RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 PRAC2D3DTV9 90 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 RAB3DO95716 219 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 MT-ND6P03923 174 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 SLC25A5P05141 298 aaKnown RBP4.02□□□□□ -1.77
VPS26B-204ENST00000527586 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 GADD45AP24522 165 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 C1orf137Q5JT78 98 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 TMEM17Q86X19 198 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 DEFB107AQ8IZN7 70 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 LRRC20Q8TCA0 184 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 RASL10AQ92737 203 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 CENPNQ96H22 339 aaPredicted RBP4.02□□□□□ -1.77
VPS26B-204ENST00000527586 LINC00477Q96M19 166 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 GPR82Q96P67 336 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 AUNIPQ9H7T9 357 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 RHBDL2Q9NX52 303 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 MGAT4CQ9UBM8 478 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 ANXA10Q9UJ72 324 aa4.02□□□□□ -1.77
VPS26B-204ENST00000527586 A0A087WX48 190 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 EFCAB10A6NFE3 127 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 ZFP92A6NM28 416 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 NOTOA8MTQ0 251 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 RGS13O14921 159 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 MPDU1O75352 247 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 CRPP02741 224 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 H2AFB2P0C5Z0 115 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 CFC1P0CG37 223 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 HLA-DMAP28067 261 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 SS18Q15532 418 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 CT83Q5H943 113 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 SPANXN2Q5MJ10 180 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 OR4D10Q8NGI6 311 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 RNASEH2CQ8TDP1 164 aaKnown RBP4.01□□□□□ -1.77
VPS26B-204ENST00000527586 PDCD10Q9BUL8 212 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 GPN1Q9HCN4 374 aaPredicted RBP4.01□□□□□ -1.77
VPS26B-204ENST00000527586 MRPS18AQ9NVS2 196 aaKnown RBP4.01□□□□□ -1.77
VPS26B-204ENST00000527586 EHFQ9NZC4 300 aa4.01□□□□□ -1.77
VPS26B-204ENST00000527586 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
VPS26B-204ENST00000527586 TMEM272A0A1B0GTI8 110 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 K7EQM0 130 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 IGKV1-39P01597 117 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 IGKV1D-39P04432 117 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 PRDX6P30041 224 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 RNASE4P34096 147 aaKnown RBP4□□□□□ -1.77
VPS26B-204ENST00000527586 KLF9Q13886 244 aaPredicted RBP4□□□□□ -1.77
VPS26B-204ENST00000527586 RHOHQ15669 191 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 GUK1Q16774 197 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 KCNIP4Q6PIL6 250 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 LINC00173Q6ZV60 143 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 MARCH1Q8TCQ1 289 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 PHYHIPQ92561 330 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 MRGPRFQ96AM1 343 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 FAM3DQ96BQ1 224 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 SAT2Q96F10 170 aaPredicted RBP4□□□□□ -1.77
VPS26B-204ENST00000527586 ODF3Q96PU9 254 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 SSBP4Q9BWG4 385 aaPredicted RBP4□□□□□ -1.77
VPS26B-204ENST00000527586 GABARAPL3Q9BY60 117 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 PLCXD1Q9NUJ7 323 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 RAB22AQ9UL26 194 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 MDN1Q9NU22 5596 aa4□□□□□ -1.77
VPS26B-204ENST00000527586 IGKV1D-37A0A075B6S9 117 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 A0A087WWC5 75 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 A0A096LNI7 61 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 G3V2T6 193 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 FKBP6O75344 327 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 IGLV7-43P04211 117 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 FABP1P07148 127 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 OR4E1P0C645 316 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 GABRB1P18505 474 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 CEBPGP53567 150 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 SPCS3P61009 180 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 C2orf83Q53S99 150 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 NAA50Q9GZZ1 169 aaKnown RBP3.99□□□□□ -1.77
VPS26B-204ENST00000527586 SSR3Q9UNL2 185 aa3.99□□□□□ -1.77
VPS26B-204ENST00000527586 CARHSP1Q9Y2V2 147 aaKnown RBP3.99□□□□□ -1.77
VPS26B-204ENST00000527586 TRBV6-4A0A1B0GX49 114 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 HOXB5P09067 269 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 RPS25P62851 125 aaKnown RBP3.98□□□□□ -1.77
VPS26B-204ENST00000527586 RAB31Q13636 194 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 OPCMLQ14982 345 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 CDNFQ49AH0 187 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 LINC00518Q8N0U6 118 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 CYB561D1Q8N8Q1 229 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 GLYATL2Q8WU03 294 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 NUDCD2Q8WVJ2 157 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 PYDC1Q8WXC3 89 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 BORCS5Q969J3 196 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 GFI1Q99684 422 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 CHCHD7Q9BUK0 85 aa3.98□□□□□ -1.77
VPS26B-204ENST00000527586 IGLV10-54A0A075B6I4 117 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 A0A0A6YYH2 397 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 FAM240BA0A1B0GVZ2 78 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 A0A1W2PPV4 95 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 GAGE12JA6NER3 117 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 GAGE10A6NGK3 116 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 FBLL1A6NHQ2 334 aaKnown RBP3.97□□□□□ -1.77
VPS26B-204ENST00000527586 A6NJ64 397 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 KLLNB2CW77 178 aa3.97□□□□□ -1.77
VPS26B-204ENST00000527586 PFDN1O60925 122 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms