RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 M0R036 132 aa11.91□□□□□ -0.5
TRIM3-213ENST00000533309 SNAPINO95295 136 aa11.91□□□□□ -0.5
TRIM3-213ENST00000533309 ZNF705DP0CH99 300 aaPredicted RBP11.91□□□□□ -0.5
TRIM3-213ENST00000533309 ZNF705BP0CI00 300 aaPredicted RBP11.91□□□□□ -0.5
TRIM3-213ENST00000533309 ERCC8Q13216 396 aa11.91□□□□□ -0.5
TRIM3-213ENST00000533309 ADIRFQ15847 76 aa11.91□□□□□ -0.5
TRIM3-213ENST00000533309 PSMG4Q5JS54 123 aa11.91□□□□□ -0.5
TRIM3-213ENST00000533309 PRNTQ86SH4 94 aa11.91□□□□□ -0.5
TRIM3-213ENST00000533309 BAGE2Q86Y30 109 aa11.91□□□□□ -0.5
TRIM3-213ENST00000533309 MLST8Q9BVC4 326 aa11.91□□□□□ -0.5
TRIM3-213ENST00000533309 C9orf47Q6ZRZ4 202 aa11.9□□□□□ -0.5
TRIM3-213ENST00000533309 LURAP1LQ8IV03 231 aa11.9□□□□□ -0.5
TRIM3-213ENST00000533309 WFDC9Q8NEX5 89 aa11.9□□□□□ -0.5
TRIM3-213ENST00000533309 OR2K2Q8NGT1 345 aa11.9□□□□□ -0.5
TRIM3-213ENST00000533309 Q8TAT8 98 aa11.9□□□□□ -0.5
TRIM3-213ENST00000533309 AGPAT4-IT1Q9H0P7 198 aa11.9□□□□□ -0.5
TRIM3-213ENST00000533309 OR4C46A6NHA9 309 aa11.89□□□□□ -0.51
TRIM3-213ENST00000533309 FBLL1A6NHQ2 334 aaKnown RBP11.89□□□□□ -0.51
TRIM3-213ENST00000533309 OR8A1Q8NGG7 326 aa11.89□□□□□ -0.51
TRIM3-213ENST00000533309 ISOC2Q96AB3 205 aa11.89□□□□□ -0.51
TRIM3-213ENST00000533309 GPR61Q9BZJ8 451 aa11.89□□□□□ -0.51
TRIM3-213ENST00000533309 C7orf77A4D0Y5 90 aa11.89□□□□□ -0.51
TRIM3-213ENST00000533309 NPIPB6E9PJ23 425 aa11.89□□□□□ -0.51
TRIM3-213ENST00000533309 GDF5OSQ5U4N7 250 aa11.89□□□□□ -0.51
TRIM3-213ENST00000533309 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
TRIM3-213ENST00000533309 OR5I1Q13606 314 aa11.88□□□□□ -0.51
TRIM3-213ENST00000533309 RHEBQ15382 184 aa11.88□□□□□ -0.51
TRIM3-213ENST00000533309 ODF3L2Q3SX64 289 aa11.88□□□□□ -0.51
TRIM3-213ENST00000533309 TMEM183AQ8IXX5 376 aa11.88□□□□□ -0.51
TRIM3-213ENST00000533309 PRR25Q96S07 402 aa11.88□□□□□ -0.51
TRIM3-213ENST00000533309 MAP6D1Q9H9H5 199 aa11.88□□□□□ -0.51
TRIM3-213ENST00000533309 ZFP30Q9Y2G7 519 aa11.88□□□□□ -0.51
TRIM3-213ENST00000533309 SCO1O75880 301 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 GCGP01275 180 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 CD33P20138 364 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 INSL3P51460 131 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 DEFB131AP59861 70 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 HIST1H1AQ02539 215 aaPredicted RBP11.87□□□□□ -0.51
TRIM3-213ENST00000533309 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 C9orf66Q5T8R8 295 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 OR10J6PQ8NGY7 276 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 C8orf49Q96NF6 230 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 PPP1R14DQ9NXH3 145 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 ZNF492Q9P255 531 aa11.87□□□□□ -0.51
TRIM3-213ENST00000533309 A0A0J9YX75 114 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 B4DEV8 164 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 MGST1P10620 155 aaKnown RBP11.86□□□□□ -0.51
TRIM3-213ENST00000533309 ZNF138P52744 262 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 COX8CQ7Z4L0 72 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 ZC2HC1AQ96GY0 325 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 MDFIQ99750 246 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 CT45A10P0DMU9 189 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 ZNF124Q15973 351 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 BEAN1Q3B7T3 259 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 RNF212Q495C1 297 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 LINC00322Q6ZN03 302 aaPredicted RBP11.86□□□□□ -0.51
TRIM3-213ENST00000533309 FOXI2Q6ZQN5 318 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 SAV1Q9H4B6 383 aaPredicted RBP11.86□□□□□ -0.51
TRIM3-213ENST00000533309 RPS10P5Q9NQ39 176 aa11.86□□□□□ -0.51
TRIM3-213ENST00000533309 SAPCD1Q5SSQ6 148 aa11.85□□□□□ -0.51
TRIM3-213ENST00000533309 FAM19A4Q96LR4 140 aa11.85□□□□□ -0.51
TRIM3-213ENST00000533309 LINC00477Q96M19 166 aa11.85□□□□□ -0.51
TRIM3-213ENST00000533309 MCRIP2Q9BUT9 160 aaKnown RBP11.85□□□□□ -0.51
TRIM3-213ENST00000533309 A0A087WWC5 75 aa11.84□□□□□ -0.51
TRIM3-213ENST00000533309 IGLL1P15814 213 aa11.84□□□□□ -0.51
TRIM3-213ENST00000533309 PRR27Q6MZM9 219 aa11.84□□□□□ -0.51
TRIM3-213ENST00000533309 SFRP2Q96HF1 295 aa11.84□□□□□ -0.51
TRIM3-213ENST00000533309 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
TRIM3-213ENST00000533309 KNCNA6PVL3 124 aa11.83□□□□□ -0.52
TRIM3-213ENST00000533309 WIPF1O43516 503 aa11.83□□□□□ -0.52
TRIM3-213ENST00000533309 CRIP1P50238 77 aa11.83□□□□□ -0.52
TRIM3-213ENST00000533309 APRG1Q8IVJ8 170 aa11.83□□□□□ -0.52
TRIM3-213ENST00000533309 NDFIP1Q9BT67 221 aa11.83□□□□□ -0.52
TRIM3-213ENST00000533309 LENEPQ9Y5L5 61 aa11.83□□□□□ -0.52
TRIM3-213ENST00000533309 C19orf71A6NCJ1 209 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 CD7P09564 240 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 HLA-DRB4P13762 266 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 ZNF80P51504 273 aaPredicted RBP11.82□□□□□ -0.52
TRIM3-213ENST00000533309 EBLN2Q6P2I7 272 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 ZFAND2AQ8N6M9 145 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 C19orf73Q9NVV2 129 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 HLA-DRB4X5D2U9 266 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 A8MTW9 85 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 MT-ND4LP03901 98 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 ERVFC1-1P60608 527 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 ACTL10Q5JWF8 245 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 IBA57Q5T440 356 aaKnown RBP11.82□□□□□ -0.52
TRIM3-213ENST00000533309 PRR9Q5T870 116 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 FAM231DQ6ZW35 169 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 FAM110AQ9BQ89 295 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 OSTCQ9NRP0 149 aa11.82□□□□□ -0.52
TRIM3-213ENST00000533309 OR11H12B2RN74 326 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 H3BMM0 161 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 CRISP2P16562 243 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 SMUG1Q53HV7 270 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 TMEM88Q6PEY1 159 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 AMTNQ6UX39 209 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 CBLN2Q8IUK8 224 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 NUDT10Q8NFP7 164 aa11.81□□□□□ -0.52
TRIM3-213ENST00000533309 OR10G8Q8NGN5 311 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms