RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TCL1AP56279 114 aa17.62■□□□□ 0.41
PVT1-219ENST00000523427 ST6GAL2Q96JF0 529 aa17.62■□□□□ 0.41
PVT1-219ENST00000523427 AGPAT4-IT1Q9H0P7 198 aa17.62■□□□□ 0.41
PVT1-219ENST00000523427 PRO0255Q9UI72 69 aa17.62■□□□□ 0.41
PVT1-219ENST00000523427 HHLA3Q9XRX5 114 aa17.62■□□□□ 0.41
PVT1-219ENST00000523427 TRAV9-2A0A087WT02 112 aa17.61■□□□□ 0.41
PVT1-219ENST00000523427 RGS13O14921 159 aa17.61■□□□□ 0.41
PVT1-219ENST00000523427 MPDU1O75352 247 aa17.61■□□□□ 0.41
PVT1-219ENST00000523427 GPX1P07203 203 aa17.61■□□□□ 0.41
PVT1-219ENST00000523427 ANXA2RQ3ZCQ2 193 aa17.61■□□□□ 0.41
PVT1-219ENST00000523427 OR1L4Q8NGR5 311 aa17.61■□□□□ 0.41
PVT1-219ENST00000523427 LY96Q9Y6Y9 160 aa17.61■□□□□ 0.41
PVT1-219ENST00000523427 KLLNB2CW77 178 aa17.6■□□□□ 0.41
PVT1-219ENST00000523427 E5RGE8 158 aa17.6■□□□□ 0.41
PVT1-219ENST00000523427 CST7O76096 145 aa17.6■□□□□ 0.41
PVT1-219ENST00000523427 CRYBA4P53673 196 aa17.6■□□□□ 0.41
PVT1-219ENST00000523427 MRPL23Q16540 153 aaKnown RBP17.6■□□□□ 0.41
PVT1-219ENST00000523427 Q6ZQT7 251 aa17.6■□□□□ 0.41
PVT1-219ENST00000523427 BLNKQ8WV28 456 aa17.6■□□□□ 0.41
PVT1-219ENST00000523427 LSM5Q9Y4Y9 91 aaKnown RBP17.6■□□□□ 0.41
PVT1-219ENST00000523427 TIMM9Q9Y5J7 89 aa17.6■□□□□ 0.41
PVT1-219ENST00000523427 MYCBP2O75592 4640 aa17.6■□□□□ 0.41
PVT1-219ENST00000523427 SRRM2Q9UQ35 2752 aaKnown RBP17.59■□□□□ 0.41
PVT1-219ENST00000523427 GCSHP23434 173 aa17.59■□□□□ 0.41
PVT1-219ENST00000523427 EXOC3-AS1Q8N2X6 119 aa17.59■□□□□ 0.41
PVT1-219ENST00000523427 LINC00477Q96M19 166 aa17.59■□□□□ 0.41
PVT1-219ENST00000523427 LINC00467Q9BRT7 94 aa17.59■□□□□ 0.41
PVT1-219ENST00000523427 TRBV19A0A075B6N1 114 aa17.58■□□□□ 0.4
PVT1-219ENST00000523427 CCSO14618 274 aa17.58■□□□□ 0.4
PVT1-219ENST00000523427 CAV2P51636 162 aa17.58■□□□□ 0.4
PVT1-219ENST00000523427 NEGR1Q7Z3B1 354 aa17.58■□□□□ 0.4
PVT1-219ENST00000523427 MRPL53Q96EL3 112 aaKnown RBP17.58■□□□□ 0.4
PVT1-219ENST00000523427 PFDN5Q99471 154 aa17.58■□□□□ 0.4
PVT1-219ENST00000523427 ARPC5LQ9BPX5 153 aa17.58■□□□□ 0.4
PVT1-219ENST00000523427 MSRB1Q9NZV6 116 aa17.58■□□□□ 0.4
PVT1-219ENST00000523427 VPS13BQ7Z7G8 4022 aa17.57■□□□□ 0.4
PVT1-219ENST00000523427 PYYP10082 97 aa17.57■□□□□ 0.4
PVT1-219ENST00000523427 FHL2Q14192 279 aa17.57■□□□□ 0.4
PVT1-219ENST00000523427 PRR9Q5T870 116 aa17.57■□□□□ 0.4
PVT1-219ENST00000523427 TRIQKQ629K1 86 aa17.57■□□□□ 0.4
PVT1-219ENST00000523427 WFDC10BQ8IUB3 73 aa17.57■□□□□ 0.4
PVT1-219ENST00000523427 SLC39A9Q9NUM3 307 aa17.57■□□□□ 0.4
PVT1-219ENST00000523427 IGKV2-40A0A087WW87 121 aaPredicted RBP17.56■□□□□ 0.4
PVT1-219ENST00000523427 TRGV4A0A0C4DH28 118 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 NAP1L6A6NFF2 107 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 FAM24AA6NFZ4 105 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 FAM25EA8MYX2 175 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 FAM229AH3BQW9 127 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 ZNF253O75346 499 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 NDUFB4O95168 129 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 IGKV2D-40P01614 121 aaPredicted RBP17.56■□□□□ 0.4
PVT1-219ENST00000523427 SLAQ13239 276 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 BAK1Q16611 211 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 C12orf45Q8N5I9 185 aaPredicted RBP17.56■□□□□ 0.4
PVT1-219ENST00000523427 FAM19A4Q96LR4 140 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 UQCC1Q9NVA1 299 aa17.56■□□□□ 0.4
PVT1-219ENST00000523427 IGHV1OR15-1A0A075B7D0 117 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 UBE2L5PA0A1B0GUS4 154 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 CCDC160A6NGH7 325 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 EVI2AP22794 236 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 BAXQ07812 192 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 ZNF846Q147U1 533 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 IBA57Q5T440 356 aaKnown RBP17.55■□□□□ 0.4
PVT1-219ENST00000523427 FAM122CQ6P4D5 195 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 VGLL1Q99990 258 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 SRRQ9GZT4 340 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 PRELID1Q9Y255 219 aa17.55■□□□□ 0.4
PVT1-219ENST00000523427 SFTA3P0C7M3 94 aa17.54■□□□□ 0.4
PVT1-219ENST00000523427 HIST1H1EP10412 219 aaKnown RBP17.54■□□□□ 0.4
PVT1-219ENST00000523427 SRIP30626 198 aa17.54■□□□□ 0.4
PVT1-219ENST00000523427 SPANXN2Q5MJ10 180 aa17.54■□□□□ 0.4
PVT1-219ENST00000523427 TMEM78Q5T7P6 136 aa17.54■□□□□ 0.4
PVT1-219ENST00000523427 MITD1Q8WV92 249 aa17.54■□□□□ 0.4
PVT1-219ENST00000523427 WDR83OSQ9Y284 106 aa17.54■□□□□ 0.4
PVT1-219ENST00000523427 CRISP2P16562 243 aa17.53■□□□□ 0.4
PVT1-219ENST00000523427 ZFAND2AQ8N6M9 145 aa17.53■□□□□ 0.4
PVT1-219ENST00000523427 C20orf85Q9H1P6 137 aa17.53■□□□□ 0.4
PVT1-219ENST00000523427 AAMDCQ9H7C9 122 aa17.53■□□□□ 0.4
PVT1-219ENST00000523427 ZNF415Q09FC8 603 aa17.52■□□□□ 0.4
PVT1-219ENST00000523427 MUC21Q5SSG8 566 aa17.52■□□□□ 0.4
PVT1-219ENST00000523427 C9orf47Q6ZRZ4 202 aa17.52■□□□□ 0.4
PVT1-219ENST00000523427 PCNPQ8WW12 178 aaKnown RBP17.52■□□□□ 0.4
PVT1-219ENST00000523427 MRPL32Q9BYC8 188 aaKnown RBP17.52■□□□□ 0.4
PVT1-219ENST00000523427 K7EQD1 137 aa17.51■□□□□ 0.39
PVT1-219ENST00000523427 GYPEP15421 78 aa17.51■□□□□ 0.39
PVT1-219ENST00000523427 RPL29P47914 159 aaKnown RBP17.51■□□□□ 0.39
PVT1-219ENST00000523427 TMEM14CQ9P0S9 112 aa17.51■□□□□ 0.39
PVT1-219ENST00000523427 IGLV5-52A0A0A0MRZ9 124 aa17.5■□□□□ 0.39
PVT1-219ENST00000523427 J3QL48 77 aa17.5■□□□□ 0.39
PVT1-219ENST00000523427 GCSAMLQ5JQS6 135 aa17.5■□□□□ 0.39
PVT1-219ENST00000523427 Q6ZSN1 163 aa17.5■□□□□ 0.39
PVT1-219ENST00000523427 ZNF479Q96JC4 524 aa17.5■□□□□ 0.39
PVT1-219ENST00000523427 C5orf51A6NDU8 294 aa17.49■□□□□ 0.39
PVT1-219ENST00000523427 CENPXA8MT69 81 aa17.49■□□□□ 0.39
PVT1-219ENST00000523427 CRYGDP07320 174 aa17.49■□□□□ 0.39
PVT1-219ENST00000523427 FGF7P21781 194 aa17.49■□□□□ 0.39
PVT1-219ENST00000523427 Q8TAT8 98 aa17.49■□□□□ 0.39
PVT1-219ENST00000523427 GPN1Q9HCN4 374 aaPredicted RBP17.49■□□□□ 0.39
PVT1-219ENST00000523427 PSCAO43653 123 aa17.48■□□□□ 0.39
PVT1-219ENST00000523427 BTCP35070 178 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms