RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 SRP19P09132 144 aaKnown RBP13.61□□□□□ -0.23
CTNNA1-213ENST00000519113 C10orf91Q5T1B1 145 aa13.61□□□□□ -0.23
CTNNA1-213ENST00000519113 LINC00305Q7Z4B0 112 aa13.61□□□□□ -0.23
CTNNA1-213ENST00000519113 S100A7AQ86SG5 101 aa13.61□□□□□ -0.23
CTNNA1-213ENST00000519113 ZNF575Q86XF7 245 aa13.61□□□□□ -0.23
CTNNA1-213ENST00000519113 UBE2DNLQ8IWF7 75 aa13.61□□□□□ -0.23
CTNNA1-213ENST00000519113 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
CTNNA1-213ENST00000519113 TMEM167BQ9NRX6 74 aa13.61□□□□□ -0.23
CTNNA1-213ENST00000519113 CARHSP1Q9Y2V2 147 aaKnown RBP13.61□□□□□ -0.23
CTNNA1-213ENST00000519113 OR7C2O60412 319 aa13.6□□□□□ -0.23
CTNNA1-213ENST00000519113 PAGE4O60829 102 aa13.6□□□□□ -0.23
CTNNA1-213ENST00000519113 ADCYAP1P18509 176 aa13.6□□□□□ -0.23
CTNNA1-213ENST00000519113 CRYBB3P26998 211 aa13.6□□□□□ -0.23
CTNNA1-213ENST00000519113 NUTF2P61970 127 aaKnown RBP13.6□□□□□ -0.23
CTNNA1-213ENST00000519113 Q6ZR54 194 aa13.6□□□□□ -0.23
CTNNA1-213ENST00000519113 DCANP1Q8TF63 244 aa13.6□□□□□ -0.23
CTNNA1-213ENST00000519113 AGRNO00468 2067 aa13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 IGLV2-18A0A075B6J9 118 aa13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 TRAV5A0A0B4J249 113 aa13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 NDUFS6O75380 124 aaKnown RBP13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 MEF2BQ02080 365 aaPredicted RBP13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 CCDC28AQ8IWP9 274 aa13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 FAM210BQ96KR6 192 aa13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 UHRF2Q96PU4 802 aa13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 TXNDC17Q9BRA2 123 aa13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 SLC25A2Q9BXI2 301 aa13.59□□□□□ -0.23
CTNNA1-213ENST00000519113 HSPG2P98160 4391 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 IL4P05112 153 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 S100A7P31151 101 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 CEBPGP53567 150 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 UBE2G2P60604 165 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 CST9LP1Q5W188 147 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 SVBPQ8N300 66 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 RNF125Q96EQ8 232 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 FAM167A-AS1Q96KT0 104 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 PAXXQ9BUH6 204 aa13.58□□□□□ -0.24
CTNNA1-213ENST00000519113 SPART-AS1P0CW21 52 aa13.57□□□□□ -0.24
CTNNA1-213ENST00000519113 PSMG4Q5JS54 123 aa13.57□□□□□ -0.24
CTNNA1-213ENST00000519113 MORN5Q5VZ52 161 aa13.57□□□□□ -0.24
CTNNA1-213ENST00000519113 CYB561D1Q8N8Q1 229 aa13.57□□□□□ -0.24
CTNNA1-213ENST00000519113 OR51M1Q9H341 326 aa13.57□□□□□ -0.24
CTNNA1-213ENST00000519113 TMEM189A5PLL7 270 aa13.56□□□□□ -0.24
CTNNA1-213ENST00000519113 HELTA6NFD8 242 aa13.56□□□□□ -0.24
CTNNA1-213ENST00000519113 UBE2L3P68036 154 aaKnown RBP13.56□□□□□ -0.24
CTNNA1-213ENST00000519113 C1orf134Q5TEV5 83 aa13.56□□□□□ -0.24
CTNNA1-213ENST00000519113 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
CTNNA1-213ENST00000519113 ZNF503Q96F45 646 aa13.56□□□□□ -0.24
CTNNA1-213ENST00000519113 SLC25A39Q9BZJ4 359 aaPredicted RBP13.56□□□□□ -0.24
CTNNA1-213ENST00000519113 XCL2Q9UBD3 114 aa13.56□□□□□ -0.24
CTNNA1-213ENST00000519113 ARL2-SNX15V9GYD0 113 aa13.56□□□□□ -0.24
CTNNA1-213ENST00000519113 F6UZH7 168 aa13.55□□□□□ -0.24
CTNNA1-213ENST00000519113 PDE6DO43924 150 aa13.55□□□□□ -0.24
CTNNA1-213ENST00000519113 SNAPINO95295 136 aa13.55□□□□□ -0.24
CTNNA1-213ENST00000519113 SNRPD3P62318 126 aaKnown RBP13.55□□□□□ -0.24
CTNNA1-213ENST00000519113 RNF212Q495C1 297 aa13.55□□□□□ -0.24
CTNNA1-213ENST00000519113 SHANK2-AS3Q9BTD1 123 aa13.55□□□□□ -0.24
CTNNA1-213ENST00000519113 RNF24Q9Y225 148 aa13.55□□□□□ -0.24
CTNNA1-213ENST00000519113 FAM74A7A6NL05 159 aa13.54□□□□□ -0.24
CTNNA1-213ENST00000519113 TMEM250H0YL14 139 aa13.54□□□□□ -0.24
CTNNA1-213ENST00000519113 OR10J4P0C629 311 aa13.54□□□□□ -0.24
CTNNA1-213ENST00000519113 NEU1Q99519 415 aa13.54□□□□□ -0.24
CTNNA1-213ENST00000519113 YTHDF2Q9Y5A9 579 aaKnown RBP13.54□□□□□ -0.24
CTNNA1-213ENST00000519113 SMIM9A6NGZ8 99 aa13.53□□□□□ -0.24
CTNNA1-213ENST00000519113 H3BRN7 92 aa13.53□□□□□ -0.24
CTNNA1-213ENST00000519113 CDK2AP2O75956 126 aa13.53□□□□□ -0.24
CTNNA1-213ENST00000519113 PYYP10082 97 aa13.53□□□□□ -0.24
CTNNA1-213ENST00000519113 ATP5G3P48201 142 aa13.53□□□□□ -0.24
CTNNA1-213ENST00000519113 USF2Q15853 346 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-213ENST00000519113 TMEM14CQ9P0S9 112 aa13.53□□□□□ -0.24
CTNNA1-213ENST00000519113 U3KQE9 123 aa13.53□□□□□ -0.24
CTNNA1-213ENST00000519113 TEX48A0A1B0GUV7 120 aa13.52□□□□□ -0.25
CTNNA1-213ENST00000519113 A0A1W2PRE2 83 aa13.52□□□□□ -0.25
CTNNA1-213ENST00000519113 H3BMM0 161 aa13.52□□□□□ -0.25
CTNNA1-213ENST00000519113 EMP1P54849 157 aa13.52□□□□□ -0.25
CTNNA1-213ENST00000519113 C16orf54Q6UWD8 224 aa13.52□□□□□ -0.25
CTNNA1-213ENST00000519113 ZNF705AQ6ZN79 300 aaPredicted RBP13.52□□□□□ -0.25
CTNNA1-213ENST00000519113 FXYD5Q96DB9 178 aa13.52□□□□□ -0.25
CTNNA1-213ENST00000519113 C16orf90A8MZG2 172 aa13.51□□□□□ -0.25
CTNNA1-213ENST00000519113 FAM74A3Q4VXF1 159 aa13.51□□□□□ -0.25
CTNNA1-213ENST00000519113 GLMPQ8WWB7 406 aa13.51□□□□□ -0.25
CTNNA1-213ENST00000519113 NKX6-2Q9C056 277 aaPredicted RBP13.51□□□□□ -0.25
CTNNA1-213ENST00000519113 ZNF98A6NK75 572 aa13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 ZNF727A8MUV8 499 aa13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 ZNF705FA8MVS1 300 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 M0R036 132 aa13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 ZNF705DP0CH99 300 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 ZNF705BP0CI00 300 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 BPIFA4PQ86YQ2 179 aa13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 MAPKAPK5-AS1Q8N8E1 139 aa13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 CLRN3Q8NCR9 226 aa13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 RPUSD4Q96CM3 377 aaKnown RBP13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 NIPSNAP3BQ9BS92 247 aa13.5□□□□□ -0.25
CTNNA1-213ENST00000519113 H3BQ15 152 aa13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 SCO1O75880 301 aa13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 NBEAP1P0C6P0 100 aa13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 HIST1H1EP10412 219 aaKnown RBP13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 HLA-DRB4P13762 266 aa13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 ZNF674Q2M3X9 581 aa13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 ATRAIDQ6UW56 229 aa13.49□□□□□ -0.25
CTNNA1-213ENST00000519113 TVP23CQ96ET8 276 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms