RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 CARHSP1Q9Y2V2 147 aaKnown RBP12.29□□□□□ -0.44
PPFIA1-222ENST00000532504 THAP8Q8NA92 274 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 C8orf49Q96NF6 230 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 GAGE12BA1L429 117 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 ODF3BA8MYP8 253 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 GAGE7O76087 117 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 GAGE12FP0CL80 117 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 GAGE12GP0CL81 117 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 GAGE12IP0CL82 117 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 TMEM86BQ8N661 226 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 RPL36AP83881 106 aaKnown RBP12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 RPL36ALQ969Q0 106 aaKnown RBP12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 IGHV3-16A0A0C4DH30 117 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 HIST2H2BDQ6DRA6 164 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 TMEM70Q9BUB7 260 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 TMEM160Q9NX00 188 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 COL4A2P08572 1712 aa12.28□□□□□ -0.44
PPFIA1-222ENST00000532504 POLQO75417 2590 aa12.27□□□□□ -0.44
PPFIA1-222ENST00000532504 ARMS2P0C7Q2 107 aa12.27□□□□□ -0.44
PPFIA1-222ENST00000532504 CDKN1BP46527 198 aa12.27□□□□□ -0.44
PPFIA1-222ENST00000532504 MS4A6AQ9H2W1 248 aa12.27□□□□□ -0.44
PPFIA1-222ENST00000532504 I3L2K1 104 aa12.27□□□□□ -0.44
PPFIA1-222ENST00000532504 C2orf88Q9BSF0 95 aa12.27□□□□□ -0.44
PPFIA1-222ENST00000532504 CTSGP08311 255 aa12.27□□□□□ -0.45
PPFIA1-222ENST00000532504 LINC01551Q86U37 167 aa12.27□□□□□ -0.45
PPFIA1-222ENST00000532504 VGLL1Q99990 258 aa12.27□□□□□ -0.45
PPFIA1-222ENST00000532504 TNCP24821 2201 aa12.27□□□□□ -0.45
PPFIA1-222ENST00000532504 ARHGAP32A7KAX9 2087 aa12.27□□□□□ -0.45
PPFIA1-222ENST00000532504 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 PHLDA1Q8WV24 401 aaPredicted RBP12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 NDUFA3O95167 84 aa12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 AMBPP02760 352 aa12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 MALP21145 153 aa12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 TMEM190Q8WZ59 177 aa12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 TEX22C9J3V5 150 aa12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 CGB3P0DN86 165 aa12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 CGB7P0DN87 165 aa12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 PSMB2P49721 201 aa12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 ATRAIDQ6UW56 229 aa12.26□□□□□ -0.45
PPFIA1-222ENST00000532504 IGLV2-14P01704 120 aa12.25□□□□□ -0.45
PPFIA1-222ENST00000532504 ATOH7Q8N100 152 aa12.25□□□□□ -0.45
PPFIA1-222ENST00000532504 A0A0C4DFX4 3053 aa12.25□□□□□ -0.45
PPFIA1-222ENST00000532504 IGKV1-17P01599 117 aa12.25□□□□□ -0.45
PPFIA1-222ENST00000532504 TRBV12-3P01733 135 aa12.25□□□□□ -0.45
PPFIA1-222ENST00000532504 CRIP3Q6Q6R5 217 aa12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 FAM19A2Q8N3H0 131 aa12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 IFI27P40305 119 aaPredicted RBP12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 ZNF295-AS1Q8N0V1 137 aa12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 ATG2AQ2TAZ0 1938 aa12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 CHD9Q3L8U1 2897 aa12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 MYCNOSP40205 109 aa12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 MEGF9Q9H1U4 602 aa12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 IGHV1OR15-1A0A075B7D0 117 aa12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 VCX2Q9H322 139 aa12.24□□□□□ -0.45
PPFIA1-222ENST00000532504 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
PPFIA1-222ENST00000532504 ZNF414Q96IQ9 312 aa12.23□□□□□ -0.45
PPFIA1-222ENST00000532504 ADARB2-AS1A8MUL3 147 aa12.23□□□□□ -0.45
PPFIA1-222ENST00000532504 SPAG8Q99932 426 aaPredicted RBP12.23□□□□□ -0.45
PPFIA1-222ENST00000532504 PROP1O75360 226 aa12.23□□□□□ -0.45
PPFIA1-222ENST00000532504 PFN1P07737 140 aaKnown RBP12.23□□□□□ -0.45
PPFIA1-222ENST00000532504 VAMP3Q15836 100 aa12.23□□□□□ -0.45
PPFIA1-222ENST00000532504 CD300EQ496F6 205 aaPredicted RBP12.23□□□□□ -0.45
PPFIA1-222ENST00000532504 Q6ZPA2 131 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 A0A087WWC5 75 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 C2orf70A6NJV1 201 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 AZU1P20160 251 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 PSCAO43653 123 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 GCSHP23434 173 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 ZNF726P1Q15940 193 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 PIFOQ8TCI5 191 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 H7C2G1 150 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 FSTL3O95633 263 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 PRR20EP86478 221 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 PRR20CP86479 221 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 PRR20DP86480 221 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 PRR20BP86481 221 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 PRR20AP86496 221 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 ANXA2RQ3ZCQ2 193 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 C4orf3Q8WVX3 66 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 ATP6V0BQ99437 205 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 TMEM14CQ9P0S9 112 aa12.22□□□□□ -0.45
PPFIA1-222ENST00000532504 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 FAM90A2PQ658T7 463 aa12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 CFAP161Q6P656 301 aa12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 C1orf229Q6ZS94 237 aaPredicted RBP12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 Q6ZSV7 163 aa12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 GAGE12JA6NER3 117 aa12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 GAGE1Q13065 139 aa12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 GAGE4Q13068 117 aa12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 GAGE5Q13069 117 aa12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 GAGE13Q4V321 117 aa12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 ZNF114Q8NC26 417 aa12.21□□□□□ -0.45
PPFIA1-222ENST00000532504 TMEM75Q8N9X5 138 aa12.21□□□□□ -0.46
PPFIA1-222ENST00000532504 FXYD5Q96DB9 178 aa12.21□□□□□ -0.46
PPFIA1-222ENST00000532504 PRR25Q96S07 402 aa12.21□□□□□ -0.46
PPFIA1-222ENST00000532504 D6R8Y8 96 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 PPBPP02775 128 aa12.2□□□□□ -0.46
PPFIA1-222ENST00000532504 SRSF1Q07955 248 aaKnown RBP eCLIP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms