RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CEACAM4O75871 244 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 LINC00694P0DN24 101 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 ALKBH6Q3KRA9 238 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 Q8N1Y9 231 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 C10orf126Q8N4M7 172 aa6.36□□□□□ -1.39
CSDE1-214ENST00000530886 TRAV8-4A0A0B4J246 113 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 K7EM74 188 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 TNFRSF6BO95407 300 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 PLAUP00749 431 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 HLA-DMBP28068 263 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 DEFB121Q5J5C9 76 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 Q6ZS52 159 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 FAM57AQ8TBR7 257 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 LINC00574Q9H8X3 128 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 FZR1Q9UM11 496 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 RAXQ9Y2V3 346 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 KNTC1P50748 2209 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 NDUFA7O95182 113 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 SAA1P0DJI8 122 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-214ENST00000530886 RUSC1-AS1Q66K80 236 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 AAMDCQ9H7C9 122 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 SMKR1H3BMG3 65 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 PRDX2P32119 198 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 TNFAIP6P98066 277 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-214ENST00000530886 EBI3Q14213 229 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 C17orf58Q2M2W7 97 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 MRPL36Q9P0J6 103 aaKnown RBP6.35□□□□□ -1.39
CSDE1-214ENST00000530886 CACNA1DQ01668 2161 aa6.35□□□□□ -1.39
CSDE1-214ENST00000530886 CGB1A6NKQ9 187 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 LGALS9O00182 355 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 TIMM23O14925 209 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 SCRG1O75711 98 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 ATP5G1P05496 136 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 SLC25A16P16260 332 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 ORM2P19652 201 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 CD40P25942 277 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 Q0VFX4 171 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 TMEM167AQ8TBQ9 72 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 FAM173AQ9BQD7 235 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 SSUH2Q9Y2M2 353 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 TRBV19A0A075B6N1 114 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 WT1-ASQ06250 92 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 C3orf22Q8N5N4 141 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 TIMD4Q96H15 378 aa6.34□□□□□ -1.39
CSDE1-214ENST00000530886 TRAV2A0A0B4J234 112 aa6.34□□□□□ -1.4
CSDE1-214ENST00000530886 A4D1N5 150 aa6.34□□□□□ -1.4
CSDE1-214ENST00000530886 C9JAW5 83 aa6.34□□□□□ -1.4
CSDE1-214ENST00000530886 TEX36Q5VZQ5 186 aa6.34□□□□□ -1.4
CSDE1-214ENST00000530886 SIGLEC15Q6ZMC9 328 aa6.34□□□□□ -1.4
CSDE1-214ENST00000530886 ZNF826PQ6ZT77 177 aa6.34□□□□□ -1.4
CSDE1-214ENST00000530886 HIGD1AQ9Y241 93 aa6.34□□□□□ -1.4
CSDE1-214ENST00000530886 DOCK7Q96N67 2140 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 H3BVH4 76 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 NPFFO15130 113 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 CFC1BP0CG36 223 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 CFC1P0CG37 223 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 LAGE3Q14657 143 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 FAM19A5Q7Z5A7 132 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-214ENST00000530886 MDP1Q86V88 176 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 TMEM219Q86XT9 240 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 POM121L12Q8N7R1 296 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 OR13C6PQ8NH95 151 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 LINC00526Q96FQ7 95 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 TPPP3Q9BW30 176 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 SH2D1AO60880 128 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 IGKV1-16P04430 117 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 RPL7P18124 248 aaKnown RBP6.33□□□□□ -1.4
CSDE1-214ENST00000530886 FOXC1Q12948 553 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 C6orf15Q6UXA7 325 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-214ENST00000530886 EXOC3-AS1Q8N2X6 119 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 TMSB15BA0A087X1C1 80 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 IGHV5-10-1A0A0J9YXX1 117 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 UQCRQO14949 82 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 IGHV3-13P01766 116 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 ZNF833PQ6ZTB9 187 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 ZNRF2Q8NHG8 242 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 TMEM101Q96IK0 257 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 PRADC1Q9BSG0 188 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
CSDE1-214ENST00000530886 IGKV1D-17A0A075B6S4 117 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 E7EUB6 86 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 IGHV3-30P01768 117 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 IGHV3-30-5P0DP03 117 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 EDDM3AQ14507 147 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 MRGPRG-AS1Q2M3A8 158 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 NEXN-AS1Q8NBZ9 246 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 GON4LQ3T8J9 2241 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 NDUFA3O95167 84 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 GLRXP35754 106 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 ZNF672Q499Z4 452 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-214ENST00000530886 IL17RELQ6ZVW7 336 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 PRR25Q96S07 402 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 CHCHD5Q9BSY4 110 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 ONECUT1Q9UBC0 465 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 NAV3Q8IVL0 2385 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 BOD1L1Q8NFC6 3051 aa6.32□□□□□ -1.4
CSDE1-214ENST00000530886 TRBV10-2A0A0K0K1G8 114 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 CECR9P0C854 216 aa6.31□□□□□ -1.4
CSDE1-214ENST00000530886 PLGLAQ15195 96 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms