RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-208	ENST00000526821	IGLV2-8	P01709	118 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TCRA	P04437	139 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CRYBA1	P05813	215 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	MEOX2	P50222	304 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TAS2R60	P59551	318 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	KLF5	Q13887	457 aa	Predicted RBP	4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ZNF674	Q2M3X9	581 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	FAM106A	Q4KMX7	169 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	C18orf65	Q6ZTR6	163 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	LINC01551	Q86U37	167 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	EXOC3-AS1	Q8N2X6	119 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	C4orf3	Q8WVX3	66 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	IGF2BP2-AS1	Q96M15	143 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	C20orf24	Q9BUV8	137 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	DAZ1	Q9NQZ3	744 aa	Known RBP	4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TMEM242	Q9NWH2	141 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SMPX	Q9UHP9	88 aa		4.64	□□□□□ -1.67
ATPAF1-208	ENST00000526821	C2CD3	Q4AC94	2353 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	IGHV3OR16-13	A0A075B7E8	117 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	IGHV3-74	A0A0B4J1X5	117 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TRAV8-2	A0A0B4J237	113 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TRBV6-1	A0A0K0K1D8	114 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821		A0A1W2PS18	150 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TMEM213	A2RRL7	107 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	HELT	A6NFD8	242 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PGPEP1L	A6NFU8	196 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CHEK1	O14757	476 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TCF21	O43680	179 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	IGLV2-11	P01706	119 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SLC25A5	P05141	298 aa	Known RBP	4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	S100A9	P06702	114 aa	Known RBP	4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	S100A6	P06703	90 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	HOXD3	P31249	432 aa	Predicted RBP	4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	AKR1C3	P42330	323 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	GALR1	P47211	349 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CNN1	P51911	297 aa	Known RBP	4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	GNG5	P63218	68 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	PSG9	Q00887	426 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	BTN1A1	Q13410	526 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TMEM183B	Q1AE95	376 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	RPEL1	Q2QD12	228 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CBLN2	Q8IUK8	224 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	OCC1	Q8TAD7	63 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	LINC00479	Q96M42	142 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	YPEL4	Q96NS1	127 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ATG101	Q9BSB4	218 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TUBA4B	Q9H853	241 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	UFC1	Q9Y3C8	167 aa		4.63	□□□□□ -1.67
ATPAF1-208	ENST00000526821	IGHV3-49	A0A0A0MS15	119 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	IGHV3-66	A0A0C4DH42	116 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SERTM2	A0A1B0GWG4	89 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ZNF320	A2RRD8	509 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CXorf65	A6NEN9	183 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	LINC01619	G3V211	115 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821		K7EN84	100 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821		M0R3E3	92 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ISLR	O14498	428 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SOCS3	O14543	225 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	LTA	P01374	205 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CD28	P10747	220 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	EDN2	P20800	178 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	GNG4	P50150	75 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ADIRF	Q15847	76 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	RNF212	Q495C1	297 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CENPW	Q5EE01	88 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TMEM88	Q6PEY1	159 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ADAMTSL5	Q6ZMM2	481 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	ISOC2	Q96AB3	205 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SMIM12	Q96EX1	92 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	GRAMD2B	Q96HH9	432 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	FMC1	Q96HJ9	113 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SLC50A1	Q9BRV3	221 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	RHPN1-AS1	Q9BWJ2	59 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CTDSP1	Q9GZU7	261 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	AAMDC	Q9H7C9	122 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	RPS10P5	Q9NQ39	176 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SMCO4	Q9NRQ5	59 aa		4.62	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TRAV34	A0A0B4J273	112 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	C2orf70	A6NJV1	201 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	COLCA2	A8K830	154 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	RHOD	O00212	210 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	GCG	P01275	180 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	MT-ND4L	P03901	98 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	SYNJ2BP	P57105	145 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	DEFB136	Q30KP8	78 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	GOLT1A	Q6ZVE7	132 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	COX8C	Q7Z4L0	72 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821		Q86TA4	180 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	TMEM75	Q8N9X5	138 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	OR11H1	Q8NG94	326 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	OR1N2	Q8NGR9	330 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CMTM2	Q8TAZ6	248 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	MRPL53	Q96EL3	112 aa	Known RBP	4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	C12orf57	Q99622	126 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CITED2	Q99967	270 aa	Predicted RBP	4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	NRN1	Q9NPD7	142 aa		4.61	□□□□□ -1.67
ATPAF1-208	ENST00000526821	CLEC5A	Q9NY25	188 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms