Q5SSG8 566 aa9.5□□□□□ -0.89
CMTM1-219ENST00000533953 CCDC28AQ8IWP9 274 aa9.5□□□□□ -0.89
CMTM1-219ENST00000533953 C16orf74Q96GX8 76 aa9.5□□□□□ -0.89
CMTM1-219ENST00000533953 GSN-AS1Q9NRJ2 163 aa9.5□□□□□ -0.89
CMTM1-219ENST00000533953 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
CMTM1-219ENST00000533953 C11orf94C9JXX5 98 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms