RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 C9orf47Q6ZRZ4 202 aa8.77□□□□□ -1.01
PVT1-215ENST00000522963 CYB561D1Q8N8Q1 229 aa8.77□□□□□ -1.01
PVT1-215ENST00000522963 OR4B1Q8NGF8 309 aa8.77□□□□□ -1.01
PVT1-215ENST00000522963 HIST1H2BAQ96A08 127 aa8.77□□□□□ -1.01
PVT1-215ENST00000522963 LINC00479Q96M42 142 aa8.77□□□□□ -1.01
PVT1-215ENST00000522963 TCEAL7Q9BRU2 100 aa8.77□□□□□ -1.01
PVT1-215ENST00000522963 EIF5A2Q9GZV4 153 aaKnown RBP8.77□□□□□ -1.01
PVT1-215ENST00000522963 AGPAT4-IT1Q9H0P7 198 aa8.77□□□□□ -1.01
PVT1-215ENST00000522963 TRAV8-1A0A0A6YYK1 113 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 TRAV34A0A0B4J273 112 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 SERTM2A0A1B0GWG4 89 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 A8MTW9 85 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 F6UZH7 168 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 CT45A10P0DMU9 189 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 RPL35AP18077 110 aaKnown RBP8.76□□□□□ -1.01
PVT1-215ENST00000522963 AMTNQ6UX39 209 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 C2CD4CQ8TF44 421 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 C11orf52Q96A22 123 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 SGK494Q96LW2 274 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 RCHY1Q96PM5 261 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 RETNQ9HD89 108 aa8.76□□□□□ -1.01
PVT1-215ENST00000522963 LOC102724200A0A096LPH7 203 aaPredicted RBP8.75□□□□□ -1.01
PVT1-215ENST00000522963 C9JQL5 133 aa8.75□□□□□ -1.01
PVT1-215ENST00000522963 PDE6DO43924 150 aa8.75□□□□□ -1.01
PVT1-215ENST00000522963 IGLV2-11P01706 119 aa8.75□□□□□ -1.01
PVT1-215ENST00000522963 AKR1C3P42330 323 aa8.75□□□□□ -1.01
PVT1-215ENST00000522963 LINC00322Q6ZN03 302 aaPredicted RBP8.75□□□□□ -1.01
PVT1-215ENST00000522963 Q8TAT8 98 aa8.75□□□□□ -1.01
PVT1-215ENST00000522963 LINC00477Q96M19 166 aa8.75□□□□□ -1.01
PVT1-215ENST00000522963 CLUHP3Q96NS8 147 aa8.75□□□□□ -1.01
PVT1-215ENST00000522963 AGRNO00468 2067 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 K7EQM0 130 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 SRP19P09132 144 aaKnown RBP8.74□□□□□ -1.01
PVT1-215ENST00000522963 ZNF138P52744 262 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 FXYD7P58549 80 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 FLI1Q01543 452 aaPredicted RBP8.74□□□□□ -1.01
PVT1-215ENST00000522963 PEA15Q15121 130 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 TMEM78Q5T7P6 136 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 TMEM75Q8N9X5 138 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 FAM19A4Q96LR4 140 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 SPATA25Q9BR10 227 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 TM2D3Q9BRN9 247 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 DERL1Q9BUN8 251 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 SLC35B3Q9H1N7 401 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 MED9Q9NWA0 146 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 ZNF492Q9P255 531 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 PSG8Q9UQ74 426 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 KLF12Q9Y4X4 402 aa8.74□□□□□ -1.01
PVT1-215ENST00000522963 RAB19A4D1S5 217 aa8.73□□□□□ -1.01
PVT1-215ENST00000522963 LINC00862A6NCI5 91 aa8.73□□□□□ -1.01
PVT1-215ENST00000522963 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
PVT1-215ENST00000522963 NDUFS6O75380 124 aaKnown RBP8.73□□□□□ -1.01
PVT1-215ENST00000522963 GIG44P09565 113 aaPredicted RBP8.73□□□□□ -1.01
PVT1-215ENST00000522963 TMEM183BQ1AE95 376 aa8.73□□□□□ -1.01
PVT1-215ENST00000522963 PRNTQ86SH4 94 aa8.73□□□□□ -1.01
PVT1-215ENST00000522963 TVP23CQ96ET8 276 aa8.73□□□□□ -1.01
PVT1-215ENST00000522963 FMC1Q96HJ9 113 aa8.73□□□□□ -1.01
PVT1-215ENST00000522963 ODF3Q96PU9 254 aa8.73□□□□□ -1.01
PVT1-215ENST00000522963 PPP1R14DQ9NXH3 145 aa8.73□□□□□ -1.01
PVT1-215ENST00000522963 TRBV6-1A0A0K0K1D8 114 aa8.72□□□□□ -1.01
PVT1-215ENST00000522963 FBLL1A6NHQ2 334 aaKnown RBP8.72□□□□□ -1.01
PVT1-215ENST00000522963 M0R2Z0 102 aa8.72□□□□□ -1.01
PVT1-215ENST00000522963 RPL35P42766 123 aaKnown RBP8.72□□□□□ -1.01
PVT1-215ENST00000522963 UBE2G1P62253 170 aa8.72□□□□□ -1.01
PVT1-215ENST00000522963 KIR3DS1Q14943 382 aa8.72□□□□□ -1.01
PVT1-215ENST00000522963 SPINK13Q1W4C9 94 aa8.72□□□□□ -1.01
PVT1-215ENST00000522963 MORN3Q6PF18 240 aaPredicted RBP8.72□□□□□ -1.01
PVT1-215ENST00000522963 Q86TA4 180 aa8.72□□□□□ -1.01
PVT1-215ENST00000522963 COMMD7Q86VX2 200 aa8.72□□□□□ -1.01
PVT1-215ENST00000522963 CSTL1Q9H114 145 aa8.72□□□□□ -1.01
PVT1-215ENST00000522963 TREM1Q9NP99 234 aa8.72□□□□□ -1.01
PVT1-215ENST00000522963 KIR2DL5BA0A0G2JN68 375 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 KIR2DL5BA0A0G2JPC4 375 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 J3KRW8 73 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 S100A9P06702 114 aaKnown RBP8.71□□□□□ -1.02
PVT1-215ENST00000522963 CRISP2P16562 243 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 LEPP41159 167 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 CEBPGP53567 150 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 APOC4P55056 127 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 KIR2DL5AQ8N109 375 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 ZFAND2AQ8N6M9 145 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 KIR2DL5BQ8NHK3 375 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 WWC2-AS2Q96NR7 200 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 PARLQ9H300 379 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 SMDT1Q9H4I9 107 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 LENEPQ9Y5L5 61 aa8.71□□□□□ -1.02
PVT1-215ENST00000522963 TRAV12-2A0A075B6T6 113 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 TRBV7-9A0A0J9YWB2 115 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 CRXO43186 299 aaPredicted RBP8.7□□□□□ -1.02
PVT1-215ENST00000522963 CA1P00915 261 aaPredicted RBP8.7□□□□□ -1.02
PVT1-215ENST00000522963 LTAP01374 205 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 TSPOP30536 169 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 CDKN1BP46527 198 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 TAS2R60P59551 318 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 NUTF2P61970 127 aaKnown RBP8.7□□□□□ -1.02
PVT1-215ENST00000522963 ZNF674Q2M3X9 581 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 PRR9Q5T870 116 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 IGF2BP2-AS1Q96M15 143 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 C8orf49Q96NF6 230 aa8.7□□□□□ -1.02
PVT1-215ENST00000522963 XCL2Q9UBD3 114 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms