RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 RCHY1Q96PM5 261 aa6.32□□□□□ -1.4
LRRK1-205ENST00000526457 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
LRRK1-205ENST00000526457 ARMS2P0C7Q2 107 aa6.32□□□□□ -1.4
LRRK1-205ENST00000526457 RNASE2P10153 161 aaKnown RBP6.32□□□□□ -1.4
LRRK1-205ENST00000526457 MP68P56378 58 aa6.32□□□□□ -1.4
LRRK1-205ENST00000526457 IGLC7A0M8Q6 106 aa6.32□□□□□ -1.4
LRRK1-205ENST00000526457 PRR33A8MZF0 331 aa6.32□□□□□ -1.4
LRRK1-205ENST00000526457 TAX1BP3O14907 124 aa6.32□□□□□ -1.4
LRRK1-205ENST00000526457 RSPO4Q2I0M5 234 aaPredicted RBP6.32□□□□□ -1.4
LRRK1-205ENST00000526457 IGHV3-11P01762 117 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 ZNF329Q86UD4 541 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 A0A087WWL8 130 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 RPL36AP83881 106 aaKnown RBP6.31□□□□□ -1.4
LRRK1-205ENST00000526457 MST1LQ2TV78 715 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 FHL5Q5TD97 284 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 RPL36ALQ969Q0 106 aaKnown RBP6.31□□□□□ -1.4
LRRK1-205ENST00000526457 DEFB123Q8N688 67 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 LINC00527Q9UJ94 153 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 NBR2O15453 112 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 FOXS1O43638 330 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 HLA-DRB4P13762 266 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 WFDC2Q14508 124 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 HLA-DRB4X5D2U9 266 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 COL4A1P02462 1669 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 SMIM10L1P0DMW3 83 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 SMIM10Q96HG1 83 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 LINC00271P0C7V0 271 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 A0A0A6YYD4 124 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 PRR7Q8TB68 274 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 NDUFV3P56181 108 aaKnown RBP6.31□□□□□ -1.4
LRRK1-205ENST00000526457 SS18Q15532 418 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 PTH2Q96A98 100 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 FAM240AA0A1B0GVK7 77 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 IL9P15248 144 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 FOXI2Q6ZQN5 318 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 Q86TA4 180 aa6.31□□□□□ -1.4
LRRK1-205ENST00000526457 YPEL1O60688 119 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 YPEL2Q96QA6 119 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 M0R1W7 72 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 CELA2AP08217 269 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 CR1LQ2VPA4 569 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 MPLKIPQ8TAP9 179 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 IGKV1D-8A0A087WSZ0 117 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 EFEMP2O95967 443 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 Q8N8P6 123 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 IGHV5-10-1A0A0J9YXX1 117 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 F8VRH5 84 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 CCL21O00585 134 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 C22orf46C9J442 243 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 J3QRE1 110 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 Q6ZS52 159 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 C8orf31Q8N9H6 132 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 LIME1Q9H400 295 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 CTSBP07858 339 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 CFPP27918 469 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 MRPL35Q9NZE8 188 aaKnown RBP6.3□□□□□ -1.4
LRRK1-205ENST00000526457 IGHV1OR15-9A0A0B4J2B8 117 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 RHODO00212 210 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 THBDP07204 575 aa6.3□□□□□ -1.4
LRRK1-205ENST00000526457 IGLV3-21P80748 117 aaPredicted RBP6.3□□□□□ -1.4
LRRK1-205ENST00000526457 C1orf162Q8NEQ5 155 aaPredicted RBP6.3□□□□□ -1.4
LRRK1-205ENST00000526457 MRPL51Q4U2R6 128 aaKnown RBP6.29□□□□□ -1.4
LRRK1-205ENST00000526457 TMEM14EPQ6UXP3 125 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 ORMDL1Q9P0S3 153 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 LINC00312Q9Y6C7 94 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 TRGV1A0A0A0MS02 117 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 CRYGBP07316 175 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 A0A087WV48 116 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 TMEM213A2RRL7 107 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 PFN2P35080 140 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 C14orf132Q9NPU4 83 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 MRPS18CQ9Y3D5 142 aaKnown RBP6.29□□□□□ -1.4
LRRK1-205ENST00000526457 J3QQQ9 107 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 CD24P25063 80 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 REPIN1Q9BWE0 567 aaKnown RBP6.29□□□□□ -1.4
LRRK1-205ENST00000526457 IGLL5B9A064 214 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 IGLC1P0CG04 106 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 UNQ6494/PRO21346Q6UXR6 183 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 GFI1Q99684 422 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 ATP5G1P05496 136 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 MORN2Q502X0 79 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 ZNF492Q9P255 531 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 ADAMTS20P59510 1910 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 NKAPP1Q8N9T2 125 aa6.29□□□□□ -1.4
LRRK1-205ENST00000526457 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.28□□□□□ -1.4
LRRK1-205ENST00000526457 ZNF493Q6ZR52 646 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 FAM216BQ8N7L0 139 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 LINC00479Q96M42 142 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 WIPF3A6NGB9 483 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 CFC1P0CG37 223 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 LINC00114Q6XXX2 140 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 VWC2Q2TAL6 325 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 C2orf66Q6UXQ4 117 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 TMEM133Q9H2Q1 129 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 CCL4P13236 92 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 PAX8Q06710 450 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 PCP2Q8IVA1 136 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 FAM166AQ6J272 317 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms