RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ZNF503Q96F45 646 aa9.6□□□□□ -0.87
CAPN1-227ENST00000533909 DKK2Q9UBU2 259 aa9.6□□□□□ -0.87
CAPN1-227ENST00000533909 RPH3ALQ9UNE2 315 aa9.6□□□□□ -0.87
CAPN1-227ENST00000533909 TRAV12-3A0A0B4J271 114 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 LY6G6CO95867 125 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 SLC25A5P05141 298 aaKnown RBP9.59□□□□□ -0.87
CAPN1-227ENST00000533909 GPX1P07203 203 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 ARL14EPLP0DKL9 152 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 RNASE4P34096 147 aaKnown RBP9.59□□□□□ -0.87
CAPN1-227ENST00000533909 DAD1P61803 113 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 AKR1C8PQ5T2L2 129 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 C9orf47Q6ZRZ4 202 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 RAB24Q969Q5 203 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 C16orf74Q96GX8 76 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 AGPAT4-IT1Q9H0P7 198 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 OTORQ9NRC9 128 aa9.59□□□□□ -0.87
CAPN1-227ENST00000533909 C7orf71A4D174 169 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 PGPA6NDG6 321 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 LYRM9A8MSI8 78 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 CXorf1O96002 111 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 PRM2P04554 102 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 HTN3P15516 51 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 ZNF138P52744 262 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 TCTAP57738 103 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 KIR3DS1Q14943 382 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 ZNF493Q6ZR52 646 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 VGLL1Q99990 258 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 ARPC5LQ9BPX5 153 aa9.58□□□□□ -0.88
CAPN1-227ENST00000533909 G3V3Q6 166 aa9.57□□□□□ -0.88
CAPN1-227ENST00000533909 STAG3L2P0CL84 134 aa9.57□□□□□ -0.88
CAPN1-227ENST00000533909 STAG3L3P0CL85 134 aa9.57□□□□□ -0.88
CAPN1-227ENST00000533909 DEFB130BP0DP73 79 aa9.57□□□□□ -0.88
CAPN1-227ENST00000533909 DEFB130AP0DP74 79 aa9.57□□□□□ -0.88
CAPN1-227ENST00000533909 TMEM263Q8WUH6 116 aaKnown RBP9.57□□□□□ -0.88
CAPN1-227ENST00000533909 LINC00476Q8WZB0 136 aa9.57□□□□□ -0.88
CAPN1-227ENST00000533909 TMEM167BQ9NRX6 74 aa9.57□□□□□ -0.88
CAPN1-227ENST00000533909 A0A0D9SG52 128 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 KANTRA0A1W2PQU2 76 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 RBAKDNA6NC62 111 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 HMSDA8MTL9 139 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 SNURFLB1AK76 121 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 DIRC3C9JPN6 131 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 PFDN1O60925 122 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 NMBP08949 121 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 AZU1P20160 251 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 GCHFRP30047 84 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 ZNF345Q14585 488 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 KCNRGQ8N5I3 272 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 Q8TAT8 98 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 PYGO2Q9BRQ0 406 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 ZNF492Q9P255 531 aa9.56□□□□□ -0.88
CAPN1-227ENST00000533909 TIMM8BQ9Y5J9 83 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-227ENST00000533909 IGHV4-4A0A075B6R2 117 aa9.55□□□□□ -0.88
CAPN1-227ENST00000533909 CTXND1A0A1B0GTU2 59 aa9.55□□□□□ -0.88
CAPN1-227ENST00000533909 K7EQM0 130 aa9.55□□□□□ -0.88
CAPN1-227ENST00000533909 RGS13O14921 159 aa9.55□□□□□ -0.88
CAPN1-227ENST00000533909 BTN1A1Q13410 526 aa9.55□□□□□ -0.88
CAPN1-227ENST00000533909 GOLT1AQ6ZVE7 132 aa9.55□□□□□ -0.88
CAPN1-227ENST00000533909 NDUFAF3Q9BU61 184 aa9.55□□□□□ -0.88
CAPN1-227ENST00000533909 ZNF471Q9BX82 626 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-227ENST00000533909 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
CAPN1-227ENST00000533909 DYNC2H1Q8NCM8 4307 aaKnown RBP9.55□□□□□ -0.88
CAPN1-227ENST00000533909 TRBV7-9A0A0J9YWB2 115 aa9.54□□□□□ -0.88
CAPN1-227ENST00000533909 CBY3A6NI87 242 aa9.54□□□□□ -0.88
CAPN1-227ENST00000533909 KLLNB2CW77 178 aa9.54□□□□□ -0.88
CAPN1-227ENST00000533909 CRISP2P16562 243 aa9.54□□□□□ -0.88
CAPN1-227ENST00000533909 EIF5AP63241 154 aaKnown RBP9.54□□□□□ -0.88
CAPN1-227ENST00000533909 CD300CQ08708 224 aa9.54□□□□□ -0.88
CAPN1-227ENST00000533909 ZNF680Q8NEM1 530 aa9.54□□□□□ -0.88
CAPN1-227ENST00000533909 ST6GAL2Q96JF0 529 aa9.54□□□□□ -0.88
CAPN1-227ENST00000533909 FAM19A4Q96LR4 140 aa9.54□□□□□ -0.88
CAPN1-227ENST00000533909 NOP10Q9NPE3 64 aaKnown RBP9.54□□□□□ -0.88
CAPN1-227ENST00000533909 BCL2L11O43521 198 aa9.53□□□□□ -0.88
CAPN1-227ENST00000533909 EIF4E3Q8N5X7 224 aaKnown RBP9.53□□□□□ -0.88
CAPN1-227ENST00000533909 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
CAPN1-227ENST00000533909 C5orf17Q8NAS9 161 aa9.53□□□□□ -0.88
CAPN1-227ENST00000533909 OR11H4Q8NGC9 324 aa9.53□□□□□ -0.88
CAPN1-227ENST00000533909 STOML3Q8TAV4 291 aa9.53□□□□□ -0.88
CAPN1-227ENST00000533909 RNASE8Q8TDE3 154 aaKnown RBP9.53□□□□□ -0.88
CAPN1-227ENST00000533909 NDFIP1Q9BT67 221 aa9.53□□□□□ -0.88
CAPN1-227ENST00000533909 CYTL1Q9NRR1 136 aa9.53□□□□□ -0.88
CAPN1-227ENST00000533909 LENEPQ9Y5L5 61 aa9.53□□□□□ -0.88
CAPN1-227ENST00000533909 SERTM2A0A1B0GWG4 89 aa9.52□□□□□ -0.89
CAPN1-227ENST00000533909 IFNA7P01567 189 aa9.52□□□□□ -0.89
CAPN1-227ENST00000533909 GNG5P63218 68 aa9.52□□□□□ -0.89
CAPN1-227ENST00000533909 LGALS9CQ6DKI2 356 aa9.52□□□□□ -0.89
CAPN1-227ENST00000533909 ZFAND2AQ8N6M9 145 aa9.52□□□□□ -0.89
CAPN1-227ENST00000533909 TMED6Q8WW62 240 aa9.52□□□□□ -0.89
CAPN1-227ENST00000533909 FAM210BQ96KR6 192 aa9.52□□□□□ -0.89
CAPN1-227ENST00000533909 LYSTQ99698 3801 aa9.52□□□□□ -0.89
CAPN1-227ENST00000533909 APLNQ9ULZ1 77 aa9.52□□□□□ -0.89
CAPN1-227ENST00000533909 RYR3Q15413 4870 aa9.51□□□□□ -0.89
CAPN1-227ENST00000533909 hCG_2014768A0A024R1R8 64 aa9.51□□□□□ -0.89
CAPN1-227ENST00000533909 PLAC8L1A1L4L8 177 aa9.51□□□□□ -0.89
CAPN1-227ENST00000533909 MAP1LC3B2A6NCE7 125 aa9.51□□□□□ -0.89
CAPN1-227ENST00000533909 F5H768 121 aa9.51□□□□□ -0.89
CAPN1-227ENST00000533909 ATP5G1P05496 136 aa9.51□□□□□ -0.89
CAPN1-227ENST00000533909 ATP5G3P48201 142 aa9.51□□□□□ -0.89
CAPN1-227ENST00000533909 FGF8P55075 233 aaPredicted RBP9.51□□□□□ -0.89
CAPN1-227ENST00000533909 SUMO1P63165 101 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms