RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 Q6ZWC4 215 aa12.14□□□□□ -0.47
PCDHA3-202ENST00000532566 MCRIP2Q9BUT9 160 aaKnown RBP12.14□□□□□ -0.47
PCDHA3-202ENST00000532566 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
PCDHA3-202ENST00000532566 MRPL52Q86TS9 123 aaKnown RBP12.13□□□□□ -0.47
PCDHA3-202ENST00000532566 OR2K2Q8NGT1 345 aa12.13□□□□□ -0.47
PCDHA3-202ENST00000532566 GTSCR1Q86UQ5 136 aa12.13□□□□□ -0.47
PCDHA3-202ENST00000532566 ZC2HC1AQ96GY0 325 aa12.13□□□□□ -0.47
PCDHA3-202ENST00000532566 ZNF815PA8K554 130 aa12.13□□□□□ -0.47
PCDHA3-202ENST00000532566 TNFRSF6BO95407 300 aa12.13□□□□□ -0.47
PCDHA3-202ENST00000532566 C8orf86Q6ZUL3 223 aa12.13□□□□□ -0.47
PCDHA3-202ENST00000532566 SYNJ2BPP57105 145 aa12.12□□□□□ -0.47
PCDHA3-202ENST00000532566 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
PCDHA3-202ENST00000532566 ODF3L1Q8IXM7 274 aa12.12□□□□□ -0.47
PCDHA3-202ENST00000532566 TLN1Q9Y490 2541 aaKnown RBP12.12□□□□□ -0.47
PCDHA3-202ENST00000532566 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
PCDHA3-202ENST00000532566 CD300EQ496F6 205 aaPredicted RBP12.12□□□□□ -0.47
PCDHA3-202ENST00000532566 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 P0C879 139 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 ASPHD1Q5U4P2 390 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 COA6Q5JTJ3 125 aaKnown RBP12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 VCYO14598 125 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 LTAP01374 205 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 CD28P10747 220 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 LRP4O75096 1905 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 NDUFA4O00483 81 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 EMP1P54849 157 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 KLF2Q9Y5W3 355 aaPredicted RBP12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 IGF2RP11717 2491 aa12.11□□□□□ -0.47
PCDHA3-202ENST00000532566 PROP1O75360 226 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 A0A087X0K7 114 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 EREGO14944 169 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 HOXB4P17483 251 aaPredicted RBP12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 FAM120AOSQ5T036 256 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 SP5Q6BEB4 398 aaPredicted RBP12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 C17orf77Q96MU5 243 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 RCHY1Q96PM5 261 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 DYSFO75923 2080 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 A0A1B0GWB2 263 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 IGKV1-17P01599 117 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 IGLV1-47P01700 117 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 PATE2Q6UY27 113 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 CSTL1Q9H114 145 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 PLNP26678 52 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 MORN5Q5VZ52 161 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 RITA1Q96K30 269 aa12.1□□□□□ -0.47
PCDHA3-202ENST00000532566 CHD3Q12873 2000 aaKnown RBP12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 DLEU1O43261 78 aa12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 CGB3P0DN86 165 aa12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 CGB7P0DN87 165 aa12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 LCNL1Q6ZST4 164 aa12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 MAPK1IP1LQ8NDC0 245 aa12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 KLHL30-AS1Q8NEE0 82 aa12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 IGKV1OR2-108A0A075B7D4 117 aa12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 K7EIM0 57 aa12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 Q8NA96 180 aa12.09□□□□□ -0.47
PCDHA3-202ENST00000532566 INS-IGF2F8WCM5 200 aa12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 I3L2K1 104 aa12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 NCOR2Q9Y618 2525 aa12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 MRPL51Q4U2R6 128 aaKnown RBP12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 SPOCK3Q9BQ16 436 aa12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 MRPS16Q9Y3D3 137 aaKnown RBP12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 ZNF415Q09FC8 603 aa12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 VGLL1Q99990 258 aa12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 GP9P14770 177 aa12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 BCL6BQ8N143 479 aaPredicted RBP12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 TOMM7Q9P0U1 55 aa12.08□□□□□ -0.48
PCDHA3-202ENST00000532566 BRWD1-AS2P59051 145 aa12.07□□□□□ -0.48
PCDHA3-202ENST00000532566 FAM167A-AS1Q96KT0 104 aa12.07□□□□□ -0.48
PCDHA3-202ENST00000532566 CMC4P56277 68 aaPredicted RBP12.07□□□□□ -0.48
PCDHA3-202ENST00000532566 ADORA2A-AS1P86434 159 aa12.07□□□□□ -0.48
PCDHA3-202ENST00000532566 NPBQ8NG41 125 aa12.07□□□□□ -0.48
PCDHA3-202ENST00000532566 IGLC2P0DOY2 106 aa12.07□□□□□ -0.48
PCDHA3-202ENST00000532566 IGLC3P0DOY3 106 aa12.07□□□□□ -0.48
PCDHA3-202ENST00000532566 PRSS57Q6UWY2 283 aa12.07□□□□□ -0.48
PCDHA3-202ENST00000532566 WIPF2Q8TF74 440 aaPredicted RBP12.07□□□□□ -0.48
PCDHA3-202ENST00000532566 A0A087WWL8 130 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 IGFBPL1Q8WX77 278 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 IGHV1-24A0A0C4DH33 117 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 TRGV4A0A0C4DH28 118 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 CENPVL3A0A0U1RRI6 287 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 SAP30O75446 220 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 ZNF479Q96JC4 524 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 SNHG12Q9BXW3 62 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 IGLV2-23P01705 113 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 PCP4P48539 62 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 DEFB131AP59861 70 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 FBXL19-AS1Q494R0 122 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 ZNF295-AS1Q8N0V1 137 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 OR5A1Q8NGJ0 315 aa12.06□□□□□ -0.48
PCDHA3-202ENST00000532566 IGHV3-73A0A0B4J1V6 119 aa12.05□□□□□ -0.48
PCDHA3-202ENST00000532566 Q5PR19 223 aa12.05□□□□□ -0.48
PCDHA3-202ENST00000532566 SFTA2Q6UW10 78 aa12.05□□□□□ -0.48
PCDHA3-202ENST00000532566 IGHV7-81A0A0B4J1V7 117 aa12.05□□□□□ -0.48
PCDHA3-202ENST00000532566 IGKV3D-20A0A0C4DH25 116 aa12.05□□□□□ -0.48
PCDHA3-202ENST00000532566 E7EUB6 86 aa12.05□□□□□ -0.48
PCDHA3-202ENST00000532566 HOXA3O43365 443 aaPredicted RBP12.05□□□□□ -0.48
PCDHA3-202ENST00000532566 STPG4Q8N801 248 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms