RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 BLCAPP62952 87 aa2.3□□□□□ -2.04
CAPRIN1-208ENST00000530008 PSPHP78330 225 aa2.3□□□□□ -2.04
CAPRIN1-208ENST00000530008 SPRNQ5BIV9 151 aa2.3□□□□□ -2.04
CAPRIN1-208ENST00000530008 FAM19A2Q8N3H0 131 aa2.3□□□□□ -2.04
CAPRIN1-208ENST00000530008 OBSCN-AS1Q96MR7 158 aa2.3□□□□□ -2.04
CAPRIN1-208ENST00000530008 CALML5Q9NZT1 146 aa2.3□□□□□ -2.04
CAPRIN1-208ENST00000530008 HSPB8Q9UJY1 196 aa2.3□□□□□ -2.04
CAPRIN1-208ENST00000530008 ALPK2Q86TB3 2170 aa2.3□□□□□ -2.04
CAPRIN1-208ENST00000530008 CECR2Q9BXF3 1484 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 A0A096LPI6 279 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 C3orf85A0A1B0GTC6 90 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 TCRAP04437 139 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 SLC25A4P12235 298 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 HSD17B12Q53GQ0 312 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 GDF5OSQ5U4N7 250 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 GLIPR1L1Q6UWM5 242 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 AP1S3Q96PC3 154 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 TMEM138Q9NPI0 162 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 MED12LQ86YW9 2145 aa2.29□□□□□ -2.04
CAPRIN1-208ENST00000530008 COL24A1Q17RW2 1714 aa2.28□□□□□ -2.04
CAPRIN1-208ENST00000530008 LYNX1P0DP58 116 aa2.28□□□□□ -2.04
CAPRIN1-208ENST00000530008 S100A12P80511 92 aa2.28□□□□□ -2.04
CAPRIN1-208ENST00000530008 ZCCHC23Q6ZST2 131 aa2.28□□□□□ -2.04
CAPRIN1-208ENST00000530008 TMEM14CQ9P0S9 112 aa2.28□□□□□ -2.04
CAPRIN1-208ENST00000530008 CCL4P13236 92 aa2.27□□□□□ -2.05
CAPRIN1-208ENST00000530008 KRTAP21-3Q3LHN1 58 aa2.27□□□□□ -2.05
CAPRIN1-208ENST00000530008 CASC2Q6XLA1 102 aa2.27□□□□□ -2.05
CAPRIN1-208ENST00000530008 Q6ZSA8 131 aa2.27□□□□□ -2.05
CAPRIN1-208ENST00000530008 MYOFQ9NZM1 2061 aa2.26□□□□□ -2.05
CAPRIN1-208ENST00000530008 LINC00322Q6ZN03 302 aaPredicted RBP2.26□□□□□ -2.05
CAPRIN1-208ENST00000530008 LINC00526Q96FQ7 95 aa2.26□□□□□ -2.05
CAPRIN1-208ENST00000530008 MRPL57Q9BQC6 102 aaKnown RBP2.26□□□□□ -2.05
CAPRIN1-208ENST00000530008 SORL1Q92673 2214 aa2.26□□□□□ -2.05
CAPRIN1-208ENST00000530008 SDK1Q7Z5N4 2213 aa2.25□□□□□ -2.05
CAPRIN1-208ENST00000530008 CEP192Q8TEP8 1941 aa2.25□□□□□ -2.05
CAPRIN1-208ENST00000530008 OR4S1Q8NGB4 309 aa2.25□□□□□ -2.05
CAPRIN1-208ENST00000530008 BANF2Q9H503 90 aa2.25□□□□□ -2.05
CAPRIN1-208ENST00000530008 FER1L6Q2WGJ9 1857 aa2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 XIRP1Q702N8 1843 aaKnown RBP2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 LOC107984156A0A0G2JMH3 177 aa2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 KLF7O75840 302 aaPredicted RBP2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 IGHV3-33P01772 117 aa2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 QRFPP83859 136 aa2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 ARL17AQ8IVW1 177 aa2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 MAGOHBQ96A72 148 aaKnown RBP2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 CIB3Q96Q77 187 aaPredicted RBP2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 MPC1Q9Y5U8 109 aa2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 MYLKQ15746 1914 aa2.24□□□□□ -2.05
CAPRIN1-208ENST00000530008 CEP152O94986 1710 aa2.23□□□□□ -2.05
CAPRIN1-208ENST00000530008 ZNF727A8MUV8 499 aa2.23□□□□□ -2.05
CAPRIN1-208ENST00000530008 ETV6P41212 452 aa2.23□□□□□ -2.05
CAPRIN1-208ENST00000530008 SMIM21Q3B7S5 101 aa2.23□□□□□ -2.05
CAPRIN1-208ENST00000530008 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
CAPRIN1-208ENST00000530008 SMIM24O75264 130 aa2.22□□□□□ -2.05
CAPRIN1-208ENST00000530008 HIST1H1AQ02539 215 aaPredicted RBP2.22□□□□□ -2.05
CAPRIN1-208ENST00000530008 TMEM91Q6ZNR0 172 aa2.22□□□□□ -2.05
CAPRIN1-208ENST00000530008 DIDO1Q9BTC0 2240 aaKnown RBP2.22□□□□□ -2.05
CAPRIN1-208ENST00000530008 TNRC6BQ9UPQ9 1833 aaKnown RBP2.21□□□□□ -2.05
CAPRIN1-208ENST00000530008 COL1A1P02452 1464 aaPredicted RBP2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 IGLV3-32A0A0A0MS00 114 aa2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 PPYP01298 95 aa2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 ANGP03950 147 aaKnown RBP2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 CD14P08571 375 aa2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 HIST1H1BP16401 226 aaKnown RBP2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 PCBD1P61457 104 aa2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 SNRPD3P62318 126 aaKnown RBP2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 NEDD8Q15843 81 aa2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 DEFB115Q30KQ5 88 aa2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 OTOSQ8NHW6 89 aa2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 TNFSF18Q9UNG2 199 aa2.21□□□□□ -2.06
CAPRIN1-208ENST00000530008 ARFGEF3Q5TH69 2177 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 INTS1Q8N201 2190 aaKnown RBP2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 FGD6Q6ZV73 1430 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 JMJD7-PLA2G4BH0Y9G9 81 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 HLA-DRB4P13762 266 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 CKS2P33552 79 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 ASB16-AS1Q495Z4 193 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 C5orf17Q8NAS9 161 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 ODF3Q96PU9 254 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 COPZ2Q9P299 210 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 HLA-DRB4X5D2U9 266 aa2.2□□□□□ -2.06
CAPRIN1-208ENST00000530008 EDF1O60869 148 aaKnown RBP2.19□□□□□ -2.06
CAPRIN1-208ENST00000530008 MPC1LP0DKB6 136 aa2.19□□□□□ -2.06
CAPRIN1-208ENST00000530008 AKR1D1P51857 326 aa2.19□□□□□ -2.06
CAPRIN1-208ENST00000530008 CCSMST1Q4G0I0 132 aa2.19□□□□□ -2.06
CAPRIN1-208ENST00000530008 IZUMO2Q6UXV1 221 aa2.19□□□□□ -2.06
CAPRIN1-208ENST00000530008 SMIM3Q9BZL3 60 aa2.19□□□□□ -2.06
CAPRIN1-208ENST00000530008 METTL1Q9UBP6 276 aaKnown RBP2.19□□□□□ -2.06
CAPRIN1-208ENST00000530008 PLXNA4Q9HCM2 1894 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 PNMA8CA0A1B0GUJ8 204 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 IFITM5A6NNB3 132 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 HMGN1P05114 100 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 EVI2AP22794 236 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 DNAJB13P59910 316 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 SMIM7Q9BQ49 75 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 WFDC10AQ9H1F0 79 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 DNAJC15Q9Y5T4 150 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 KIAA1549Q9HCM3 1950 aa2.18□□□□□ -2.06
CAPRIN1-208ENST00000530008 IGHV1-24A0A0C4DH33 117 aa2.17□□□□□ -2.06
CAPRIN1-208ENST00000530008 LINC00299Q6ZSB3 139 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms