RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 RPUSD4Q96CM3 377 aaKnown RBP7.88□□□□□ -1.15
NEDD8-204ENST00000526430 LRP1BQ9NZR2 4599 aa7.87□□□□□ -1.15
NEDD8-204ENST00000526430 CXorf1O96002 111 aa7.87□□□□□ -1.15
NEDD8-204ENST00000526430 C4BPBP20851 252 aa7.87□□□□□ -1.15
NEDD8-204ENST00000526430 LYPD1Q8N2G4 141 aa7.87□□□□□ -1.15
NEDD8-204ENST00000526430 OR8A1Q8NGG7 326 aa7.87□□□□□ -1.15
NEDD8-204ENST00000526430 MRPL53Q96EL3 112 aaKnown RBP7.87□□□□□ -1.15
NEDD8-204ENST00000526430 Q9H3A6 140 aa7.87□□□□□ -1.15
NEDD8-204ENST00000526430 TRAV1-1A0A0B4J248 108 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 KIR2DL5BA0A0G2JN68 375 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 KIR2DL5BA0A0G2JPC4 375 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 MAP1LC3B2A6NCE7 125 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 PGPA6NDG6 321 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 CRXO43186 299 aaPredicted RBP7.86□□□□□ -1.15
NEDD8-204ENST00000526430 CNN1P51911 297 aaKnown RBP7.86□□□□□ -1.15
NEDD8-204ENST00000526430 NANOS2P60321 138 aaKnown RBP7.86□□□□□ -1.15
NEDD8-204ENST00000526430 PSG9Q00887 426 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 KIR3DS1Q14943 382 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 ALKAL2Q6UX46 152 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 DPPA3Q6W0C5 159 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 KIR2DL5AQ8N109 375 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 ZNF738Q8NE65 137 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 KIR2DL5BQ8NHK3 375 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 C11orf45Q8TAV5 145 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 FAM213BQ8TBF2 198 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 LRRC20Q8TCA0 184 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 FAM19A4Q96LR4 140 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 MAP1LC3BQ9GZQ8 125 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 AGPAT4-IT1Q9H0P7 198 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 CSTL1Q9H114 145 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 SLC35B3Q9H1N7 401 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 C11orf68Q9H3H3 251 aaKnown RBP7.86□□□□□ -1.15
NEDD8-204ENST00000526430 OTORQ9NRC9 128 aa7.86□□□□□ -1.15
NEDD8-204ENST00000526430 YTHDF2Q9Y5A9 579 aaKnown RBP7.86□□□□□ -1.15
NEDD8-204ENST00000526430 FAM74A7A6NL05 159 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 GGTLC3B5MD39 225 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 NPIPB6E9PJ23 425 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 IGKV3-20P01619 116 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 CT45A10P0DMU9 189 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 RAB5CP51148 216 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 ERCC8Q13216 396 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 LGALS9BQ3B8N2 356 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 CCDC28AQ8IWP9 274 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 LYPD6BQ8NI32 183 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 SFT2D1Q8WV19 159 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 VGLL1Q99990 258 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 CLEC5AQ9NY25 188 aa7.85□□□□□ -1.15
NEDD8-204ENST00000526430 A0A1W2PRE2 83 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 DIRC3C9JPN6 131 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 C11orf94C9JXX5 98 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 IGLV2-11P01706 119 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 H2AFB1P0C5Y9 115 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 FXYD7P58549 80 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 SUMO1P63165 101 aaKnown RBP7.84□□□□□ -1.15
NEDD8-204ENST00000526430 C9orf47Q6ZRZ4 202 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 STHQ8IWL8 128 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 OR4B1Q8NGF8 309 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 SCRT2Q9NQ03 307 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 TMEM167BQ9NRX6 74 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 PRELID1Q9Y255 219 aa7.84□□□□□ -1.15
NEDD8-204ENST00000526430 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
NEDD8-204ENST00000526430 IGKV2-40A0A087WW87 121 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-204ENST00000526430 IGLL5B9A064 214 aa7.83□□□□□ -1.16
NEDD8-204ENST00000526430 IGKV2D-40P01614 121 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-204ENST00000526430 RBMY1A1P0DJD3 496 aaKnown RBP7.83□□□□□ -1.16
NEDD8-204ENST00000526430 RBMY1CP0DJD4 496 aa7.83□□□□□ -1.16
NEDD8-204ENST00000526430 GNG5P63218 68 aa7.83□□□□□ -1.16
NEDD8-204ENST00000526430 IFITM2Q01629 132 aa7.83□□□□□ -1.16
NEDD8-204ENST00000526430 HIST1H1AQ02539 215 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-204ENST00000526430 RBMY1FQ15415 496 aaKnown RBP7.83□□□□□ -1.16
NEDD8-204ENST00000526430 EIF5AL1Q6IS14 154 aaKnown RBP7.83□□□□□ -1.16
NEDD8-204ENST00000526430 EBLN2Q6P2I7 272 aa7.83□□□□□ -1.16
NEDD8-204ENST00000526430 TEX261Q6UWH6 196 aa7.83□□□□□ -1.16
NEDD8-204ENST00000526430 C1orf158Q8N1D5 194 aa7.83□□□□□ -1.16
NEDD8-204ENST00000526430 ARL6IP6Q8N6S5 226 aa7.83□□□□□ -1.16
NEDD8-204ENST00000526430 TVP23CQ96ET8 276 aa7.83□□□□□ -1.16
NEDD8-204ENST00000526430 A0A1B0GV50 99 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 DUSP14O95147 198 aaKnown RBP7.82□□□□□ -1.16
NEDD8-204ENST00000526430 ATP5G3P48201 142 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 UBE2G2P60604 165 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 MORN3Q6PF18 240 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-204ENST00000526430 Q6ZQT7 251 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 POM121L12Q8N7R1 296 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 ZNF680Q8NEM1 530 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 AAMDCQ9H7C9 122 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 PPP1R14DQ9NXH3 145 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 XCL2Q9UBD3 114 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 EPDR1Q9UM22 224 aa7.82□□□□□ -1.16
NEDD8-204ENST00000526430 TRAV8-1A0A0A6YYK1 113 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 RBAKDNA6NC62 111 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 C16orf90A8MZG2 172 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 M0R2Z0 102 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 PAGE4O60829 102 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 CA1P00915 261 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-204ENST00000526430 TCRAP04437 139 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 PRM2P04554 102 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 PRR9Q5T870 116 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 ZFAND2AQ8N6M9 145 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 RXFP4Q8TDU9 374 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms