RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 IGKV3-20P01619 116 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 IL4P05112 153 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 STAG3L2P0CL84 134 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 STAG3L3P0CL85 134 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 CCL20P78556 96 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 S100A7AQ86SG5 101 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 NIPSNAP3BQ9BS92 247 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 SEPSECSQ9HD40 501 aaKnown RBP12.32□□□□□ -0.44
PKP3-208ENST00000531857 RFNGQ9Y644 331 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 PDE6DO43924 150 aa12.31□□□□□ -0.44
PKP3-208ENST00000531857 MEF2BQ02080 365 aaPredicted RBP12.31□□□□□ -0.44
PKP3-208ENST00000531857 BTN1A1Q13410 526 aa12.31□□□□□ -0.44
PKP3-208ENST00000531857 SIGLEC15Q6ZMC9 328 aa12.31□□□□□ -0.44
PKP3-208ENST00000531857 SMCO4Q9NRQ5 59 aa12.31□□□□□ -0.44
PKP3-208ENST00000531857 TMEM167BQ9NRX6 74 aa12.31□□□□□ -0.44
PKP3-208ENST00000531857 DKK2Q9UBU2 259 aa12.31□□□□□ -0.44
PKP3-208ENST00000531857 TMEM189A5PLL7 270 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 SMIM9A6NGZ8 99 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 F6UZH7 168 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 FAM222AQ5U5X8 452 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 MIC13Q5XKP0 118 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 PQLC2Q6ZP29 291 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 CYP2G1PQ6ZSU1 146 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 RXFP4Q8TDU9 374 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 TRGV9Q99603 122 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 SLC25A22Q9H936 323 aa12.3□□□□□ -0.44
PKP3-208ENST00000531857 ZFP92A6NM28 416 aa12.29□□□□□ -0.44
PKP3-208ENST00000531857 C9JQL5 133 aa12.29□□□□□ -0.44
PKP3-208ENST00000531857 HTN3P15516 51 aa12.29□□□□□ -0.44
PKP3-208ENST00000531857 NPIPB3Q92617 1050 aa12.29□□□□□ -0.44
PKP3-208ENST00000531857 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
PKP3-208ENST00000531857 FAM210BQ96KR6 192 aa12.29□□□□□ -0.44
PKP3-208ENST00000531857 RNF24Q9Y225 148 aa12.29□□□□□ -0.44
PKP3-208ENST00000531857 FUT9Q9Y231 359 aa12.29□□□□□ -0.44
PKP3-208ENST00000531857 A0A087WWC5 75 aa12.28□□□□□ -0.44
PKP3-208ENST00000531857 A0A1B0GV50 99 aa12.28□□□□□ -0.44
PKP3-208ENST00000531857 TOMM40O96008 361 aa12.28□□□□□ -0.44
PKP3-208ENST00000531857 LINC00869P0C866 280 aa12.28□□□□□ -0.44
PKP3-208ENST00000531857 RD3LP0DJH9 198 aa12.28□□□□□ -0.44
PKP3-208ENST00000531857 S100A7P31151 101 aa12.28□□□□□ -0.44
PKP3-208ENST00000531857 RNF212Q495C1 297 aa12.28□□□□□ -0.44
PKP3-208ENST00000531857 C1orf134Q5TEV5 83 aa12.28□□□□□ -0.44
PKP3-208ENST00000531857 OR51G1Q8NGK1 321 aa12.28□□□□□ -0.44
PKP3-208ENST00000531857 SAV1Q9H4B6 383 aaPredicted RBP12.28□□□□□ -0.44
PKP3-208ENST00000531857 OR5G3P0C626 314 aa12.27□□□□□ -0.45
PKP3-208ENST00000531857 PSG1P11464 419 aa12.27□□□□□ -0.45
PKP3-208ENST00000531857 FGF8P55075 233 aaPredicted RBP12.27□□□□□ -0.45
PKP3-208ENST00000531857 ACY3Q96HD9 319 aa12.27□□□□□ -0.45
PKP3-208ENST00000531857 DNAJC4Q9NNZ3 241 aa12.27□□□□□ -0.45
PKP3-208ENST00000531857 HSPG2P98160 4391 aa12.27□□□□□ -0.45
PKP3-208ENST00000531857 M0R036 132 aa12.26□□□□□ -0.45
PKP3-208ENST00000531857 SCO1O75880 301 aa12.26□□□□□ -0.45
PKP3-208ENST00000531857 TMEM88Q6PEY1 159 aa12.26□□□□□ -0.45
PKP3-208ENST00000531857 UHRF2Q96PU4 802 aa12.26□□□□□ -0.45
PKP3-208ENST00000531857 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
PKP3-208ENST00000531857 TMEM242Q9NWH2 141 aa12.26□□□□□ -0.45
PKP3-208ENST00000531857 H3BQ15 152 aa12.25□□□□□ -0.45
PKP3-208ENST00000531857 PLP1P60201 277 aa12.25□□□□□ -0.45
PKP3-208ENST00000531857 ATRAIDQ6UW56 229 aa12.25□□□□□ -0.45
PKP3-208ENST00000531857 SSX7Q7RTT5 188 aa12.25□□□□□ -0.45
PKP3-208ENST00000531857 C1orf158Q8N1D5 194 aa12.25□□□□□ -0.45
PKP3-208ENST00000531857 C15orf54Q8N8G6 183 aa12.25□□□□□ -0.45
PKP3-208ENST00000531857 CYB561D1Q8N8Q1 229 aa12.25□□□□□ -0.45
PKP3-208ENST00000531857 OR4B1Q8NGF8 309 aa12.25□□□□□ -0.45
PKP3-208ENST00000531857 RPUSD4Q96CM3 377 aaKnown RBP12.25□□□□□ -0.45
PKP3-208ENST00000531857 CTDSP1Q9GZU7 261 aa12.25□□□□□ -0.45
PKP3-208ENST00000531857 YTHDF2Q9Y5A9 579 aaKnown RBP12.25□□□□□ -0.45
PKP3-208ENST00000531857 TEX48A0A1B0GUV7 120 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 C7orf77A4D0Y5 90 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 F6UB75 175 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 SOCS3O14543 225 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 GCHFRP30047 84 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 TNP2Q05952 138 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 FAM78BQ5VT40 261 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 FOXI2Q6ZQN5 318 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 RNF125Q96EQ8 232 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 CLUHP3Q96NS8 147 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 RPS10P5Q9NQ39 176 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 NAT8Q9UHE5 227 aa12.24□□□□□ -0.45
PKP3-208ENST00000531857 ZNF727A8MUV8 499 aa12.23□□□□□ -0.45
PKP3-208ENST00000531857 COX7A2P2O60397 106 aa12.23□□□□□ -0.45
PKP3-208ENST00000531857 TMEM241Q24JQ0 296 aa12.23□□□□□ -0.45
PKP3-208ENST00000531857 C10orf113Q5VZT2 155 aa12.23□□□□□ -0.45
PKP3-208ENST00000531857 IQCF2Q8IXL9 164 aa12.23□□□□□ -0.45
PKP3-208ENST00000531857 IGKV1OR2-108A0A075B7D4 117 aa12.22□□□□□ -0.45
PKP3-208ENST00000531857 A0A1W2PRE2 83 aa12.22□□□□□ -0.45
PKP3-208ENST00000531857 C16orf90A8MZG2 172 aa12.22□□□□□ -0.45
PKP3-208ENST00000531857 PAGE4O60829 102 aa12.22□□□□□ -0.45
PKP3-208ENST00000531857 ARL14EPLP0DKL9 152 aa12.22□□□□□ -0.45
PKP3-208ENST00000531857 PSG9Q00887 426 aa12.22□□□□□ -0.45
PKP3-208ENST00000531857 DOK5Q9P104 306 aa12.22□□□□□ -0.45
PKP3-208ENST00000531857 GOLT1BQ9Y3E0 138 aa12.22□□□□□ -0.45
PKP3-208ENST00000531857 HMGB3O15347 200 aaKnown RBP12.21□□□□□ -0.45
PKP3-208ENST00000531857 ID1P41134 155 aa12.21□□□□□ -0.45
PKP3-208ENST00000531857 ZNF90Q03938 601 aa12.21□□□□□ -0.45
PKP3-208ENST00000531857 SMIM7Q9BQ49 75 aa12.21□□□□□ -0.45
PKP3-208ENST00000531857 SDF2L1Q9HCN8 221 aa12.21□□□□□ -0.45
PKP3-208ENST00000531857 IGKV1D-37A0A075B6S9 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms