RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 RNF183Q96D59 192 aa8.11□□□□□ -1.11
CAPN1-221ENST00000531068 ZNF503Q96F45 646 aa8.11□□□□□ -1.11
CAPN1-221ENST00000531068 DNAJC4Q9NNZ3 241 aa8.11□□□□□ -1.11
CAPN1-221ENST00000531068 U3KQE9 123 aa8.11□□□□□ -1.11
CAPN1-221ENST00000531068 NBEAL2Q6ZNJ1 2754 aa8.11□□□□□ -1.11
CAPN1-221ENST00000531068 KMT2CQ8NEZ4 4911 aaKnown RBP8.1□□□□□ -1.11
CAPN1-221ENST00000531068 TGIF2-C20orf24A0A0A6YYL0 155 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 HMGB3O15347 200 aaKnown RBP8.1□□□□□ -1.11
CAPN1-221ENST00000531068 EIF3GO75821 320 aaKnown RBP eCLIP8.1□□□□□ -1.11
CAPN1-221ENST00000531068 NDUFB4O95168 129 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 IL4P05112 153 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 S100A9P06702 114 aaKnown RBP8.1□□□□□ -1.11
CAPN1-221ENST00000531068 OR10J4P0C629 311 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 GALR1P47211 349 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 DEFB131AP59861 70 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 FABP9Q0Z7S8 132 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 ZNF674Q2M3X9 581 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 DEFB135Q30KP9 77 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 FAM78BQ5VT40 261 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 ZFP82Q8N141 532 aa8.1□□□□□ -1.11
CAPN1-221ENST00000531068 K7EQG2 157 aa8.09□□□□□ -1.11
CAPN1-221ENST00000531068 ATP5G3P48201 142 aa8.09□□□□□ -1.11
CAPN1-221ENST00000531068 AKR1D1P51857 326 aa8.09□□□□□ -1.11
CAPN1-221ENST00000531068 TAS2R60P59551 318 aa8.09□□□□□ -1.11
CAPN1-221ENST00000531068 C16orf54Q6UWD8 224 aa8.09□□□□□ -1.11
CAPN1-221ENST00000531068 MIR17HGQ75NE6 70 aa8.09□□□□□ -1.11
CAPN1-221ENST00000531068 STHQ8IWL8 128 aa8.09□□□□□ -1.11
CAPN1-221ENST00000531068 IQCF2Q8IXL9 164 aa8.09□□□□□ -1.11
CAPN1-221ENST00000531068 LCE6AA0A183 80 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 MRPS12O15235 138 aaKnown RBP8.08□□□□□ -1.12
CAPN1-221ENST00000531068 BUB3O43684 328 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST1H2BKO60814 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HYPMO75409 117 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST1H2BJP06899 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST1H2BOP23527 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST1H2BBP33778 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST1H2BDP58876 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 SNRPD3P62318 126 aaKnown RBP8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST1H2BCP62807 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 RPL19P84098 196 aaKnown RBP8.08□□□□□ -1.12
CAPN1-221ENST00000531068 USF2Q15853 346 aaPredicted RBP8.08□□□□□ -1.12
CAPN1-221ENST00000531068 ZNF124Q15973 351 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST2H2BEQ16778 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.08□□□□□ -1.12
CAPN1-221ENST00000531068 LEMD1Q68G75 181 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 GLMPQ8WWB7 406 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST1H2BHQ93079 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 SMIM12Q96EX1 92 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 SFRP2Q96HF1 295 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 C12orf57Q99622 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST1H2BNQ99877 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 HIST1H2BMQ99879 126 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 YTHDF2Q9Y5A9 579 aaKnown RBP8.08□□□□□ -1.12
CAPN1-221ENST00000531068 URGCP-MRPS24S4R325 110 aa8.08□□□□□ -1.12
CAPN1-221ENST00000531068 TRAV5A0A0B4J249 113 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 A0A0J9YWU9 116 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 H3BRN7 92 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 TRGC2P03986 189 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 ZNF688P0C7X2 276 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 RPL35P42766 123 aaKnown RBP8.07□□□□□ -1.12
CAPN1-221ENST00000531068 COX19Q49B96 90 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 C1orf194Q5T5A4 169 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 DCANP1Q8TF63 244 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 RNF125Q96EQ8 232 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 C17orf77Q96MU5 243 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 SHANK2-AS3Q9BTD1 123 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 SLC25A2Q9BXI2 301 aa8.07□□□□□ -1.12
CAPN1-221ENST00000531068 COX7A2P2O60397 106 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 CA1P00915 261 aaPredicted RBP8.06□□□□□ -1.12
CAPN1-221ENST00000531068 S100A7P31151 101 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 UBE2G2P60604 165 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 C10orf113Q5VZT2 155 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 MORN3Q6PF18 240 aaPredicted RBP8.06□□□□□ -1.12
CAPN1-221ENST00000531068 SIGLEC15Q6ZMC9 328 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 S100A7AQ86SG5 101 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 OR10G8Q8NGN5 311 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 OCC1Q8TAD7 63 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 SLC25A39Q9BZJ4 359 aaPredicted RBP8.06□□□□□ -1.12
CAPN1-221ENST00000531068 NRN1Q9NPD7 142 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 OSTCQ9NRP0 149 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 RNF24Q9Y225 148 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 DNAH7Q8WXX0 4024 aa8.06□□□□□ -1.12
CAPN1-221ENST00000531068 TRBV20OR9-2A0A075B6H5 130 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 SCO2A0A1W2PP80 73 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 ISLRO14498 428 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 GCGP01275 180 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 TRGC1P0CF51 173 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 ORM2P19652 201 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 LYZP61626 148 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 NUTF2P61970 127 aaKnown RBP8.05□□□□□ -1.12
CAPN1-221ENST00000531068 PSMG4Q5JS54 123 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 ACTL10Q5JWF8 245 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 LINC00305Q7Z4B0 112 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 OR1B1Q8NGR6 318 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 OR11H2Q8NH07 326 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 FRZBQ92765 325 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 FXYD5Q96DB9 178 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 OR51M1Q9H341 326 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 TMEM14CQ9P0S9 112 aa8.05□□□□□ -1.12
CAPN1-221ENST00000531068 HIGD1AQ9Y241 93 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms