RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 AGPAT4-IT1Q9H0P7 198 aa12.02□□□□□ -0.49
NR1H3-229ENST00000527464 BORCS7-ASMTA0A0B4J1R7 106 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 TRBV7-9A0A0J9YWB2 115 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 RBAKDNA6NC62 111 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 CRISP2P16562 243 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 AZU1P20160 251 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 ATP6V0CP27449 155 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 RANP62826 216 aaKnown RBP12.01□□□□□ -0.49
NR1H3-229ENST00000527464 ERCC8Q13216 396 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 KIR3DS1Q14943 382 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 TMEM78Q5T7P6 136 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 CCDC28AQ8IWP9 274 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 RXFP4Q8TDU9 374 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 TMEM263Q8WUH6 116 aaKnown RBP12.01□□□□□ -0.49
NR1H3-229ENST00000527464 GNPNAT1Q96EK6 184 aaPredicted RBP12.01□□□□□ -0.49
NR1H3-229ENST00000527464 Q9H3A6 140 aa12.01□□□□□ -0.49
NR1H3-229ENST00000527464 PLAC8L1A1L4L8 177 aa12□□□□□ -0.49
NR1H3-229ENST00000527464 C7orf71A4D174 169 aa12□□□□□ -0.49
NR1H3-229ENST00000527464 KLLNB2CW77 178 aa12□□□□□ -0.49
NR1H3-229ENST00000527464 PRM2P04554 102 aa12□□□□□ -0.49
NR1H3-229ENST00000527464 FAM74A1Q5RGS3 127 aa12□□□□□ -0.49
NR1H3-229ENST00000527464 ARL6IP6Q8N6S5 226 aa12□□□□□ -0.49
NR1H3-229ENST00000527464 RNASE8Q8TDE3 154 aaKnown RBP12□□□□□ -0.49
NR1H3-229ENST00000527464 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
NR1H3-229ENST00000527464 NDUFAF3Q9BU61 184 aa12□□□□□ -0.49
NR1H3-229ENST00000527464 TIMM8BQ9Y5J9 83 aaPredicted RBP12□□□□□ -0.49
NR1H3-229ENST00000527464 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
NR1H3-229ENST00000527464 G3V3Q6 166 aa11.99□□□□□ -0.49
NR1H3-229ENST00000527464 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
NR1H3-229ENST00000527464 HTN1P15515 57 aa11.99□□□□□ -0.49
NR1H3-229ENST00000527464 CDC34P49427 236 aaPredicted RBP11.99□□□□□ -0.49
NR1H3-229ENST00000527464 OTORQ9NRC9 128 aa11.99□□□□□ -0.49
NR1H3-229ENST00000527464 ZNF492Q9P255 531 aa11.99□□□□□ -0.49
NR1H3-229ENST00000527464 VPS13DQ5THJ4 4388 aa11.99□□□□□ -0.49
NR1H3-229ENST00000527464 TRAV12-3A0A0B4J271 114 aa11.98□□□□□ -0.49
NR1H3-229ENST00000527464 J3KRW8 73 aa11.98□□□□□ -0.49
NR1H3-229ENST00000527464 TAAR5O14804 337 aa11.98□□□□□ -0.49
NR1H3-229ENST00000527464 STAG3L2P0CL84 134 aa11.98□□□□□ -0.49
NR1H3-229ENST00000527464 STAG3L3P0CL85 134 aa11.98□□□□□ -0.49
NR1H3-229ENST00000527464 ZNF138P52744 262 aa11.98□□□□□ -0.49
NR1H3-229ENST00000527464 RPL7L1Q6DKI1 246 aaKnown RBP11.98□□□□□ -0.49
NR1H3-229ENST00000527464 VGLL1Q99990 258 aa11.98□□□□□ -0.49
NR1H3-229ENST00000527464 LINC00467Q9BRT7 94 aa11.98□□□□□ -0.49
NR1H3-229ENST00000527464 PLA2G2EQ9NZK7 142 aa11.98□□□□□ -0.49
NR1H3-229ENST00000527464 GPX1P07203 203 aa11.97□□□□□ -0.49
NR1H3-229ENST00000527464 ZFAND2AQ8N6M9 145 aa11.97□□□□□ -0.49
NR1H3-229ENST00000527464 CMTM2Q8TAZ6 248 aa11.97□□□□□ -0.49
NR1H3-229ENST00000527464 RAB24Q969Q5 203 aa11.97□□□□□ -0.49
NR1H3-229ENST00000527464 LENEPQ9Y5L5 61 aa11.97□□□□□ -0.49
NR1H3-229ENST00000527464 PGPA6NDG6 321 aa11.96□□□□□ -0.49
NR1H3-229ENST00000527464 DIRC3C9JPN6 131 aa11.96□□□□□ -0.49
NR1H3-229ENST00000527464 ZNF324O75467 553 aaPredicted RBP11.96□□□□□ -0.49
NR1H3-229ENST00000527464 ARL14EPLP0DKL9 152 aa11.96□□□□□ -0.49
NR1H3-229ENST00000527464 SUN5Q8TC36 379 aa11.96□□□□□ -0.49
NR1H3-229ENST00000527464 TMED6Q8WW62 240 aa11.96□□□□□ -0.49
NR1H3-229ENST00000527464 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.49
NR1H3-229ENST00000527464 SH3BGRL3Q9H299 93 aa11.96□□□□□ -0.49
NR1H3-229ENST00000527464 KMT2AQ03164 3969 aa11.95□□□□□ -0.5
NR1H3-229ENST00000527464 CBY3A6NI87 242 aa11.95□□□□□ -0.5
NR1H3-229ENST00000527464 ARPC5O15511 151 aa11.95□□□□□ -0.5
NR1H3-229ENST00000527464 EIF3GO75821 320 aaKnown RBP eCLIP11.95□□□□□ -0.5
NR1H3-229ENST00000527464 DEFB130BP0DP73 79 aa11.95□□□□□ -0.5
NR1H3-229ENST00000527464 DEFB130AP0DP74 79 aa11.95□□□□□ -0.5
NR1H3-229ENST00000527464 RNASE4P34096 147 aaKnown RBP11.95□□□□□ -0.5
NR1H3-229ENST00000527464 CD300CQ08708 224 aa11.95□□□□□ -0.5
NR1H3-229ENST00000527464 NOP10Q9NPE3 64 aaKnown RBP11.95□□□□□ -0.5
NR1H3-229ENST00000527464 SNURFLB1AK76 121 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 HMGB3O15347 200 aaKnown RBP11.94□□□□□ -0.5
NR1H3-229ENST00000527464 CXorf1O96002 111 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 ATP5G1P05496 136 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 P0DMU3 169 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 FAM231AP0DMU4 169 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 FAM231CP0DMU5 169 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 HTN3P15516 51 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 ATP5G3P48201 142 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 BTN1A1Q13410 526 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 ANXA2RQ3ZCQ2 193 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 EIF4E3Q8N5X7 224 aaKnown RBP11.94□□□□□ -0.5
NR1H3-229ENST00000527464 ZNF680Q8NEM1 530 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 HYLS1Q96M11 299 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 TMEM167BQ9NRX6 74 aa11.94□□□□□ -0.5
NR1H3-229ENST00000527464 DNAH6Q9C0G6 4158 aa11.93□□□□□ -0.5
NR1H3-229ENST00000527464 GCHFRP30047 84 aa11.93□□□□□ -0.5
NR1H3-229ENST00000527464 DAZ2Q13117 558 aaKnown RBP11.93□□□□□ -0.5
NR1H3-229ENST00000527464 ZNF345Q14585 488 aa11.93□□□□□ -0.5
NR1H3-229ENST00000527464 LINC00612Q8N6U2 182 aa11.93□□□□□ -0.5
NR1H3-229ENST00000527464 ST6GAL2Q96JF0 529 aa11.93□□□□□ -0.5
NR1H3-229ENST00000527464 SERTM2A0A1B0GWG4 89 aa11.92□□□□□ -0.5
NR1H3-229ENST00000527464 HMSDA8MTL9 139 aa11.92□□□□□ -0.5
NR1H3-229ENST00000527464 C15orf53Q8NAA6 179 aa11.92□□□□□ -0.5
NR1H3-229ENST00000527464 Q8TAT8 98 aa11.92□□□□□ -0.5
NR1H3-229ENST00000527464 CYTL1Q9NRR1 136 aa11.92□□□□□ -0.5
NR1H3-229ENST00000527464 CTXND1A0A1B0GTU2 59 aa11.91□□□□□ -0.5
NR1H3-229ENST00000527464 RGS13O14921 159 aa11.91□□□□□ -0.5
NR1H3-229ENST00000527464 AKR1C8PQ5T2L2 129 aa11.91□□□□□ -0.5
NR1H3-229ENST00000527464 PRR9Q5T870 116 aa11.91□□□□□ -0.5
NR1H3-229ENST00000527464 KCNRGQ8N5I3 272 aa11.91□□□□□ -0.5
NR1H3-229ENST00000527464 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
NR1H3-229ENST00000527464 IGHV1OR15-1A0A075B7D0 117 aa11.9□□□□□ -0.5
NR1H3-229ENST00000527464 SMLR1H3BR10 107 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms