RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 OR10J4P0C629 311 aa12.04□□□□□ -0.48
PKP3-209ENST00000533069 PYYP10082 97 aa12.04□□□□□ -0.48
PKP3-209ENST00000533069 BCL2P10415 239 aa12.04□□□□□ -0.48
PKP3-209ENST00000533069 UQCC3Q6UW78 93 aa12.04□□□□□ -0.48
PKP3-209ENST00000533069 ZNF705AQ6ZN79 300 aaPredicted RBP12.04□□□□□ -0.48
PKP3-209ENST00000533069 NEU1Q99519 415 aa12.04□□□□□ -0.48
PKP3-209ENST00000533069 GNG13Q9P2W3 67 aa12.04□□□□□ -0.48
PKP3-209ENST00000533069 VAX2Q9UIW0 290 aa12.04□□□□□ -0.48
PKP3-209ENST00000533069 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
PKP3-209ENST00000533069 RBFOX3A6NFN3 312 aa12.03□□□□□ -0.48
PKP3-209ENST00000533069 SMIM9A6NGZ8 99 aa12.03□□□□□ -0.48
PKP3-209ENST00000533069 A8MTW9 85 aa12.03□□□□□ -0.48
PKP3-209ENST00000533069 C11orf94C9JXX5 98 aa12.03□□□□□ -0.48
PKP3-209ENST00000533069 F6UB75 175 aa12.03□□□□□ -0.48
PKP3-209ENST00000533069 DUSP14O95147 198 aaKnown RBP12.03□□□□□ -0.48
PKP3-209ENST00000533069 PEA15Q15121 130 aa12.03□□□□□ -0.48
PKP3-209ENST00000533069 EIF4E3Q8N5X7 224 aaKnown RBP12.03□□□□□ -0.48
PKP3-209ENST00000533069 AAMDCQ9H7C9 122 aa12.03□□□□□ -0.48
PKP3-209ENST00000533069 PRELID1Q9Y255 219 aa12.03□□□□□ -0.48
PKP3-209ENST00000533069 A0A1B0GV50 99 aa12.02□□□□□ -0.49
PKP3-209ENST00000533069 ZNF705FA8MVS1 300 aaPredicted RBP12.02□□□□□ -0.49
PKP3-209ENST00000533069 PDE6DO43924 150 aa12.02□□□□□ -0.49
PKP3-209ENST00000533069 ZNF705DP0CH99 300 aaPredicted RBP12.02□□□□□ -0.49
PKP3-209ENST00000533069 ZNF705BP0CI00 300 aaPredicted RBP12.02□□□□□ -0.49
PKP3-209ENST00000533069 CCL20P78556 96 aa12.02□□□□□ -0.49
PKP3-209ENST00000533069 ZNF506Q5JVG8 444 aa12.02□□□□□ -0.49
PKP3-209ENST00000533069 PCNPQ8WW12 178 aaKnown RBP12.02□□□□□ -0.49
PKP3-209ENST00000533069 EIF5A2Q9GZV4 153 aaKnown RBP12.02□□□□□ -0.49
PKP3-209ENST00000533069 OTORQ9NRC9 128 aa12.02□□□□□ -0.49
PKP3-209ENST00000533069 ZNF586Q9NXT0 402 aa12.02□□□□□ -0.49
PKP3-209ENST00000533069 FAM74A7A6NL05 159 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 F6UZH7 168 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 AMBPP02760 352 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 TCTAP57738 103 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 FXYD7P58549 80 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 MEF2BQ02080 365 aaPredicted RBP12.01□□□□□ -0.49
PKP3-209ENST00000533069 ZNF738Q8NE65 137 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 RXFP4Q8TDU9 374 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 C2CD4CQ8TF44 421 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 SLC35B3Q9H1N7 401 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 TMPRSS5Q9H3S3 457 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 GOLT1BQ9Y3E0 138 aa12.01□□□□□ -0.49
PKP3-209ENST00000533069 LOC102723971A0A1B0GUV8 181 aa12□□□□□ -0.49
PKP3-209ENST00000533069 SERTM2A0A1B0GWG4 89 aa12□□□□□ -0.49
PKP3-209ENST00000533069 TMEM189A5PLL7 270 aa12□□□□□ -0.49
PKP3-209ENST00000533069 H3BQ15 152 aa12□□□□□ -0.49
PKP3-209ENST00000533069 PAGE4O60829 102 aa12□□□□□ -0.49
PKP3-209ENST00000533069 HLA-DMBP28068 263 aa12□□□□□ -0.49
PKP3-209ENST00000533069 CNN1P51911 297 aaKnown RBP12□□□□□ -0.49
PKP3-209ENST00000533069 IGFL4Q6B9Z1 124 aa12□□□□□ -0.49
PKP3-209ENST00000533069 RNF182Q8N6D2 247 aa12□□□□□ -0.49
PKP3-209ENST00000533069 BLNKQ8WV28 456 aa12□□□□□ -0.49
PKP3-209ENST00000533069 RPUSD4Q96CM3 377 aaKnown RBP12□□□□□ -0.49
PKP3-209ENST00000533069 MRPL53Q96EL3 112 aaKnown RBP12□□□□□ -0.49
PKP3-209ENST00000533069 ZNF331Q9NQX6 463 aaPredicted RBP12□□□□□ -0.49
PKP3-209ENST00000533069 AGRNO00468 2067 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 TMEM250H0YL14 139 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 EIF3GO75821 320 aaKnown RBP eCLIP11.99□□□□□ -0.49
PKP3-209ENST00000533069 LY6G6CO95867 125 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 TOR2AQ5JU69 321 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 CST9LP1Q5W188 147 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 AMTNQ6UX39 209 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 COMMD7Q86VX2 200 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 C5orf17Q8NAS9 161 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 CMTM2Q8TAZ6 248 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 HIST1H2BAQ96A08 127 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 Q9H3A6 140 aa11.99□□□□□ -0.49
PKP3-209ENST00000533069 IGHV3OR16-12A0A075B7B8 117 aa11.98□□□□□ -0.49
PKP3-209ENST00000533069 TRAV10A0A0B4J240 114 aa11.98□□□□□ -0.49
PKP3-209ENST00000533069 FBLL1A6NHQ2 334 aaKnown RBP11.98□□□□□ -0.49
PKP3-209ENST00000533069 CSN1S1P47710 185 aa11.98□□□□□ -0.49
PKP3-209ENST00000533069 RANP62826 216 aaKnown RBP11.98□□□□□ -0.49
PKP3-209ENST00000533069 PSG3Q16557 428 aa11.98□□□□□ -0.49
PKP3-209ENST00000533069 IGF2BP2-AS1Q96M15 143 aa11.98□□□□□ -0.49
PKP3-209ENST00000533069 TEX48A0A1B0GUV7 120 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 K7EQM0 130 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 NDUFB4O95168 129 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 INSP01308 110 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 UBE2G2P60604 165 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 Q6ZTC4 211 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 CCDC28AQ8IWP9 274 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 OR8A1Q8NGG7 326 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 CELA1Q9UNI1 258 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 YTHDF2Q9Y5A9 579 aaKnown RBP11.97□□□□□ -0.49
PKP3-209ENST00000533069 HYDINQ4G0P3 5121 aa11.97□□□□□ -0.49
PKP3-209ENST00000533069 PGPA6NDG6 321 aa11.96□□□□□ -0.49
PKP3-209ENST00000533069 SUMO1P63165 101 aaKnown RBP11.96□□□□□ -0.49
PKP3-209ENST00000533069 HIST1H1AQ02539 215 aaPredicted RBP11.96□□□□□ -0.49
PKP3-209ENST00000533069 ICAM4Q14773 271 aa11.96□□□□□ -0.49
PKP3-209ENST00000533069 LGALS9CQ6DKI2 356 aa11.96□□□□□ -0.49
PKP3-209ENST00000533069 C1orf158Q8N1D5 194 aa11.96□□□□□ -0.49
PKP3-209ENST00000533069 TMEM208Q9BTX3 173 aa11.96□□□□□ -0.49
PKP3-209ENST00000533069 GGTLC3B5MD39 225 aa11.95□□□□□ -0.5
PKP3-209ENST00000533069 S100A9P06702 114 aaKnown RBP11.95□□□□□ -0.5
PKP3-209ENST00000533069 SPART-AS1P0CW21 52 aa11.95□□□□□ -0.5
PKP3-209ENST00000533069 SPINK13Q1W4C9 94 aa11.95□□□□□ -0.5
PKP3-209ENST00000533069 C11orf52Q96A22 123 aa11.95□□□□□ -0.5
PKP3-209ENST00000533069 ATG101Q9BSB4 218 aa11.95□□□□□ -0.5
PKP3-209ENST00000533069 IGLL5B9A064 214 aa11.94□□□□□ -0.5
PKP3-209ENST00000533069 SLC17A3O00476 420 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms