RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ERVFC1-1P60608 527 aa14.07□□□□□ -0.16
SMPD1-208ENST00000533123 UBE2G1P62253 170 aa14.07□□□□□ -0.16
SMPD1-208ENST00000533123 GOLT1AQ6ZVE7 132 aa14.07□□□□□ -0.16
SMPD1-208ENST00000533123 BAGE2Q86Y30 109 aa14.07□□□□□ -0.16
SMPD1-208ENST00000533123 KLF12Q9Y4X4 402 aa14.07□□□□□ -0.16
SMPD1-208ENST00000533123 CCL24O00175 119 aa14.06□□□□□ -0.16
SMPD1-208ENST00000533123 TYMSP04818 313 aa14.06□□□□□ -0.16
SMPD1-208ENST00000533123 TM4SF20Q53R12 229 aa14.06□□□□□ -0.16
SMPD1-208ENST00000533123 NDUFA11Q86Y39 141 aa14.06□□□□□ -0.16
SMPD1-208ENST00000533123 CITED1Q99966 193 aa14.06□□□□□ -0.16
SMPD1-208ENST00000533123 PDE6HQ13956 83 aa14.06□□□□□ -0.16
SMPD1-208ENST00000533123 IGFL4Q6B9Z1 124 aa14.06□□□□□ -0.16
SMPD1-208ENST00000533123 S100A7P31151 101 aa14.05□□□□□ -0.16
SMPD1-208ENST00000533123 KLF5Q13887 457 aaPredicted RBP14.05□□□□□ -0.16
SMPD1-208ENST00000533123 LYPD1Q8N2G4 141 aa14.05□□□□□ -0.16
SMPD1-208ENST00000533123 TMEM158Q8WZ71 300 aa14.05□□□□□ -0.16
SMPD1-208ENST00000533123 EDN2P20800 178 aa14.05□□□□□ -0.16
SMPD1-208ENST00000533123 FHL3Q13643 280 aa14.05□□□□□ -0.16
SMPD1-208ENST00000533123 ZNF124Q15973 351 aa14.05□□□□□ -0.16
SMPD1-208ENST00000533123 TMEM18Q96B42 140 aa14.05□□□□□ -0.16
SMPD1-208ENST00000533123 U3KQE9 123 aa14.05□□□□□ -0.16
SMPD1-208ENST00000533123 IGLV2-11P01706 119 aa14.04□□□□□ -0.16
SMPD1-208ENST00000533123 DLX4Q92988 240 aaPredicted RBP14.04□□□□□ -0.16
SMPD1-208ENST00000533123 FMC1Q96HJ9 113 aa14.04□□□□□ -0.16
SMPD1-208ENST00000533123 DAZ1Q9NQZ3 744 aaKnown RBP14.04□□□□□ -0.16
SMPD1-208ENST00000533123 VWFP04275 2813 aa14.04□□□□□ -0.16
SMPD1-208ENST00000533123 ASCL2Q99929 193 aa14.03□□□□□ -0.16
SMPD1-208ENST00000533123 AAMDCQ9H7C9 122 aa14.03□□□□□ -0.16
SMPD1-208ENST00000533123 V9GYV3 84 aa14.03□□□□□ -0.16
SMPD1-208ENST00000533123 ZNF785A8K8V0 405 aa14.03□□□□□ -0.16
SMPD1-208ENST00000533123 LTAP01374 205 aa14.03□□□□□ -0.16
SMPD1-208ENST00000533123 HLA-DMBP28068 263 aa14.03□□□□□ -0.16
SMPD1-208ENST00000533123 GPR82Q96P67 336 aa14.03□□□□□ -0.16
SMPD1-208ENST00000533123 NEU1Q99519 415 aa14.03□□□□□ -0.16
SMPD1-208ENST00000533123 DIRC3C9JPN6 131 aa14.02□□□□□ -0.16
SMPD1-208ENST00000533123 EREGO14944 169 aa14.02□□□□□ -0.16
SMPD1-208ENST00000533123 PRR27Q6MZM9 219 aa14.02□□□□□ -0.16
SMPD1-208ENST00000533123 Q86TA4 180 aa14.02□□□□□ -0.16
SMPD1-208ENST00000533123 UFC1Q9Y3C8 167 aa14.02□□□□□ -0.16
SMPD1-208ENST00000533123 LGALS9O00182 355 aa14.02□□□□□ -0.17
SMPD1-208ENST00000533123 NUTF2P61970 127 aaKnown RBP14.02□□□□□ -0.17
SMPD1-208ENST00000533123 PSG9Q00887 426 aa14.02□□□□□ -0.17
SMPD1-208ENST00000533123 IBA57Q5T440 356 aaKnown RBP14.02□□□□□ -0.17
SMPD1-208ENST00000533123 C1orf194Q5T5A4 169 aa14.02□□□□□ -0.17
SMPD1-208ENST00000533123 KCNIP4Q6PIL6 250 aa14.02□□□□□ -0.17
SMPD1-208ENST00000533123 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.02□□□□□ -0.17
SMPD1-208ENST00000533123 GBGT1Q8N5D6 347 aa14.02□□□□□ -0.17
SMPD1-208ENST00000533123 TMEM213A2RRL7 107 aa14.01□□□□□ -0.17
SMPD1-208ENST00000533123 K7EMT4 169 aa14.01□□□□□ -0.17
SMPD1-208ENST00000533123 IQCJQ1A5X6 159 aa14.01□□□□□ -0.17
SMPD1-208ENST00000533123 PRNTQ86SH4 94 aa14.01□□□□□ -0.17
SMPD1-208ENST00000533123 ZNF331Q9NQX6 463 aaPredicted RBP14.01□□□□□ -0.17
SMPD1-208ENST00000533123 TRRAPQ9Y4A5 3859 aa14.01□□□□□ -0.17
SMPD1-208ENST00000533123 A0A087X0K7 114 aa14□□□□□ -0.17
SMPD1-208ENST00000533123 MLST8Q9BVC4 326 aa14□□□□□ -0.17
SMPD1-208ENST00000533123 OSTCQ9NRP0 149 aa14□□□□□ -0.17
SMPD1-208ENST00000533123 SELENOKQ9Y6D0 94 aa14□□□□□ -0.17
SMPD1-208ENST00000533123 TCAPO15273 167 aa14□□□□□ -0.17
SMPD1-208ENST00000533123 RAB4BP61018 213 aa14□□□□□ -0.17
SMPD1-208ENST00000533123 C3orf56Q8N813 242 aa14□□□□□ -0.17
SMPD1-208ENST00000533123 IMMP2LQ96T52 175 aa14□□□□□ -0.17
SMPD1-208ENST00000533123 IL36BQ9NZH7 164 aa14□□□□□ -0.17
SMPD1-208ENST00000533123 IGHV7-4-1A0A0J9YVY3 117 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 ZNF705FA8MVS1 300 aaPredicted RBP13.99□□□□□ -0.17
SMPD1-208ENST00000533123 CA1P00915 261 aaPredicted RBP13.99□□□□□ -0.17
SMPD1-208ENST00000533123 C16orf54Q6UWD8 224 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 C12orf54Q6X4T0 127 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 LINC00322Q6ZN03 302 aaPredicted RBP13.99□□□□□ -0.17
SMPD1-208ENST00000533123 RNF182Q8N6D2 247 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 OR9G4Q8NGQ1 327 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 ZNF253O75346 499 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 TMEM75Q8N9X5 138 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 GLMPQ8WWB7 406 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 ZNF747Q9BV97 191 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 RHPN1-AS1Q9BWJ2 59 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 SMPXQ9UHP9 88 aa13.99□□□□□ -0.17
SMPD1-208ENST00000533123 IGKV2-40A0A087WW87 121 aaPredicted RBP13.98□□□□□ -0.17
SMPD1-208ENST00000533123 C2orf70A6NJV1 201 aa13.98□□□□□ -0.17
SMPD1-208ENST00000533123 IGKV2D-40P01614 121 aaPredicted RBP13.98□□□□□ -0.17
SMPD1-208ENST00000533123 CBLN1P23435 193 aa13.98□□□□□ -0.17
SMPD1-208ENST00000533123 CSN1S1P47710 185 aa13.98□□□□□ -0.17
SMPD1-208ENST00000533123 PSG3Q16557 428 aa13.98□□□□□ -0.17
SMPD1-208ENST00000533123 SNHG12Q9BXW3 62 aa13.98□□□□□ -0.17
SMPD1-208ENST00000533123 K7EQM0 130 aa13.97□□□□□ -0.17
SMPD1-208ENST00000533123 CHEK1O14757 476 aa13.97□□□□□ -0.17
SMPD1-208ENST00000533123 TCL1AP56279 114 aa13.97□□□□□ -0.17
SMPD1-208ENST00000533123 NUDT10Q8NFP7 164 aa13.97□□□□□ -0.17
SMPD1-208ENST00000533123 SMIM12Q96EX1 92 aa13.97□□□□□ -0.17
SMPD1-208ENST00000533123 NUDT11Q96G61 164 aa13.97□□□□□ -0.17
SMPD1-208ENST00000533123 PEMTQ9UBM1 199 aa13.97□□□□□ -0.17
SMPD1-208ENST00000533123 PSG8Q9UQ74 426 aa13.97□□□□□ -0.17
SMPD1-208ENST00000533123 TRAPPC1Q9Y5R8 145 aa13.97□□□□□ -0.17
SMPD1-208ENST00000533123 A0A1W2PS18 150 aa13.96□□□□□ -0.17
SMPD1-208ENST00000533123 PF4P02776 101 aa13.96□□□□□ -0.17
SMPD1-208ENST00000533123 ADAMTSL5Q6ZMM2 481 aa13.96□□□□□ -0.17
SMPD1-208ENST00000533123 TMEM256Q8N2U0 113 aa13.96□□□□□ -0.17
SMPD1-208ENST00000533123 TRAV8-2A0A0B4J237 113 aa13.96□□□□□ -0.17
SMPD1-208ENST00000533123 OVOL1O14753 267 aa13.96□□□□□ -0.17
SMPD1-208ENST00000533123 FAM231DQ6ZW35 169 aa13.96□□□□□ -0.17
SMPD1-208ENST00000533123 TRBV6-1A0A0K0K1D8 114 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms