RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 PSCAO43653 123 aa13.59□□□□□ -0.23
BEST1-203ENST00000524877 LYPD1Q8N2G4 141 aa13.59□□□□□ -0.23
BEST1-203ENST00000524877 CCL25O15444 150 aa13.59□□□□□ -0.23
BEST1-203ENST00000524877 IGKCP01834 107 aa13.59□□□□□ -0.23
BEST1-203ENST00000524877 SCGB3A1Q96QR1 104 aa13.59□□□□□ -0.23
BEST1-203ENST00000524877 SHANK2-AS3Q9BTD1 123 aa13.59□□□□□ -0.23
BEST1-203ENST00000524877 ARID1AO14497 2285 aa13.58□□□□□ -0.23
BEST1-203ENST00000524877 DIAPH2-AS1Q14236 149 aa13.58□□□□□ -0.23
BEST1-203ENST00000524877 CCL20P78556 96 aa13.58□□□□□ -0.24
BEST1-203ENST00000524877 ZNF106Q9H2Y7 1883 aaKnown RBP13.58□□□□□ -0.24
BEST1-203ENST00000524877 HBDP02042 147 aa13.58□□□□□ -0.24
BEST1-203ENST00000524877 LY6G6FQ5SQ64 297 aa13.58□□□□□ -0.24
BEST1-203ENST00000524877 CHCHD5Q9BSY4 110 aa13.58□□□□□ -0.24
BEST1-203ENST00000524877 F2Z2F3 143 aa13.58□□□□□ -0.24
BEST1-203ENST00000524877 DAD1P61803 113 aa13.58□□□□□ -0.24
BEST1-203ENST00000524877 RFNGQ9Y644 331 aa13.58□□□□□ -0.24
BEST1-203ENST00000524877 A0A1B0GW64 132 aa13.57□□□□□ -0.24
BEST1-203ENST00000524877 EXOC3-AS1Q8N2X6 119 aa13.57□□□□□ -0.24
BEST1-203ENST00000524877 CLPSL1A2RUU4 121 aa13.57□□□□□ -0.24
BEST1-203ENST00000524877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.57□□□□□ -0.24
BEST1-203ENST00000524877 LIME1Q9H400 295 aa13.57□□□□□ -0.24
BEST1-203ENST00000524877 C15orf62A8K5M9 175 aa13.57□□□□□ -0.24
BEST1-203ENST00000524877 ZNF134P52741 427 aa13.56□□□□□ -0.24
BEST1-203ENST00000524877 ZNF407Q9C0G0 2248 aa13.56□□□□□ -0.24
BEST1-203ENST00000524877 ZNF815PA8K554 130 aa13.56□□□□□ -0.24
BEST1-203ENST00000524877 ZFP36P26651 326 aaKnown RBP13.56□□□□□ -0.24
BEST1-203ENST00000524877 HIST2H2BCQ6DN03 193 aa13.56□□□□□ -0.24
BEST1-203ENST00000524877 SPATA31B1PQ5VZV4 182 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 ORMDL3Q8N138 153 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 WFDC11Q8NEX6 87 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 WFDC1Q9HC57 220 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 IGLC2P0DOY2 106 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 IGLC3P0DOY3 106 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 IGHV4-31P0DP07 118 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 ADCYAP1P18509 176 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 C1orf147Q96MC9 270 aaPredicted RBP13.55□□□□□ -0.24
BEST1-203ENST00000524877 A0A087WX48 190 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 TRBV7-9A0A0J9YWB2 115 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 DEFB130BP0DP73 79 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 DEFB130AP0DP74 79 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 LINC01551Q86U37 167 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 TPSG1Q9NRR2 321 aa13.55□□□□□ -0.24
BEST1-203ENST00000524877 XCL2Q9UBD3 114 aa13.54□□□□□ -0.24
BEST1-203ENST00000524877 C10orf142B7Z368 130 aa13.54□□□□□ -0.24
BEST1-203ENST00000524877 IGHV3-53P01767 116 aa13.54□□□□□ -0.24
BEST1-203ENST00000524877 RPL36AP83881 106 aaKnown RBP13.54□□□□□ -0.24
BEST1-203ENST00000524877 RPL36ALQ969Q0 106 aaKnown RBP13.54□□□□□ -0.24
BEST1-203ENST00000524877 C8orf86Q6ZUL3 223 aa13.54□□□□□ -0.24
BEST1-203ENST00000524877 SMPXQ9UHP9 88 aa13.54□□□□□ -0.24
BEST1-203ENST00000524877 IGHV7-4-1A0A0J9YVY3 117 aa13.54□□□□□ -0.24
BEST1-203ENST00000524877 STPG4Q8N801 248 aa13.54□□□□□ -0.24
BEST1-203ENST00000524877 RBMY1BA6NDE4 496 aaKnown RBP13.53□□□□□ -0.24
BEST1-203ENST00000524877 RBMY1EA6NEQ0 496 aaKnown RBP13.53□□□□□ -0.24
BEST1-203ENST00000524877 C9JAW5 83 aa13.53□□□□□ -0.24
BEST1-203ENST00000524877 H0YIZ8 118 aa13.53□□□□□ -0.24
BEST1-203ENST00000524877 RBMY1DP0C7P1 496 aaKnown RBP13.53□□□□□ -0.24
BEST1-203ENST00000524877 RBMY1A1P0DJD3 496 aaKnown RBP13.53□□□□□ -0.24
BEST1-203ENST00000524877 RBMY1CP0DJD4 496 aa13.53□□□□□ -0.24
BEST1-203ENST00000524877 PDE6HQ13956 83 aa13.53□□□□□ -0.24
BEST1-203ENST00000524877 NPBQ8NG41 125 aa13.53□□□□□ -0.24
BEST1-203ENST00000524877 ALPK2Q86TB3 2170 aa13.53□□□□□ -0.24
BEST1-203ENST00000524877 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.53□□□□□ -0.24
BEST1-203ENST00000524877 HIGD1CA8MV81 97 aa13.53□□□□□ -0.24
BEST1-203ENST00000524877 HOXD3P31249 432 aaPredicted RBP13.53□□□□□ -0.24
BEST1-203ENST00000524877 ANXA2RQ3ZCQ2 193 aa13.53□□□□□ -0.24
BEST1-203ENST00000524877 GGTLC3B5MD39 225 aa13.52□□□□□ -0.24
BEST1-203ENST00000524877 H3BMM0 161 aa13.52□□□□□ -0.24
BEST1-203ENST00000524877 UBE2WQ96B02 151 aa13.52□□□□□ -0.24
BEST1-203ENST00000524877 A0A0G2JRQ6 117 aa13.52□□□□□ -0.24
BEST1-203ENST00000524877 PPIFP30405 207 aaKnown RBP13.52□□□□□ -0.24
BEST1-203ENST00000524877 IGFL4Q6B9Z1 124 aa13.52□□□□□ -0.24
BEST1-203ENST00000524877 ANAPC10Q9UM13 185 aa13.52□□□□□ -0.24
BEST1-203ENST00000524877 PHF3Q92576 2039 aaKnown RBP13.52□□□□□ -0.24
BEST1-203ENST00000524877 ADARB2-AS1A8MUL3 147 aa13.52□□□□□ -0.25
BEST1-203ENST00000524877 IFI27L1Q96BM0 104 aa13.52□□□□□ -0.25
BEST1-203ENST00000524877 TCRAP04437 139 aa13.52□□□□□ -0.25
BEST1-203ENST00000524877 DNAJC9-AS1A6NH13 148 aa13.52□□□□□ -0.25
BEST1-203ENST00000524877 MRPL55Q7Z7F7 128 aaKnown RBP13.52□□□□□ -0.25
BEST1-203ENST00000524877 OSTCQ9NRP0 149 aa13.52□□□□□ -0.25
BEST1-203ENST00000524877 A0A1W2PPM0 123 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 INAFM1C9JVW0 142 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 M0R2P5 195 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 PPBPP02775 128 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 MLANAQ16655 118 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 F5H768 121 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 SYS1-DBNDD2H3BUS1 97 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 IFI27P40305 119 aaPredicted RBP13.51□□□□□ -0.25
BEST1-203ENST00000524877 VSIRQ9H7M9 311 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 CT83Q5H943 113 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 SIRPDQ9H106 197 aa13.51□□□□□ -0.25
BEST1-203ENST00000524877 IGHV3-73A0A0B4J1V6 119 aa13.5□□□□□ -0.25
BEST1-203ENST00000524877 MYCNOSP40205 109 aa13.5□□□□□ -0.25
BEST1-203ENST00000524877 ANKRD29Q8N6D5 301 aa13.5□□□□□ -0.25
BEST1-203ENST00000524877 RBM3P98179 157 aaKnown RBP13.5□□□□□ -0.25
BEST1-203ENST00000524877 PRB4P10163 310 aaPredicted RBP13.49□□□□□ -0.25
BEST1-203ENST00000524877 PLNP26678 52 aa13.49□□□□□ -0.25
BEST1-203ENST00000524877 LINC01559Q495D7 138 aa13.49□□□□□ -0.25
BEST1-203ENST00000524877 CHAC1Q9BUX1 264 aa13.49□□□□□ -0.25
BEST1-203ENST00000524877 RNASE7Q9H1E1 156 aaKnown RBP13.49□□□□□ -0.25
BEST1-203ENST00000524877 Q6ZRM9 215 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms