RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 LY6DQ14210 128 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 ACP7Q6ZNF0 438 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 LINC00479Q96M42 142 aa6.4□□□□□ -1.38
CSRP1-218ENST00000533402 RPL15P61313 204 aaKnown RBP6.4□□□□□ -1.39
CSRP1-218ENST00000533402 COLCA1Q6ZS62 124 aa6.4□□□□□ -1.39
CSRP1-218ENST00000533402 DEFB104AQ8WTQ1 72 aa6.4□□□□□ -1.39
CSRP1-218ENST00000533402 SCRT2Q9NQ03 307 aa6.4□□□□□ -1.39
CSRP1-218ENST00000533402 TTC28Q96AY4 2481 aa6.4□□□□□ -1.39
CSRP1-218ENST00000533402 IGKV1D-43A0A0B4J1Z2 117 aa6.4□□□□□ -1.39
CSRP1-218ENST00000533402 PRIMA1Q86XR5 153 aa6.4□□□□□ -1.39
CSRP1-218ENST00000533402 ATP6V0E2Q8NHE4 81 aa6.4□□□□□ -1.39
CSRP1-218ENST00000533402 MED13Q9UHV7 2174 aa6.4□□□□□ -1.39
CSRP1-218ENST00000533402 IGKV2-40A0A087WW87 121 aaPredicted RBP6.4□□□□□ -1.39
CSRP1-218ENST00000533402 IGKV2D-40P01614 121 aaPredicted RBP6.4□□□□□ -1.39
CSRP1-218ENST00000533402 APOC4P55056 127 aa6.4□□□□□ -1.39
CSRP1-218ENST00000533402 A0A087WX48 190 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 TRGV4A0A0C4DH28 118 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 PMS2P5A8MQ11 134 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 MRPL35Q9NZE8 188 aaKnown RBP6.39□□□□□ -1.39
CSRP1-218ENST00000533402 OOSP1A8MZH6 123 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 FOXG1P55316 489 aaPredicted RBP6.39□□□□□ -1.39
CSRP1-218ENST00000533402 ZNF329Q86UD4 541 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 CHCHD5Q9BSY4 110 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 SAA2-SAA4A0A096LPE2 208 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 C4orf51C9J302 202 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 COX6A1P12074 109 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 ZNF474Q6S9Z5 364 aaPredicted RBP6.39□□□□□ -1.39
CSRP1-218ENST00000533402 ZNF497Q6ZNH5 498 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 IGKV1-5P01602 117 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 ATP5G1P05496 136 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 LINC00114Q6XXX2 140 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 TINCRA0A1B0GVN0 87 aa6.39□□□□□ -1.39
CSRP1-218ENST00000533402 RPL32P62910 135 aaKnown RBP6.39□□□□□ -1.39
CSRP1-218ENST00000533402 NTF4P34130 210 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 LY6G5BQ8NDX9 201 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 ADARB2-AS1A8MUL3 147 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 CFC1BP0CG36 223 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 CFC1P0CG37 223 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 SAA2P0DJI9 122 aaPredicted RBP6.38□□□□□ -1.39
CSRP1-218ENST00000533402 FAM104BQ5XKR9 115 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 PRR14LQ5THK1 2151 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 A0A0B4J2C4 111 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 SHISA9B4DS77 424 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 MT-ATP8P03928 68 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 DKK2Q9UBU2 259 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 ROS1P08922 2347 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 IGLV3-32A0A0A0MS00 114 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 IGHG2P01859 326 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 IMMP1LQ96LU5 166 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 F8VRH5 84 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 IL17RELQ6ZVW7 336 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
CSRP1-218ENST00000533402 WIPF3A6NGB9 483 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 RNASE2P10153 161 aaKnown RBP6.38□□□□□ -1.39
CSRP1-218ENST00000533402 ZNF876PQ49A33 203 aa6.38□□□□□ -1.39
CSRP1-218ENST00000533402 UQCRQO14949 82 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 NUPR1O60356 82 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 TRBV25-1A0A075B6N4 114 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 PRDM6Q9NQX0 595 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 J3QLI3 93 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 M0QXV9 152 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 HOXD3P31249 432 aaPredicted RBP6.37□□□□□ -1.39
CSRP1-218ENST00000533402 Q8N8P6 123 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 DSCR8Q96T75 97 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 ANAPC10Q9UM13 185 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 INS-IGF2F8WCM5 200 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 INSP01308 110 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 CR1LQ2VPA4 569 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 Q86TA4 180 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 C17orf82Q86X59 251 aaPredicted RBP6.37□□□□□ -1.39
CSRP1-218ENST00000533402 C14orf178Q8N769 122 aaPredicted RBP6.37□□□□□ -1.39
CSRP1-218ENST00000533402 ZNF747Q9BV97 191 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 ZNF492Q9P255 531 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 TMEM213A2RRL7 107 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 PSPNO60542 156 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 LHBP01229 141 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 ZNF726P1Q15940 193 aa6.37□□□□□ -1.39
CSRP1-218ENST00000533402 NDUFS7O75251 213 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 BAALC-AS2P0C853 105 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 F6UB75 175 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 H0YJW9 148 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 IGHG3P01860 377 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 C1orf195Q5TG92 126 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 C2orf66Q6UXQ4 117 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 C20orf78Q9BR46 151 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 IGKV3D-7A0A0C4DH55 119 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 F5H768 121 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 PRB1P04280 392 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 EGR2P11161 476 aaPredicted RBP6.36□□□□□ -1.39
CSRP1-218ENST00000533402 SPTSSBQ8NFR3 76 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 TMEM141Q96I45 108 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 REPIN1Q9BWE0 567 aaKnown RBP6.36□□□□□ -1.39
CSRP1-218ENST00000533402 PTPRSQ13332 1948 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 FXYD2P54710 66 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 FAM231DQ6ZW35 169 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 TP53TG1Q9Y2A0 90 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 MINOS1Q5TGZ0 78 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 LYZL4Q96KX0 146 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 LINC00312Q9Y6C7 94 aa6.36□□□□□ -1.39
CSRP1-218ENST00000533402 MINOS1-NBL1R4GNA1 71 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms