RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 RBMY1A1P0DJD3 496 aaKnown RBP12.9□□□□□ -0.34
PTPN11-204ENST00000531326 RBMY1CP0DJD4 496 aa12.9□□□□□ -0.34
PTPN11-204ENST00000531326 HIST1H1AQ02539 215 aaPredicted RBP12.9□□□□□ -0.34
PTPN11-204ENST00000531326 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
PTPN11-204ENST00000531326 EIF5AL1Q6IS14 154 aaKnown RBP12.9□□□□□ -0.34
PTPN11-204ENST00000531326 AMTNQ6UX39 209 aa12.9□□□□□ -0.34
PTPN11-204ENST00000531326 TMEM167BQ9NRX6 74 aa12.9□□□□□ -0.34
PTPN11-204ENST00000531326 BOLA2-SMG1P6H3BVE0 249 aa12.89□□□□□ -0.35
PTPN11-204ENST00000531326 TCTAP57738 103 aa12.89□□□□□ -0.35
PTPN11-204ENST00000531326 MBD3L1Q8WWY6 194 aa12.89□□□□□ -0.35
PTPN11-204ENST00000531326 TMPRSS5Q9H3S3 457 aa12.89□□□□□ -0.35
PTPN11-204ENST00000531326 OTORQ9NRC9 128 aa12.89□□□□□ -0.35
PTPN11-204ENST00000531326 IGHV4-28A0A0C4DH34 117 aa12.88□□□□□ -0.35
PTPN11-204ENST00000531326 IGLL5B9A064 214 aa12.88□□□□□ -0.35
PTPN11-204ENST00000531326 SULT1A2P50226 295 aa12.88□□□□□ -0.35
PTPN11-204ENST00000531326 SLC35B3Q9H1N7 401 aa12.88□□□□□ -0.35
PTPN11-204ENST00000531326 PCLOQ9Y6V0 5065 aa12.88□□□□□ -0.35
PTPN11-204ENST00000531326 NPIPB6E9PJ23 425 aa12.87□□□□□ -0.35
PTPN11-204ENST00000531326 RAB5CP51148 216 aa12.87□□□□□ -0.35
PTPN11-204ENST00000531326 FXYD7P58549 80 aa12.87□□□□□ -0.35
PTPN11-204ENST00000531326 NUTF2P61970 127 aaKnown RBP12.87□□□□□ -0.35
PTPN11-204ENST00000531326 IQCF2Q8IXL9 164 aa12.87□□□□□ -0.35
PTPN11-204ENST00000531326 CSNK1G2-AS1Q8NCQ2 148 aa12.87□□□□□ -0.35
PTPN11-204ENST00000531326 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
PTPN11-204ENST00000531326 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
PTPN11-204ENST00000531326 PGPA6NDG6 321 aa12.86□□□□□ -0.35
PTPN11-204ENST00000531326 C11orf94C9JXX5 98 aa12.86□□□□□ -0.35
PTPN11-204ENST00000531326 FAM74A1Q5RGS3 127 aa12.86□□□□□ -0.35
PTPN11-204ENST00000531326 X6R8D5 127 aa12.86□□□□□ -0.35
PTPN11-204ENST00000531326 IGKV2-40A0A087WW87 121 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-204ENST00000531326 ZNF705EA8MWA4 302 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-204ENST00000531326 GGTLC3B5MD39 225 aa12.85□□□□□ -0.35
PTPN11-204ENST00000531326 IGKV2D-40P01614 121 aaPredicted RBP12.85□□□□□ -0.35
PTPN11-204ENST00000531326 H2AFB1P0C5Y9 115 aa12.85□□□□□ -0.35
PTPN11-204ENST00000531326 Q6ZTC4 211 aa12.85□□□□□ -0.35
PTPN11-204ENST00000531326 XCL2Q9UBD3 114 aa12.85□□□□□ -0.35
PTPN11-204ENST00000531326 YTHDF2Q9Y5A9 579 aaKnown RBP12.85□□□□□ -0.35
PTPN11-204ENST00000531326 A0A1B0GV50 99 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 A0A1W2PRE2 83 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 DIRC3C9JPN6 131 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 CT45A10P0DMU9 189 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 MIFP14174 115 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 CSN1S1P47710 185 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 ERCC8Q13216 396 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 ALKAL2Q6UX46 152 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 C9orf47Q6ZRZ4 202 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 RXFP4Q8TDU9 374 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 FAT2Q9NYQ8 4349 aa12.84□□□□□ -0.35
PTPN11-204ENST00000531326 M0R2Z0 102 aa12.83□□□□□ -0.36
PTPN11-204ENST00000531326 UBE2G2P60604 165 aa12.83□□□□□ -0.36
PTPN11-204ENST00000531326 SPINK13Q1W4C9 94 aa12.83□□□□□ -0.36
PTPN11-204ENST00000531326 ARL6IP6Q8N6S5 226 aa12.83□□□□□ -0.36
PTPN11-204ENST00000531326 VGLL1Q99990 258 aa12.83□□□□□ -0.36
PTPN11-204ENST00000531326 C1QTNF4Q9BXJ3 329 aa12.83□□□□□ -0.36
PTPN11-204ENST00000531326 AGPAT4-IT1Q9H0P7 198 aa12.83□□□□□ -0.36
PTPN11-204ENST00000531326 DNAH2Q9P225 4427 aa12.82□□□□□ -0.36
PTPN11-204ENST00000531326 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
PTPN11-204ENST00000531326 RBAKDNA6NC62 111 aa12.82□□□□□ -0.36
PTPN11-204ENST00000531326 FAM74A7A6NL05 159 aa12.82□□□□□ -0.36
PTPN11-204ENST00000531326 CRXO43186 299 aaPredicted RBP12.82□□□□□ -0.36
PTPN11-204ENST00000531326 SUMO1P63165 101 aaKnown RBP12.82□□□□□ -0.36
PTPN11-204ENST00000531326 GNG5P63218 68 aa12.82□□□□□ -0.36
PTPN11-204ENST00000531326 CMTM2Q8TAZ6 248 aa12.82□□□□□ -0.36
PTPN11-204ENST00000531326 FAM19A4Q96LR4 140 aa12.82□□□□□ -0.36
PTPN11-204ENST00000531326 LINC00477Q96M19 166 aa12.82□□□□□ -0.36
PTPN11-204ENST00000531326 ODF3Q96PU9 254 aa12.82□□□□□ -0.36
PTPN11-204ENST00000531326 IGHV4-4A0A075B6R2 117 aa12.81□□□□□ -0.36
PTPN11-204ENST00000531326 TRAV10A0A0B4J240 114 aa12.81□□□□□ -0.36
PTPN11-204ENST00000531326 SLC25A5P05141 298 aaKnown RBP12.81□□□□□ -0.36
PTPN11-204ENST00000531326 CCL20P78556 96 aa12.81□□□□□ -0.36
PTPN11-204ENST00000531326 C5orf17Q8NAS9 161 aa12.81□□□□□ -0.36
PTPN11-204ENST00000531326 PPP1R14DQ9NXH3 145 aa12.81□□□□□ -0.36
PTPN11-204ENST00000531326 RPH3ALQ9UNE2 315 aa12.81□□□□□ -0.36
PTPN11-204ENST00000531326 CELA1Q9UNI1 258 aa12.81□□□□□ -0.36
PTPN11-204ENST00000531326 TRAV12-2A0A075B6T6 113 aa12.8□□□□□ -0.36
PTPN11-204ENST00000531326 AMBPP02760 352 aa12.8□□□□□ -0.36
PTPN11-204ENST00000531326 KIR3DS1Q14943 382 aa12.8□□□□□ -0.36
PTPN11-204ENST00000531326 GOLT1AQ6ZVE7 132 aa12.8□□□□□ -0.36
PTPN11-204ENST00000531326 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
PTPN11-204ENST00000531326 IGF2BP2-AS1Q96M15 143 aa12.8□□□□□ -0.36
PTPN11-204ENST00000531326 EPDR1Q9UM22 224 aa12.8□□□□□ -0.36
PTPN11-204ENST00000531326 ARL2-SNX15V9GYD0 113 aa12.8□□□□□ -0.36
PTPN11-204ENST00000531326 TCRAP04437 139 aa12.79□□□□□ -0.36
PTPN11-204ENST00000531326 CDKN1BP46527 198 aa12.79□□□□□ -0.36
PTPN11-204ENST00000531326 TMEM78Q5T7P6 136 aa12.79□□□□□ -0.36
PTPN11-204ENST00000531326 ZNF705AQ6ZN79 300 aaPredicted RBP12.79□□□□□ -0.36
PTPN11-204ENST00000531326 ZNF492Q9P255 531 aa12.79□□□□□ -0.36
PTPN11-204ENST00000531326 DNAH17Q9UFH2 4485 aa12.79□□□□□ -0.36
PTPN11-204ENST00000531326 PKHD1P08F94 4074 aa12.79□□□□□ -0.36
PTPN11-204ENST00000531326 PAGE4O60829 102 aa12.78□□□□□ -0.36
PTPN11-204ENST00000531326 LEPP41159 167 aa12.78□□□□□ -0.36
PTPN11-204ENST00000531326 ZNF138P52744 262 aa12.78□□□□□ -0.36
PTPN11-204ENST00000531326 C12orf74Q32Q52 190 aa12.78□□□□□ -0.36
PTPN11-204ENST00000531326 ZNF767PQ75MW2 155 aa12.78□□□□□ -0.36
PTPN11-204ENST00000531326 CCDC28AQ8IWP9 274 aa12.78□□□□□ -0.36
PTPN11-204ENST00000531326 Q8TAT8 98 aa12.78□□□□□ -0.36
PTPN11-204ENST00000531326 NKX6-2Q9C056 277 aaPredicted RBP12.78□□□□□ -0.36
PTPN11-204ENST00000531326 TRAV8-1A0A0A6YYK1 113 aa12.77□□□□□ -0.37
PTPN11-204ENST00000531326 INSP01308 110 aa12.77□□□□□ -0.37
PTPN11-204ENST00000531326 HBE1P02100 147 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms