RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 DEFB130BP0DP73 79 aa13.04□□□□□ -0.32
TSPAN4-216ENST00000526055 DEFB130AP0DP74 79 aa13.04□□□□□ -0.32
TSPAN4-216ENST00000526055 CRISP2P16562 243 aa13.04□□□□□ -0.32
TSPAN4-216ENST00000526055 VPS13DQ5THJ4 4388 aa13.04□□□□□ -0.32
TSPAN4-216ENST00000526055 FXYD6-FXYD2A0A087WZ82 144 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 TRBV7-9A0A0J9YWB2 115 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 C7orf71A4D174 169 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 ATP5G1P05496 136 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 OR10J4P0C629 311 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 ATP5G3P48201 142 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 ERCC8Q13216 396 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 ZNF266Q14584 549 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 ACOT6Q3I5F7 207 aaPredicted RBP13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 Q5BKY6 102 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 TMEM78Q5T7P6 136 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 LINC00467Q9BRT7 94 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 AGPAT4-IT1Q9H0P7 198 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 WFDC1Q9HC57 220 aa13.03□□□□□ -0.32
TSPAN4-216ENST00000526055 DNAH6Q9C0G6 4158 aa13.02□□□□□ -0.32
TSPAN4-216ENST00000526055 TRAV12-3A0A0B4J271 114 aa13.02□□□□□ -0.33
TSPAN4-216ENST00000526055 RBAKDNA6NC62 111 aa13.02□□□□□ -0.33
TSPAN4-216ENST00000526055 M6PRP20645 277 aa13.02□□□□□ -0.33
TSPAN4-216ENST00000526055 CSN1S1P47710 185 aa13.02□□□□□ -0.33
TSPAN4-216ENST00000526055 UBE2L3P68036 154 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-216ENST00000526055 FAM122CQ6P4D5 195 aa13.02□□□□□ -0.33
TSPAN4-216ENST00000526055 TMEM88Q6PEY1 159 aa13.02□□□□□ -0.33
TSPAN4-216ENST00000526055 NOP10Q9NPE3 64 aaKnown RBP13.02□□□□□ -0.33
TSPAN4-216ENST00000526055 RNF212Q495C1 297 aa13.01□□□□□ -0.33
TSPAN4-216ENST00000526055 PQLC2Q6ZP29 291 aa13.01□□□□□ -0.33
TSPAN4-216ENST00000526055 LINC00612Q8N6U2 182 aa13.01□□□□□ -0.33
TSPAN4-216ENST00000526055 ZNF503Q96F45 646 aa13.01□□□□□ -0.33
TSPAN4-216ENST00000526055 PHYHIPLQ96FC7 376 aa13.01□□□□□ -0.33
TSPAN4-216ENST00000526055 ZNF492Q9P255 531 aa13.01□□□□□ -0.33
TSPAN4-216ENST00000526055 TNFSF18Q9UNG2 199 aa13.01□□□□□ -0.33
TSPAN4-216ENST00000526055 SNURFLB1AK76 121 aa13□□□□□ -0.33
TSPAN4-216ENST00000526055 J3KRW8 73 aa13□□□□□ -0.33
TSPAN4-216ENST00000526055 ZNF324O75467 553 aaPredicted RBP13□□□□□ -0.33
TSPAN4-216ENST00000526055 DAZ2Q13117 558 aaKnown RBP13□□□□□ -0.33
TSPAN4-216ENST00000526055 ZNF680Q8NEM1 530 aa13□□□□□ -0.33
TSPAN4-216ENST00000526055 RXFP4Q8TDU9 374 aa13□□□□□ -0.33
TSPAN4-216ENST00000526055 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 A0A1W2PPV4 95 aa12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 F5H768 121 aa12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 G3V3Q6 166 aa12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 GPX1P07203 203 aa12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 FAM3BP58499 235 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 RANP62826 216 aaKnown RBP12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 ANXA2RQ3ZCQ2 193 aa12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 ARL6IP6Q8N6S5 226 aa12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 OR2G3Q8NGZ4 309 aa12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 VGLL1Q99990 258 aa12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 Q9H3A6 140 aa12.99□□□□□ -0.33
TSPAN4-216ENST00000526055 RNF222A6NCQ9 220 aa12.98□□□□□ -0.33
TSPAN4-216ENST00000526055 ZNF138P52744 262 aa12.98□□□□□ -0.33
TSPAN4-216ENST00000526055 UBE2DNLQ8IWF7 75 aa12.98□□□□□ -0.33
TSPAN4-216ENST00000526055 ZFAND2AQ8N6M9 145 aa12.98□□□□□ -0.33
TSPAN4-216ENST00000526055 PSMG3Q9BT73 122 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-216ENST00000526055 LENEPQ9Y5L5 61 aa12.98□□□□□ -0.33
TSPAN4-216ENST00000526055 ARPC5O15511 151 aa12.97□□□□□ -0.33
TSPAN4-216ENST00000526055 RNASE4P34096 147 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-216ENST00000526055 CD300CQ08708 224 aa12.97□□□□□ -0.33
TSPAN4-216ENST00000526055 BTN1A1Q13410 526 aa12.97□□□□□ -0.33
TSPAN4-216ENST00000526055 FAM74A1Q5RGS3 127 aa12.97□□□□□ -0.33
TSPAN4-216ENST00000526055 EIF4E3Q8N5X7 224 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-216ENST00000526055 OTORQ9NRC9 128 aa12.97□□□□□ -0.33
TSPAN4-216ENST00000526055 BORCS7-ASMTA0A0B4J1R7 106 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 HMSDA8MTL9 139 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 TAAR5O14804 337 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 MBP02144 154 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 SERF2P84101 59 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 LGALS9BQ3B8N2 356 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 OR10G4Q8NGN3 311 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 OR10G9Q8NGN4 311 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 OR10G7Q8NGN6 311 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 TMED6Q8WW62 240 aa12.96□□□□□ -0.33
TSPAN4-216ENST00000526055 DIRC3C9JPN6 131 aa12.95□□□□□ -0.34
TSPAN4-216ENST00000526055 SMLR1H3BR10 107 aa12.95□□□□□ -0.34
TSPAN4-216ENST00000526055 RAB2AP61019 212 aa12.95□□□□□ -0.34
TSPAN4-216ENST00000526055 ZNF345Q14585 488 aa12.95□□□□□ -0.34
TSPAN4-216ENST00000526055 IBA57Q5T440 356 aaKnown RBP12.95□□□□□ -0.34
TSPAN4-216ENST00000526055 LINC00336Q6ZUF6 198 aa12.95□□□□□ -0.34
TSPAN4-216ENST00000526055 C18orf15Q96N68 181 aa12.95□□□□□ -0.34
TSPAN4-216ENST00000526055 hCG_2014768A0A024R1R8 64 aa12.94□□□□□ -0.34
TSPAN4-216ENST00000526055 RGS13O14921 159 aa12.94□□□□□ -0.34
TSPAN4-216ENST00000526055 CDC34P49427 236 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-216ENST00000526055 TCTE3Q8IZS6 198 aa12.94□□□□□ -0.34
TSPAN4-216ENST00000526055 HSD17B11Q8NBQ5 300 aa12.94□□□□□ -0.34
TSPAN4-216ENST00000526055 C11orf72Q8NBR9 251 aa12.94□□□□□ -0.34
TSPAN4-216ENST00000526055 CMTM2Q8TAZ6 248 aa12.94□□□□□ -0.34
TSPAN4-216ENST00000526055 ST6GAL2Q96JF0 529 aa12.94□□□□□ -0.34
TSPAN4-216ENST00000526055 ATP6V0CP27449 155 aa12.93□□□□□ -0.34
TSPAN4-216ENST00000526055 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
TSPAN4-216ENST00000526055 HECTD4Q9Y4D8 3996 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 IGHV1OR15-1A0A075B7D0 117 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 A0A0D9SG52 128 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 GAGE12BA1L429 117 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 PGPA6NDG6 321 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 H3BNG1 76 aa12.92□□□□□ -0.34
TSPAN4-216ENST00000526055 GAGE7O76087 117 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms