RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 ODF3L1Q8IXM7 274 aa4□□□□□ -1.77
CD44-218ENST00000525469 FAM19A2Q8N3H0 131 aa4□□□□□ -1.77
CD44-218ENST00000525469 GJC3Q8NFK1 279 aa4□□□□□ -1.77
CD44-218ENST00000525469 ST8SIA1Q92185 356 aa4□□□□□ -1.77
CD44-218ENST00000525469 RPEQ96AT9 228 aa4□□□□□ -1.77
CD44-218ENST00000525469 BORCS8Q96FH0 119 aa4□□□□□ -1.77
CD44-218ENST00000525469 VSTM2LQ96N03 204 aa4□□□□□ -1.77
CD44-218ENST00000525469 DUX5Q96PT3 197 aa4□□□□□ -1.77
CD44-218ENST00000525469 VSIRQ9H7M9 311 aa4□□□□□ -1.77
CD44-218ENST00000525469 ZNF442Q9H7R0 627 aa4□□□□□ -1.77
CD44-218ENST00000525469 PLEKHA3Q9HB20 300 aa4□□□□□ -1.77
CD44-218ENST00000525469 ESM1Q9NQ30 184 aa4□□□□□ -1.77
CD44-218ENST00000525469 ONECUT1Q9UBC0 465 aa4□□□□□ -1.77
CD44-218ENST00000525469 VPREB3Q9UKI3 123 aa4□□□□□ -1.77
CD44-218ENST00000525469 WDR83OSQ9Y284 106 aa4□□□□□ -1.77
CD44-218ENST00000525469 KLF12Q9Y4X4 402 aa4□□□□□ -1.77
CD44-218ENST00000525469 RFNGQ9Y644 331 aa4□□□□□ -1.77
CD44-218ENST00000525469 TET2Q6N021 2002 aaPredicted RBP3.99□□□□□ -1.77
CD44-218ENST00000525469 RYR3Q15413 4870 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 SMIM9A6NGZ8 99 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 C15orf65H3BRN8 121 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 SNAI2O43623 268 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 PGLYRP1O75594 196 aaPredicted RBP3.99□□□□□ -1.77
CD44-218ENST00000525469 NAPSAO96009 420 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 IGHG1P01857 330 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 PRB2P02812 416 aaPredicted RBP3.99□□□□□ -1.77
CD44-218ENST00000525469 MGST1P10620 155 aaKnown RBP3.99□□□□□ -1.77
CD44-218ENST00000525469 MFAP2P55001 183 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 ZNF121P58317 390 aaPredicted RBP3.99□□□□□ -1.77
CD44-218ENST00000525469 B3GALT5-AS1P59052 145 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 ZNF718Q3SXZ3 478 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 CENPWQ5EE01 88 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 KIAA2026Q5HYC2 2103 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 LCN12Q6JVE5 192 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 MARCH3Q86UD3 253 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 TMEM219Q86XT9 240 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 GAPTQ8N292 157 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 FAM110DQ8TAY7 271 aaPredicted RBP3.99□□□□□ -1.77
CD44-218ENST00000525469 LRRC29Q8WV35 223 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 COQ2Q96H96 371 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 SGK494Q96LW2 274 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 SRSF8Q9BRL6 282 aaKnown RBP3.99□□□□□ -1.77
CD44-218ENST00000525469 TECRQ9NZ01 308 aaKnown RBP3.99□□□□□ -1.77
CD44-218ENST00000525469 CACNG5Q9UF02 275 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 CSDC2Q9Y534 153 aaKnown RBP3.99□□□□□ -1.77
CD44-218ENST00000525469 LHFPL6Q9Y693 200 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 ARHGAP32A7KAX9 2087 aa3.99□□□□□ -1.77
CD44-218ENST00000525469 DOCK11Q5JSL3 2073 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 A8MWV9 139 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 H3BSH0 61 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 CHEK1O14757 476 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 SYNGR3O43761 229 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 CXCL13O43927 109 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 CLPSP04118 112 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 IL4P05112 153 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 ELANEP08246 267 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 C8orf88P0DMB2 117 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 SCGB1C2P0DMR2 95 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 ORM2P19652 201 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 BCL3P20749 454 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 NPPCP23582 126 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 GATA2P23769 480 aaPredicted RBP3.98□□□□□ -1.77
CD44-218ENST00000525469 GCHFRP30047 84 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 VDAC2P45880 294 aaPredicted RBP3.98□□□□□ -1.77
CD44-218ENST00000525469 CAMPP49913 170 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 ETDBQ3ZM63 59 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 UTF1Q5T230 341 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 TSPO2Q5TGU0 170 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 RUSC1-AS1Q66K80 236 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 ZNF818PQ6ZRF7 136 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 Q6ZT83 130 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 OR11H6Q8NGC7 330 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 ZNRF2Q8NHG8 242 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 DAZAP1Q96EP5 407 aaKnown RBP3.98□□□□□ -1.77
CD44-218ENST00000525469 C1QTNF5Q9BXJ0 243 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 IDI2-AS1Q9NZ38 188 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
CD44-218ENST00000525469 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 TRBV20OR9-2A0A075B6H5 130 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 TMED7-TICAM2A0A0A6YYA0 188 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 TRAV5A0A0B4J249 113 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 FAM240AA0A1B0GVK7 77 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 A0A1B0GXF2 115 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 DNAJC9-AS1A6NH13 148 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 IGLL5B9A064 214 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 F2Z2F3 143 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 H3BP45 60 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 J3QLI3 93 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 K7EN84 100 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 ATP5LO75964 103 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 IGKV1D-33P01593 117 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 IGKV1-33P01594 117 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 ORM1P02763 201 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 SLC25A5P05141 298 aaKnown RBP3.97□□□□□ -1.77
CD44-218ENST00000525469 ACYP1P07311 99 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 ARL14EPLP0DKL9 152 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 FGF6P10767 208 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 DLX6P56179 175 aa3.97□□□□□ -1.77
CD44-218ENST00000525469 RBM11P57052 281 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms